Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01108 Eucalyptus grandis HOM05D000101 ORTHO05D020602 3.9e-76 288.1 151 100.0
Eucgr.F01115 Eucalyptus grandis HOM05D000101 ORTHO05D020602 1.1e-27 127.1 100 67.0
Eucgr.L01150 Eucalyptus grandis HOM05D000101 ORTHO05D020602 1.8e-25 119.8 100 65.0
Eucgr.F01111 Eucalyptus grandis HOM05D000101 ORTHO05D020602 2.4e-25 119.4 100 65.0
Eucgr.L01149 Eucalyptus grandis HOM05D000101 ORTHO05D020602 1.2e-24 117.1 89 69.7
Eucgr.F01106 Eucalyptus grandis HOM05D000101 ORTHO05D020602 1.3e-23 113.6 121 53.7
Eucgr.F01101 Eucalyptus grandis HOM05D000101 ORTHO05D000089 6.7e-12 74.7 77 54.5
MBI02_g35906_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.7e-11 70.9 107 36.4
Dinv29328 Davidia involucrata HOM05D000101 ORTHO05D000089 2.2e-10 69.7 99 37.4
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 4.8e-10 68.6 110 31.8
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 4.8e-10 68.6 101 37.6
AUR62030791 Chenopodium quinoa HOM05D000101 ORTHO05D000089 8.2e-10 67.8 104 38.5
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 1.1e-09 67.4 136 33.1
AUR62030502 Chenopodium quinoa HOM05D000101 ORTHO05D000089 1.8e-09 66.6 98 35.7
Dinv01411 Davidia involucrata HOM05D000101 ORTHO05D000089 1.8e-09 66.6 101 35.6
Oeu042917.1 Olea europaea HOM05D000101 ORTHO05D000089 2.4e-09 66.2 101 35.6
Dinv15030 Davidia involucrata HOM05D000101 ORTHO05D000089 3.1e-09 65.9 99 36.4
Cfa020510 Carpinus fangiana HOM05D000101 ORTHO05D000089 5.3e-09 65.1 101 33.7
Haze_09523 Corylus avellana HOM05D000101 ORTHO05D000089 7.0e-09 64.7 101 34.7
Duzib268G0039 Durio zibethinus HOM05D000101 ORTHO05D000089 7.0e-09 64.7 111 36.9
Duzib268G1886 Durio zibethinus HOM05D000101 ORTHO05D000089 9.1e-09 64.3 111 35.1
QL08p018598 Quercus lobata HOM05D000101 ORTHO05D000089 9.1e-09 64.3 100 36.0
Dinv24616 Davidia involucrata HOM05D000101 ORTHO05D000089 1.2e-08 63.9 99 36.4
Duzib268G1640 Durio zibethinus HOM05D000101 ORTHO05D000089 1.2e-08 63.9 111 35.1
QL08p018687 Quercus lobata HOM05D000101 ORTHO05D000089 1.2e-08 63.9 100 37.0
QL93p2023_0071 Quercus lobata HOM05D000101 ORTHO05D000089 1.2e-08 63.9 100 36.0
QL08p019038 Quercus lobata HOM05D000101 ORTHO05D000089 1.6e-08 63.5 103 35.0
Actinidia19992 Actinidia chinensis HOM05D000101 ORTHO05D000089 2.0e-08 63.2 110 35.5
AUR62034231 Chenopodium quinoa HOM05D000101 ORTHO05D000089 2.7e-08 62.8 98 37.8
Actinidia05169 Actinidia chinensis HOM05D000101 ORTHO05D000089 3.5e-08 62.4 112 36.6
Actinidia19989 Actinidia chinensis HOM05D000101 ORTHO05D000089 3.5e-08 62.4 110 35.5
Duzib268G1134 Durio zibethinus HOM05D000101 ORTHO05D000089 3.5e-08 62.4 111 36.0
Rhsim11G0146700 Rhododendron simsii HOM05D000101 ORTHO05D000089 4.5e-08 62.0 102 34.3
Actinidia05167 Actinidia chinensis HOM05D000101 ORTHO05D000089 5.9e-08 61.6 110 35.5
QL08p018373 Quercus lobata HOM05D000101 ORTHO05D000089 5.9e-08 61.6 100 36.0
vmacro16169 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 7.7e-08 61.2 106 35.8
Thecc.07G062100 Theobroma cacao HOM05D000101 ORTHO05D000089 1.0e-07 60.8 106 33.0
Actinidia05166 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.3e-07 60.5 110 38.2
Ah.06g184750 Amaranthus hybridus HOM05D000101 ORTHO05D000089 1.7e-07 60.1 107 33.6
CSS0033817 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 2.2e-07 59.7 115 31.3
Thecc.07G061100 Theobroma cacao HOM05D000101 ORTHO05D000089 2.2e-07 59.7 130 29.2
Thecc.07G060300 Theobroma cacao HOM05D000101 ORTHO05D000089 2.9e-07 59.3 106 33.0
Eucgr.F03325 Eucalyptus grandis HOM05D000101 ORTHO05D000089 5.0e-07 58.5 100 35.0
Dinv15018 Davidia involucrata HOM05D000101 ORTHO05D000089 6.5e-07 58.2 99 34.3
Hma1.2p1_0435F.1_g152400 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 6.5e-07 58.2 105 35.2
Thecc.07G060900 Theobroma cacao HOM05D000101 ORTHO05D000089 6.5e-07 58.2 104 31.7
Thecc.07G078600 Theobroma cacao HOM05D000101 ORTHO05D000089 6.5e-07 58.2 139 30.2
Nitab4.5_0005335g0050 Nicotiana tabacum HOM05D000101 ORTHO05D000089 8.5e-07 57.8 102 29.4
Migut.D01705 Erythranthe guttata HOM05D000101 ORTHO05D000089 1.1e-06 57.4 107 30.8
Rhsim11G0147100 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.5e-06 57.0 107 31.8
Eucgr.F03324 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.9e-06 56.6 96 35.4
MBI18_g24213_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.9e-06 56.6 101 32.7
CSS0035156 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 2.5e-06 56.2 120 33.3
Hma1.2p1_1373F.1_g278750 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 2.5e-06 56.2 137 29.2
Hma1.2p1_2663F.1_g326426 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 2.5e-06 56.2 137 29.2
CSS0041386 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 3.2e-06 55.8 120 33.3
Oeu059288.1 Olea europaea HOM05D000101 ORTHO05D000089 3.2e-06 55.8 100 33.0
MBI11_g05438_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.2e-06 55.5 108 33.3
Cc00_g02130 Coffea canephora HOM05D000101 ORTHO05D000089 5.5e-06 55.1 101 30.7
Duzib213G0162 Durio zibethinus HOM05D000101 ORTHO05D000089 5.5e-06 55.1 102 34.3
Oeu059280.1 Olea europaea HOM05D000101 ORTHO05D000089 5.5e-06 55.1 102 32.4
Gohir.D11G296744 Gossypium hirsutum HOM05D000101 ORTHO05D000089 7.2e-06 54.7 102 31.4
Gorai.007G321000 Gossypium raimondii HOM05D000101 ORTHO05D000089 7.2e-06 54.7 102 31.4
MBI11_g05444_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 7.2e-06 54.7 108 32.4
QL02p080444 Quercus lobata HOM05D000101 ORTHO05D000089 7.2e-06 54.7 123 30.1
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 7.2e-06 54.7 116 28.4
Thecc.07G058100 Theobroma cacao HOM05D000101 ORTHO05D000089 7.2e-06 54.7 129 27.1
Thecc.07G137400 Theobroma cacao HOM05D000101 ORTHO05D000089 7.2e-06 54.7 102 29.4
MSTRG.4481 Avicennia marina HOM05D000101 ORTHO05D000089 9.4e-06 54.3 105 32.4
Gohir.D11G296664 Gossypium hirsutum HOM05D000101 ORTHO05D000089 9.4e-06 54.3 102 31.4
Peaxi162Scf00264g00823 Petunia axillaris HOM05D000101 ORTHO05D000089 9.4e-06 54.3 101 27.7
SalBow1G6976 Salvia bowleyana HOM05D000101 ORTHO05D014079 9.4e-06 54.3 110 29.1
SalBow7G0315 Salvia bowleyana HOM05D000101 ORTHO05D000089 9.4e-06 54.3 107 29.9


User provided reference genes

Program Settings