Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01106 Eucalyptus grandis HOM05D000101 ORTHO05D020602 2.1e-75 285.8 162 100.0
Eucgr.F01115 Eucalyptus grandis HOM05D000101 ORTHO05D020602 1.7e-40 169.9 135 63.0
Eucgr.L01150 Eucalyptus grandis HOM05D000101 ORTHO05D020602 2.2e-40 169.5 135 64.4
Eucgr.F01111 Eucalyptus grandis HOM05D000101 ORTHO05D020602 1.8e-39 166.4 135 63.0
Eucgr.F01101 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.1e-31 140.6 95 73.7
Eucgr.L01149 Eucalyptus grandis HOM05D000101 ORTHO05D020602 1.8e-26 123.2 126 53.2
Eucgr.F01108 Eucalyptus grandis HOM05D000101 ORTHO05D020602 7.5e-25 117.9 121 53.7
QL08p018598 Quercus lobata HOM05D000101 ORTHO05D000089 4.8e-16 88.6 157 33.1
QL93p2023_0071 Quercus lobata HOM05D000101 ORTHO05D000089 6.3e-16 88.2 157 33.1
QL08p018687 Quercus lobata HOM05D000101 ORTHO05D000089 1.4e-15 87.0 157 33.1
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 7.0e-15 84.7 149 30.2
QL08p018373 Quercus lobata HOM05D000101 ORTHO05D000089 7.0e-15 84.7 157 32.5
Ciclev10027601m.g Citrus clementina HOM05D000101 ORTHO05D000089 9.1e-15 84.3 139 30.9
Thecc.07G137400 Theobroma cacao HOM05D000101 ORTHO05D000089 1.3e-13 80.5 141 30.5
Duzib268G0039 Durio zibethinus HOM05D000101 ORTHO05D000089 3.8e-13 79.0 137 33.6
CSS0033817 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 6.5e-13 78.2 139 33.1
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 8.5e-13 77.8 151 29.1
Thecc.07G072300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.5e-12 77.0 141 29.8
Duzib268G1134 Durio zibethinus HOM05D000101 ORTHO05D000089 1.9e-12 76.6 137 32.8
Duzib268G1640 Durio zibethinus HOM05D000101 ORTHO05D000089 1.9e-12 76.6 137 30.7
PGR083G2511 Punica granatum HOM05D000101 ORTHO05D000089 1.9e-12 76.6 91 38.5
QL02p080444 Quercus lobata HOM05D000101 ORTHO05D000089 5.5e-12 75.1 139 30.9
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 7.2e-12 74.7 136 28.7
Duzib268G1886 Durio zibethinus HOM05D000101 ORTHO05D000089 7.2e-12 74.7 137 31.4
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 1.6e-11 73.6 136 28.7
Dinv29328 Davidia involucrata HOM05D000101 ORTHO05D000089 1.6e-11 73.6 138 28.3
Thecc.07G057800 Theobroma cacao HOM05D000101 ORTHO05D000089 2.7e-11 72.8 141 28.4
Eucgr.F03325 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.6e-11 72.4 102 36.3
CSS0041386 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 6.1e-11 71.6 150 31.3
Thecc.07G072400 Theobroma cacao HOM05D000101 ORTHO05D000089 6.1e-11 71.6 141 29.1
Dinv24616 Davidia involucrata HOM05D000101 ORTHO05D000089 8.0e-11 71.2 139 30.2
Duzib170G0171 Durio zibethinus HOM05D000101 ORTHO05D000089 8.0e-11 71.2 139 29.5
COL.COLO4_17455 Corchorus olitorius HOM05D000101 ORTHO05D000089 1.0e-10 70.9 141 28.4
Thecc.03G040300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.0e-10 70.9 139 30.9
Duzib213G1018 Durio zibethinus HOM05D000101 ORTHO05D000089 1.4e-10 70.5 137 29.2
Thecc.07G062100 Theobroma cacao HOM05D000101 ORTHO05D000089 1.4e-10 70.5 141 27.7
Actinidia19989 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.8e-10 70.1 149 28.2
Actinidia19992 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.8e-10 70.1 149 29.5
Thecc.07G060000 Theobroma cacao HOM05D000101 ORTHO05D000089 2.3e-10 69.7 141 27.0
Thecc.07G061100 Theobroma cacao HOM05D000101 ORTHO05D000089 2.3e-10 69.7 141 27.7
CSS0035156 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 3.0e-10 69.3 158 30.4
Thecc.07G060700 Theobroma cacao HOM05D000101 ORTHO05D000089 3.0e-10 69.3 141 27.0
Duzib213G0318 Durio zibethinus HOM05D000101 ORTHO05D000089 4.0e-10 68.9 100 32.0
MBI02_g35906_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.0e-10 68.9 139 28.1
MBI11_g25045_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 5.2e-10 68.6 142 33.1
Actinidia05169 Actinidia chinensis HOM05D000101 ORTHO05D000089 6.8e-10 68.2 149 29.5
Thecc.07G060900 Theobroma cacao HOM05D000101 ORTHO05D000089 6.8e-10 68.2 141 27.7
Duzib187G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 8.8e-10 67.8 165 28.5
MBI11_g03776_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 8.8e-10 67.8 143 30.1
Thecc.07G137200 Theobroma cacao HOM05D000101 ORTHO05D000089 8.8e-10 67.8 141 25.5
vmacro16169 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 8.8e-10 67.8 162 30.2
Actinidia05166 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.2e-09 67.4 149 30.2
Duzib213G0389 Durio zibethinus HOM05D000101 ORTHO05D000089 1.2e-09 67.4 137 27.7
MBI18_g24213_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.2e-09 67.4 147 28.6
Thecc.07G060300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-09 67.4 141 27.7
QL05p057340 Quercus lobata HOM05D000101 ORTHO05D000089 1.5e-09 67.0 149 28.2
Thecc.07G142200 Theobroma cacao HOM05D000101 ORTHO05D000089 1.5e-09 67.0 140 29.3
CSS0039663 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 2.6e-09 66.2 139 30.2
Duzib213G0916 Durio zibethinus HOM05D000101 ORTHO05D000089 2.6e-09 66.2 100 32.0
QL08p019038 Quercus lobata HOM05D000101 ORTHO05D000089 2.6e-09 66.2 143 26.6
Actinidia05167 Actinidia chinensis HOM05D000101 ORTHO05D000089 3.4e-09 65.9 145 27.6
MBI11_g05444_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.4e-09 65.9 143 28.7
CSS0004355 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 5.7e-09 65.1 139 28.8
Duzib213G0162 Durio zibethinus HOM05D000101 ORTHO05D000089 5.7e-09 65.1 101 35.6
Gohir.A11G282799 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.7e-09 65.1 100 30.0
Gohir.D11G296664 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.7e-09 65.1 139 27.3
Phvul.005G087100 Phaseolus vulgaris HOM05D000101 ORTHO05D000089 7.5e-09 64.7 151 26.5
Gorai.007G321100 Gossypium raimondii HOM05D000101 ORTHO05D000089 9.8e-09 64.3 100 30.0
Thecc.07G058100 Theobroma cacao HOM05D000101 ORTHO05D000089 9.8e-09 64.3 165 26.7
Dinv28026 Davidia involucrata HOM05D000101 ORTHO05D013107 1.3e-08 63.9 74 45.9
Thecc.07G078900 Theobroma cacao HOM05D000101 ORTHO05D000089 1.3e-08 63.9 100 30.0
Dinv10264 Davidia involucrata HOM05D000101 ORTHO05D000089 2.2e-08 63.2 136 27.9
Duzib213G0124 Durio zibethinus HOM05D000101 ORTHO05D000089 2.2e-08 63.2 100 31.0
Gohir.D11G296744 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.2e-08 63.2 139 26.6
Gorai.007G321000 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.2e-08 63.2 139 26.6
Gorai.011G072400 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.2e-08 63.2 102 27.5
MBI11_g05445_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.2e-08 63.2 141 27.0
Thecc.07G078600 Theobroma cacao HOM05D000101 ORTHO05D000089 2.2e-08 63.2 151 24.5
Gohir.D01G036500 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.8e-08 62.8 102 30.4
Thecc.07G077900 Theobroma cacao HOM05D000101 ORTHO05D000089 2.8e-08 62.8 137 27.0
Thecc.07G078200 Theobroma cacao HOM05D000101 ORTHO05D000089 2.8e-08 62.8 135 25.9
CSS0020769 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 3.7e-08 62.4 158 27.8
Duzib238G0002 Durio zibethinus HOM05D000101 ORTHO05D000089 3.7e-08 62.4 138 26.8
Manes.03G114816 Manihot esculenta HOM05D000101 ORTHO05D000089 3.7e-08 62.4 138 27.5
Aqoxy6G02631 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 4.9e-08 62.0 147 29.3
Gohir.D01G058200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.9e-08 62.0 102 31.4
SalBow7G0315 Salvia bowleyana HOM05D000101 ORTHO05D000089 4.9e-08 62.0 148 30.4
Gohir.A11G282900 Gossypium hirsutum HOM05D000101 ORTHO05D000089 6.3e-08 61.6 139 25.9
CSS0008325 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 8.3e-08 61.2 139 28.1
Gorai.002G079000 Gossypium raimondii HOM05D000101 ORTHO05D000089 8.3e-08 61.2 102 31.4
QL08p018471 Quercus lobata HOM05D000101 ORTHO05D000089 8.3e-08 61.2 101 26.7
Gohir.A11G282600 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.1e-07 60.8 137 24.1
MBI11_g05452_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.1e-07 60.8 143 27.3
vmacro04727 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 1.1e-07 60.8 138 29.0
Migut.D01682 Erythranthe guttata HOM05D000101 ORTHO05D000089 1.4e-07 60.5 130 30.8
MBI11_g05438_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.8e-07 60.1 142 28.2
MBI11_g25849_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.8e-07 60.1 142 28.2
Gorai.007G320900 Gossypium raimondii HOM05D000101 ORTHO05D000089 3.1e-07 59.3 147 26.5
MBI11_g13896_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.1e-07 59.3 145 28.3
MBI11_g25854_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.1e-07 59.3 143 27.3
MBI11_g42046_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.1e-07 59.3 145 28.3
Thecc.07G078300 Theobroma cacao HOM05D000101 ORTHO05D000089 3.1e-07 59.3 159 24.5
Gorai.007G320100 Gossypium raimondii HOM05D000101 ORTHO05D000089 4.1e-07 58.9 137 24.1
Thecc.07G078500 Theobroma cacao HOM05D000101 ORTHO05D000089 4.1e-07 58.9 151 24.5
Duzib213G0867 Durio zibethinus HOM05D000101 ORTHO05D000089 5.4e-07 58.5 100 33.0
Gohir.A01G071300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.4e-07 58.5 102 30.4
Gohir.D11G296616 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.4e-07 58.5 100 31.0
Gohir.D11G296632 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.4e-07 58.5 137 24.1
Gorai.007G319900 Gossypium raimondii HOM05D000101 ORTHO05D000089 5.4e-07 58.5 100 31.0
Rhsim11G0146700 Rhododendron simsii HOM05D000101 ORTHO05D000089 5.4e-07 58.5 137 25.5
Ah.06g184750 Amaranthus hybridus HOM05D000101 ORTHO05D000089 9.2e-07 57.8 154 25.3
AUR62034231 Chenopodium quinoa HOM05D000101 ORTHO05D000089 9.2e-07 57.8 152 27.0
MBI11_g25856_MAGBIO Magnolia biondii HOM05D001013 ORTHO05D001703 9.2e-07 57.8 132 31.1
Thecc.07G137600 Theobroma cacao HOM05D000101 ORTHO05D000089 9.2e-07 57.8 161 27.3
Gohir.D11G296704 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.0e-06 56.6 99 27.3
CAN.G1963.5 Capsicum annuum HOM05D000101 ORTHO05D000089 2.7e-06 56.2 148 27.0
Gorai.007G320500 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.7e-06 56.2 99 27.3
Rhsim11G0147100 Rhododendron simsii HOM05D000101 ORTHO05D000089 3.5e-06 55.8 141 27.0
AUR62030791 Chenopodium quinoa HOM05D000101 ORTHO05D000089 5.9e-06 55.1 100 31.0
COL.COLO4_16254 Corchorus olitorius HOM05D000101 ORTHO05D000089 5.9e-06 55.1 105 28.6
MBI11_g05461_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 5.9e-06 55.1 133 27.8
Dinv15018 Davidia involucrata HOM05D000101 ORTHO05D000089 7.7e-06 54.7 104 28.8
Dinv24581 Davidia involucrata HOM05D000101 ORTHO05D000089 7.7e-06 54.7 141 27.0


User provided reference genes

Program Settings