Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01078 Eucalyptus grandis HOM05D007566 ORTHO05D009505 2.9e-66 255.4 155 100.0
PGR083G0896 Punica granatum HOM05D007566 ORTHO05D009505 9.0e-20 100.9 101 59.4
Duzib213G0757 Durio zibethinus HOM05D007566 ORTHO05D009505 7.6e-19 97.8 101 57.4
CiPaw.11G176600 Carya illinoinensis HOM05D007566 ORTHO05D009505 1.3e-18 97.1 101 57.4
Potri.001G406900 Populus trichocarpa HOM05D007566 ORTHO05D009505 2.9e-18 95.9 101 61.4
CANSAT11G1965 Cannabis sativa HOM05D007566 ORTHO05D009505 4.2e-17 92.0 101 55.4
Thecc.07G071100 Theobroma cacao HOM05D007566 ORTHO05D009505 4.2e-17 92.0 101 55.4
MD11G1237100 Malus domestica HOM05D007566 ORTHO05D009505 7.1e-17 91.3 101 57.4
FvH4_3g21000 Fragaria vesca HOM05D007566 ORTHO05D009505 1.2e-16 90.5 101 57.4
FAN11G3987 Fragaria x ananassa HOM05D007566 ORTHO05D009505 1.2e-16 90.5 101 57.4
Prupe.4G190300 Prunus persica HOM05D007566 ORTHO05D009505 1.6e-16 90.1 101 58.4
TWI39G1107 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 2.7e-16 89.4 101 60.4
COL.COLO4_09480 Corchorus olitorius HOM05D007566 ORTHO05D009505 3.5e-16 89.0 101 52.5
Sabra16G0268300 Salix brachista HOM05D007566 ORTHO05D009505 4.6e-16 88.6 101 58.4
Sabra16G0270600 Salix brachista HOM05D007566 ORTHO05D009505 4.6e-16 88.6 101 58.4
Ciclev10010014m.g Citrus clementina HOM05D007566 ORTHO05D009505 6.1e-16 88.2 101 55.4
Lalb_Chr25g0286741 Lupinus albus HOM05D007566 ORTHO05D009505 7.9e-16 87.8 102 52.0
MELO3C016554.2 Cucumis melo HOM05D007566 ORTHO05D009505 1.0e-15 87.4 101 54.5
Manes.15G083200 Manihot esculenta HOM05D007566 ORTHO05D009505 1.0e-15 87.4 101 56.4
FAN25G3649 Fragaria x ananassa HOM05D007566 ORTHO05D009505 1.3e-15 87.0 101 55.4
Glyma.12G219500 Glycine max HOM05D007566 ORTHO05D009505 1.3e-15 87.0 102 52.9
Atru.chr2.2863 Acer truncatum HOM05D007566 ORTHO05D009505 1.8e-15 86.7 101 57.4
Psat5g246560 Pisum sativum HOM05D007566 ORTHO05D009505 1.8e-15 86.7 102 54.9
CsaV3_3G005960 Cucumis sativus L. HOM05D007566 ORTHO05D009505 3.0e-15 85.9 101 53.5
RcHm_v2.0_Chr5g0035981 Rosa chinensis HOM05D007566 ORTHO05D009505 5.1e-15 85.1 101 55.4
Glyma.13G281800 Glycine max HOM05D007566 ORTHO05D009505 8.7e-15 84.3 102 51.0
TAR627G0519 Trochodendron aralioides HOM05D007566 ORTHO05D009505 1.1e-14 84.0 101 51.5
arahy.Tifrunner.gnm1.ann1.MQ63GR Arachis hypogaea HOM05D007566 ORTHO05D009505 2.5e-14 82.8 109 52.3
Medtr2g080990 Medicago truncatula HOM05D007566 ORTHO05D009505 4.3e-14 82.0 104 51.9
TPR.G32847 Trifolium pratense HOM05D007566 ORTHO05D009505 4.3e-14 82.0 102 52.0
Gohir.D01G055900 Gossypium hirsutum HOM05D007566 ORTHO05D009505 9.7e-14 80.9 101 57.4
Aa31LG5G10140 Aethionema arabicum HOM05D007566 ORTHO05D009505 1.6e-13 80.1 104 52.9
Dinv08341 Davidia involucrata HOM05D007566 ORTHO05D009505 2.2e-13 79.7 99 52.5
Lj3g0013461 Lotus japonicus HOM05D007566 ORTHO05D009505 2.2e-13 79.7 101 51.5
Phvul.005G086000 Phaseolus vulgaris HOM05D007566 ORTHO05D009505 2.2e-13 79.7 102 50.0
Migut.M01859 Erythranthe guttata HOM05D007566 ORTHO05D009505 2.8e-13 79.3 102 50.0
Cpa.g.sc389.3 Carica papaya HOM05D007566 ORTHO05D009505 3.7e-13 79.0 101 52.5
EL10Ac4g08058 Beta vulgaris HOM05D007566 ORTHO05D009505 4.8e-13 78.6 103 49.5
Gorai.002G076000 Gossypium raimondii HOM05D007566 ORTHO05D009505 4.8e-13 78.6 101 56.4
Actinidia39409 Actinidia chinensis HOM05D007566 ORTHO05D009505 6.3e-13 78.2 102 57.8
GSVIVG01014436001 Vitis vinifera HOM05D007566 ORTHO05D009505 6.3e-13 78.2 104 52.9
arahy.Tifrunner.gnm1.ann1.YDUQ9T Arachis hypogaea HOM05D007566 ORTHO05D009505 8.2e-13 77.8 109 50.5
Gohir.A01G068600 Gossypium hirsutum HOM05D007566 ORTHO05D009505 8.2e-13 77.8 101 56.4
TAR371G0602 Trochodendron aralioides HOM05D007566 ORTHO05D009505 1.4e-12 77.0 102 50.0
ClCG10G006500 Citrullus lanatus HOM05D007566 ORTHO05D009505 2.4e-12 76.3 101 51.5
FAN21G0859 Fragaria x ananassa HOM05D007566 ORTHO05D009505 2.4e-12 76.3 101 60.4
Nitab4.5_0000297g0110 Nicotiana tabacum HOM05D007566 ORTHO05D009505 2.4e-12 76.3 101 52.5
PSO541G1909 Papaver somniferum HOM05D007566 ORTHO05D009505 2.4e-12 76.3 103 51.5
Rhsim06G0192900 Rhododendron simsii HOM05D007566 ORTHO05D009505 2.4e-12 76.3 103 51.5
DCAR_009984 Daucus carota HOM05D007566 ORTHO05D009505 6.9e-12 74.7 104 51.0
BraA01t01804Z Brassica rapa HOM05D007566 ORTHO05D009505 1.2e-11 73.9 104 51.0
Oeu030434.1 Olea europaea HOM05D007566 ORTHO05D009505 1.5e-11 73.6 105 49.5
Nn1g03914 Nelumbo nucifera HOM05D007566 ORTHO05D009505 2.6e-11 72.8 101 59.4
SGA_v2.0_scaffold73G24317 Striga asiatica HOM05D007566 ORTHO05D009505 2.6e-11 72.8 120 44.2
Ah.04g165410 Amaranthus hybridus HOM05D007566 ORTHO05D009505 3.4e-11 72.4 101 45.5
HanXRQChr05g0151621 Helianthus annuus HOM05D007566 ORTHO05D009505 4.5e-11 72.0 101 48.5
BcaNung07200 Brassica carinata HOM05D007566 ORTHO05D009505 5.9e-11 71.6 105 50.5
C01p23510 Brassica napus HOM05D007566 ORTHO05D009505 5.9e-11 71.6 105 50.5
BolC1t02296H Brassica oleracea HOM05D007566 ORTHO05D009505 5.9e-11 71.6 105 50.5
THA.LOC104811846 Tarenaya hassleriana HOM05D007566 ORTHO05D009505 5.9e-11 71.6 102 47.1
Cc05_g12690 Coffea canephora HOM05D007566 ORTHO05D009505 7.7e-11 71.2 103 50.5
A01p18560 Brassica napus HOM05D007566 ORTHO05D009505 1.0e-10 70.9 107 48.6
PSO675G4296 Papaver somniferum HOM05D007566 ORTHO05D009505 1.0e-10 70.9 103 49.5
ECA246G4377 Erigeron canadensis HOM05D007566 ORTHO05D009505 1.3e-10 70.5 103 51.5
Nitab4.5_0008686g0030 Nicotiana tabacum HOM05D007566 ORTHO05D009505 1.3e-10 70.5 101 60.4
Hma1.2p1_3251F.1_g334500 Hydrangea macrophylla HOM05D007566 ORTHO05D009505 2.2e-10 69.7 106 48.1
Zm00001eb106900 Zea mays HOM05D007566 ORTHO05D009505 8.5e-10 67.8 111 45.9
Sp7g25310 Schrenkiella parvula HOM05D007566 ORTHO05D009505 1.1e-09 67.4 104 49.0
Aqoxy1G02746 Aquilegia oxysepala HOM05D007566 ORTHO05D009505 1.9e-09 66.6 107 46.7
Hund23375 Selenicereus undatus HOM05D007566 ORTHO05D009505 3.2e-09 65.9 104 44.2
CDE05G3101 Ceratophyllum demersum HOM05D007566 ORTHO05D009505 5.5e-09 65.1 102 42.2
Lsat_1_v5_gn_5_6820 Lactuca sativa HOM05D007566 ORTHO05D009505 5.5e-09 65.1 102 51.0
Solyc07g063575.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 1.2e-08 63.9 102 51.0
Sopen07g031760 Solanum pennellii HOM05D007566 ORTHO05D009505 1.2e-08 63.9 102 51.0
PGSC0003DMG401019249 Solanum tuberosum HOM05D007566 ORTHO05D009505 4.6e-08 62.0 101 46.5
Solyc10g047330.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 1.8e-07 60.1 102 63.7
CARHR235050 Cardamine hirsuta HOM05D007566 ORTHO05D009505 2.3e-07 59.7 104 43.3
MSTRG.15205 Avicennia marina HOM05D007566 ORTHO05D009505 5.1e-07 58.5 104 43.3
Sc16g0006770 Simmondsia chinensis HOM05D007566 ORTHO05D009505 6.7e-07 58.2 101 43.6
Peaxi162Scf01216g00052 Petunia axillaris HOM05D007566 ORTHO05D009505 1.5e-06 57.0 101 58.4
unitig_0.g2051 Utricularia gibba HOM05D007566 ORTHO05D009505 2.0e-06 56.6 106 38.7
TWI38G1712 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 2.5e-06 56.2 188 31.4
GSVIVG01014434001 Vitis vinifera HOM05D007566 ORTHO05D009505 4.3e-06 55.5 75 54.7


User provided reference genes

Program Settings