Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 4.2e-104 381.3 187 100.0
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 88.8
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 88.8
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 88.8
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 88.8
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 89.8
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 88.2
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 88.2
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 88.2
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 89.3
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 89.3
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 89.3
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 87.7
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.8e-94 349.4 183 91.3
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 88.8
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 88.8
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 88.8
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.8
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 87.7
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 88.8
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 88.8
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 1.5e-93 346.3 186 89.2
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 88.8
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 88.2
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 88.2
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 88.2
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 5.7e-93 344.4 187 87.7
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 7.4e-93 344.0 184 89.1
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 87.7
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 88.2
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 88.8
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 87.7
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 88.2
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 9.6e-93 343.6 200 83.0
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 87.2
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 87.2
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 87.7
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 87.2
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.6e-92 342.8 182 89.0
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 87.2
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 87.2
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 87.2
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.7
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 86.6
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 86.6
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 87.2
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 86.1
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 87.2
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.2
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.2
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.2
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.2
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 4.8e-92 341.3 187 87.2
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 6.2e-92 340.9 187 87.7
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 6.2e-92 340.9 187 87.2
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 6.2e-92 340.9 182 87.4
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 6.2e-92 340.9 182 87.9
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 6.2e-92 340.9 187 86.6
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 86.1
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 87.7
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 87.2
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 87.2
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 8.2e-92 340.5 187 86.6
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 1.1e-91 340.1 182 88.5
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 1.1e-91 340.1 193 86.5
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 85.6
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.4e-91 339.7 187 86.1
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.8e-91 339.3 187 87.2
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.8e-91 339.3 169 97.6
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 1.8e-91 339.3 187 86.6
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 1.8e-91 339.3 187 86.1
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 86.1
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 86.1
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 3.1e-91 338.6 187 86.1
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 3.1e-91 338.6 187 86.6
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 4.1e-91 338.2 187 85.6
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.1
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.1
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.1
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 5.3e-91 337.8 187 86.1
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.2e-90 336.7 187 84.5
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.5e-90 336.3 186 85.5
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.5e-90 336.3 186 85.5
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.5e-90 336.3 187 85.0
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.5e-90 336.3 187 85.6
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 1.5e-90 336.3 187 85.6
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.5e-90 336.3 187 85.0
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 2.0e-90 335.9 187 84.5
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 2.0e-90 335.9 187 85.0
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 85.6
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 84.5
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 85.6
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.6e-90 335.5 187 84.5
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 3.4e-90 335.1 186 86.0
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 5.8e-90 334.3 196 83.2
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 7.6e-90 334.0 186 86.0
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 1.0e-89 333.6 182 85.7
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 1.7e-89 332.8 187 84.5
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 2.2e-89 332.4 187 83.4
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 8.4e-89 330.5 182 85.2
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.1e-88 330.1 181 86.7
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.1e-88 330.1 187 83.4
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 1.9e-88 329.3 206 78.6
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 2.5e-88 328.9 187 84.0
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 4.2e-88 328.2 186 84.9
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 5.5e-88 327.8 187 82.9
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 7.1e-88 327.4 201 80.1
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.6e-87 326.2 187 81.8
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 1.6e-87 326.2 187 83.4
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 1.6e-87 326.2 206 77.7
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 3.5e-87 325.1 203 78.8
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 4.6e-87 324.7 182 84.1
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 7.9e-87 323.9 187 81.3
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.9e-86 321.6 181 83.4
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 3.9e-86 321.6 187 82.4
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 8.7e-86 320.5 208 75.5
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 2.5e-85 318.9 241 68.5
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 4.3e-85 318.2 187 81.8
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 2.2e-84 315.8 211 75.4
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 1.1e-83 313.5 184 79.3
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 4.1e-83 311.6 183 80.9
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 2.0e-82 309.3 181 79.6
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-80 303.1 181 77.9
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-80 303.1 181 77.9
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.9e-80 302.8 168 83.3
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 9.4e-80 300.4 167 85.0
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.7e-79 298.9 181 76.8
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 1.0e-78 297.0 181 75.7
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 4.3e-77 291.6 172 79.1
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 4.3e-77 291.6 181 75.1
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 2.4e-75 285.8 187 77.0
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 6.9e-75 284.3 186 77.4
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 4.5e-74 281.6 154 86.4
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.9e-73 278.9 187 73.3
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.9e-73 278.9 180 71.7
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 2.5e-72 275.8 159 83.0
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.2e-72 274.2 187 72.7
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 2.3e-70 269.2 149 85.9
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 3.0e-70 268.9 187 71.7
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 4.4e-69 265.0 148 84.5
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 3.7e-68 261.9 187 71.1
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 2.4e-67 259.2 214 60.7
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 4.2e-64 248.4 158 75.3
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 7.5e-61 237.7 187 66.3
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 1.7e-60 236.5 172 64.0
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.7e-57 226.5 187 62.0
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.9e-56 223.0 124 84.7
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 3.7e-52 208.8 127 75.6
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 4.5e-50 201.8 103 90.3
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 3.8e-49 198.7 167 54.5
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 8.5e-49 197.6 165 57.0
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 6.1e-47 191.4 98 87.8
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 8.0e-47 191.0 139 69.1
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.4e-46 190.3 106 86.8
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 3.4e-45 185.7 181 56.4
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 4.1e-43 178.7 103 78.6
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 7.0e-43 177.9 98 81.6
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 2.4e-35 152.9 85 88.2
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 3.7e-28 129.0 142 52.1
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.6e-21 106.3 68 70.6
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.3e-17 93.2 52 88.5
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.1e-16 90.9 52 88.5
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 1.2e-15 87.4 49 87.8
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 2.6e-13 79.7 41 87.8
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 7.6e-13 78.2 41 87.8
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 7.6e-13 78.2 45 84.4
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.9e-12 76.3 92 47.8
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 8.4e-12 74.7 39 84.6
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 4.1e-11 72.4 47 74.5
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.2e-10 70.9 68 51.5


User provided reference genes

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