Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 8.1e-79 297.0 146 100.0
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 2.0e-37 159.5 150 55.3
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.7e-26 122.5 151 47.0
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.1e-26 121.3 152 45.4
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.7e-20 103.2 147 44.2
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 8.5e-20 100.9 153 42.5
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 1.8e-17 93.2 142 38.0
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 2.3e-17 92.8 150 42.0
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 3.3e-16 89.0 160 37.5
PGR083G0669 Punica granatum HOM05D006536 ORTHO05D005877 7.4e-16 87.8 162 37.7
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 3.7e-15 85.5 141 35.5
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 3.7e-15 85.5 151 38.4
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 6.3e-15 84.7 141 34.8
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 3.1e-14 82.4 152 36.2
Manes.03G123318 Manihot esculenta HOM05D006536 ORTHO05D005877 7.0e-14 81.3 140 35.7
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 7.0e-14 81.3 149 34.2
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 7.0e-14 81.3 140 33.6
COL.COLO4_15402 Corchorus olitorius HOM05D006536 ORTHO05D005877 3.5e-13 79.0 142 35.2
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 4.5e-13 78.6 143 32.9
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 5.9e-13 78.2 139 37.4
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.3e-12 77.0 146 35.6
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 1.3e-12 77.0 146 30.8
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 1.3e-12 77.0 134 29.9
Manes.03G123600 Manihot esculenta HOM05D006536 ORTHO05D005877 2.2e-12 76.3 144 38.2
Potri.011G134400 Populus trichocarpa HOM05D006536 ORTHO05D005877 2.2e-12 76.3 151 31.1
Potri.011G134500 Populus trichocarpa HOM05D006536 ORTHO05D005877 2.2e-12 76.3 151 31.1
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 5.0e-12 75.1 149 32.2
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 5.0e-12 75.1 142 29.6
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 6.5e-12 74.7 139 36.0
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 8.5e-12 74.3 142 37.3
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 8.5e-12 74.3 146 28.8
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 1.5e-11 73.6 145 35.2
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.5e-11 73.6 126 42.1
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 1.5e-11 73.6 139 36.0
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 2.5e-11 72.8 154 33.8
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 4.2e-11 72.0 150 33.3
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 4.2e-11 72.0 157 32.5
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 5.5e-11 71.6 144 31.9
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 9.4e-11 70.9 141 31.2
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 9.4e-11 70.9 152 31.6
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 1.2e-10 70.5 147 31.3
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.6e-10 70.1 145 33.1
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 1.6e-10 70.1 116 34.5
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.1e-10 69.7 148 33.1
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 3.6e-10 68.9 147 33.3
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.1e-10 68.2 143 35.7
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 6.1e-10 68.2 142 33.8
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 1.0e-09 67.4 150 32.0
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.0e-09 67.4 146 34.2
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 1.0e-09 67.4 133 27.8
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 1.4e-09 67.0 113 38.1
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 1.4e-09 67.0 152 31.6
Migut.M01805 Erythranthe guttata HOM05D036104 ORTHO05D035166 1.8e-09 66.6 157 30.6
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 1.8e-09 66.6 94 37.2
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 3.0e-09 65.9 153 34.0
PGR083G0622 Punica granatum HOM05D006536 ORTHO05D005877 3.0e-09 65.9 71 42.3
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.0e-09 65.9 159 30.8
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.0e-09 65.5 163 31.9
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 5.2e-09 65.1 148 29.1
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 8.8e-09 64.3 141 27.7
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 8.8e-09 64.3 98 35.7
TWI39G0888 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 8.8e-09 64.3 150 30.0
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.2e-08 63.9 115 33.9
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.2e-08 63.9 118 37.3
SHI26699 Sapria himalayana HOM05D006536 ORTHO05D005877 1.5e-08 63.5 138 33.3
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 1.5e-08 63.5 153 32.7
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.0e-08 63.2 161 29.8
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 2.6e-08 62.8 59 44.1
Potri.011G134600 Populus trichocarpa HOM05D006536 ORTHO05D005877 2.6e-08 62.8 144 36.8
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 3.3e-08 62.4 136 28.7
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 4.4e-08 62.0 150 32.0
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 4.4e-08 62.0 92 33.7
Migut.M01806 Erythranthe guttata HOM05D036104 ORTHO05D035166 5.7e-08 61.6 125 32.8
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 5.7e-08 61.6 100 32.0
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 7.5e-08 61.2 93 31.2
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 9.7e-08 60.8 92 33.7
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 9.7e-08 60.8 149 27.5
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 9.7e-08 60.8 160 30.6
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.3e-07 60.5 145 27.6
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 1.3e-07 60.5 154 33.1
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 1.3e-07 60.5 145 26.9
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 1.7e-07 60.1 150 28.7
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.2e-07 59.7 149 29.5
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 2.2e-07 59.7 156 28.2
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 2.8e-07 59.3 144 30.6
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.7e-07 58.9 111 30.6
SGA_v2.0_scaffold75G24748 Striga asiatica HOM05D006536 ORTHO05D005877 4.8e-07 58.5 115 34.8
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 6.3e-07 58.2 128 29.7
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 8.2e-07 57.8 147 27.2
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 8.2e-07 57.8 119 33.6
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 1.1e-06 57.4 105 30.5
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.4e-06 57.0 158 32.9
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 1.4e-06 57.0 174 33.3
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-06 57.0 161 28.0
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-06 57.0 161 28.0
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-06 57.0 161 28.0
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.8e-06 56.6 145 26.9
PGR083G2006 Punica granatum HOM05D006536 ORTHO05D005877 1.8e-06 56.6 146 28.8
SHI27896 Sapria himalayana HOM05D006536 ORTHO05D005877 1.8e-06 56.6 116 35.3
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 1.8e-06 56.6 101 33.7
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.4e-06 56.2 145 29.7
Duzib248G1413 Durio zibethinus HOM05D020248 ORTHO05D022235 3.1e-06 55.8 130 28.5
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.1e-06 55.8 150 28.0
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.1e-06 55.8 105 35.2
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.1e-06 55.8 145 31.0
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.1e-06 55.8 113 31.9
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 5.3e-06 55.1 80 33.8
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 7.0e-06 54.7 125 28.8
Gohir.A12G155350 Gossypium hirsutum HOM05D020248 ORTHO05D022235 7.0e-06 54.7 92 32.6
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 7.0e-06 54.7 149 24.8
MBI18_g46234_MAGBIO Magnolia biondii HOM05D009374 ORTHO05D005877 9.1e-06 54.3 108 29.6


User provided reference genes

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