Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 2.4e-196 688.7 361 100.0
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.6e-160 568.5 361 80.9
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 8.8e-159 563.9 359 82.2
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.4e-156 556.6 359 81.1
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 5.9e-155 551.2 362 80.1
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 1.7e-154 549.7 361 79.2
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.9e-153 546.2 361 80.1
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 1.1e-150 537.0 361 76.7
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.1e-150 537.0 331 82.2
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.5e-150 536.6 361 77.6
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 2.0e-150 536.2 332 82.5
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 3.3e-150 535.4 350 78.0
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 3.7e-149 531.9 363 76.9
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 1.1e-148 530.4 363 76.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 4.1e-148 528.5 342 78.7
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 7.0e-148 527.7 375 77.1
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.6e-147 526.6 342 79.5
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.6e-147 526.6 362 76.2
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 2.0e-147 526.2 362 75.7
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 2.0e-147 526.2 332 80.4
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 7.7e-147 524.2 361 78.1
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.3e-146 523.5 334 79.6
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.3e-146 523.5 333 79.9
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.3e-146 523.5 360 76.4
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 1.7e-146 523.1 333 79.3
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.7e-146 523.1 362 76.0
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.9e-146 522.3 361 75.6
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 5.0e-146 521.5 334 80.8
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 8.5e-146 520.8 355 76.3
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.9e-145 519.6 336 78.6
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 3.2e-145 518.8 361 75.1
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 7.2e-145 517.7 355 76.9
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.2e-144 516.9 333 78.4
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.1e-144 516.2 333 78.4
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.1e-144 516.2 377 71.6
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 2.1e-144 516.2 374 72.2
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 2.7e-144 515.8 356 76.7
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 3.6e-144 515.4 332 78.0
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 4.7e-144 515.0 338 79.3
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.7e-144 515.0 361 74.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 4.7e-144 515.0 333 79.3
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 8.0e-144 514.2 363 75.8
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.0e-143 513.8 344 77.0
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.2e-143 511.5 363 74.4
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 8.8e-143 510.8 363 73.8
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.1e-142 510.4 333 78.4
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 3.3e-142 508.8 349 76.5
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 4.4e-142 508.4 359 73.8
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 9.7e-142 507.3 355 75.2
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 1.3e-141 506.9 343 74.1
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 2.2e-141 506.1 334 78.7
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 4.8e-141 505.0 362 73.2
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 4.8e-141 505.0 333 78.4
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 6.3e-141 504.6 339 75.5
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 8.2e-141 504.2 348 76.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.1e-140 503.8 361 73.4
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.8e-140 503.1 341 74.8
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.1e-140 501.9 339 74.9
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 7.0e-140 501.1 333 77.8
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 9.1e-140 500.7 345 74.5
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.6e-139 500.0 364 73.6
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.6e-139 500.0 345 74.2
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 3.5e-139 498.8 336 78.0
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 3.5e-139 498.8 362 74.3
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 4.5e-139 498.4 344 73.3
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 7.7e-139 497.7 334 78.1
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 2.2e-138 496.1 333 77.2
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 3.8e-138 495.4 343 74.3
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 8.5e-138 494.2 359 72.1
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 8.5e-138 494.2 363 73.6
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.5e-137 493.4 343 74.1
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.5e-137 493.4 343 74.1
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 1.5e-137 493.4 343 74.1
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 5.5e-137 491.5 363 72.5
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 2.7e-136 489.2 349 74.8
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 4.7e-136 488.4 342 74.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.7e-136 488.4 343 72.3
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 6.1e-136 488.0 343 73.5
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 3.0e-135 485.7 347 73.2
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 5.2e-135 485.0 361 71.2
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.0e-134 483.0 344 72.7
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 3.5e-131 472.2 333 74.5
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 2.2e-130 469.5 342 70.5
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 2.9e-130 469.2 363 71.6
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 5.0e-130 468.4 357 70.0
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 3.6e-128 462.2 337 70.9
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 2.8e-125 452.6 298 78.5
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 4.5e-123 445.3 269 83.6
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 1.5e-121 440.3 269 81.8
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 8.9e-111 404.4 330 61.8
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 2.0e-110 403.3 358 62.3
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 3.4e-110 402.5 354 59.9
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 5.0e-106 388.7 266 73.7
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 2.4e-100 369.8 335 59.7
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.7e-99 366.3 289 68.9
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 2.9e-93 346.3 271 69.4
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 6.2e-80 302.0 265 61.5
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.3e-74 284.3 335 48.1
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 1.5e-73 280.8 329 48.6
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.9e-73 280.4 271 59.0
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 4.8e-72 275.8 228 68.9
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 8.7e-66 255.0 287 50.5
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.5e-65 253.4 155 83.9
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.1e-64 248.4 190 68.4
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 1.2e-62 244.6 361 45.4
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.5e-62 244.2 192 65.1
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.2e-61 240.4 364 42.3
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.7e-57 225.7 186 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 3.3e-49 199.9 211 51.7
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.6e-48 197.6 140 70.7
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 3.2e-44 183.3 143 64.3
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.3e-41 173.3 114 75.4
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.2e-38 164.9 261 42.5
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.6e-38 163.7 91 90.1
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 9.4e-28 128.6 136 53.7
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 1.7e-24 117.9 66 87.9
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 5.3e-23 112.8 144 52.8
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.7e-21 107.8 57 93.0
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 5.5e-20 102.8 88 60.2
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 2.3e-13 80.9 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 8.6e-13 79.0 46 84.8
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 1.8e-07 61.2 50 60.0


User provided reference genes

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