Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00960 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.3e-65 251.5 124 100.0
Eucgr.F00904 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.4e-54 214.9 123 90.2
Eucgr.F00914 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.3e-53 213.0 123 86.2
Eucgr.L02721 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.8e-53 211.5 122 87.7
Eucgr.F00946 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.9e-52 209.1 122 87.7
Eucgr.F00956 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.8e-47 192.6 123 82.1
Eucgr.F00556 Eucalyptus grandis HOM05D000101 ORTHO05D000089 9.1e-39 163.7 123 72.4
Eucgr.F00542 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.2e-38 163.3 124 70.2
Eucgr.F00959 Eucalyptus grandis HOM05D000101 ORTHO05D000089 2.6e-38 162.2 123 70.7
Eucgr.F00546 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.3e-37 159.8 122 73.0
Eucgr.B00463 Eucalyptus grandis HOM05D000101 ORTHO05D000089 4.1e-31 138.3 123 64.2
Eucgr.L01861 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.5e-30 135.2 123 63.4
Eucgr.B00446 Eucalyptus grandis HOM05D000101 ORTHO05D000089 2.5e-28 129.0 117 61.5
Eucgr.B00443 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.2e-28 128.6 117 60.7
Eucgr.B00455 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.2e-27 126.7 113 61.1
Eucgr.L03650 Eucalyptus grandis HOM05D000101 ORTHO05D000089 4.7e-27 124.8 97 72.2
Eucgr.L02915 Eucalyptus grandis HOM05D000101 ORTHO05D000089 8.0e-27 124.0 102 64.7
Eucgr.F00954 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.3e-25 118.6 123 56.9
Eucgr.F01653 Eucalyptus grandis HOM05D000101 ORTHO05D000089 7.5e-25 117.5 100 64.0
Eucgr.F00896 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.7e-24 116.3 105 64.8
Eucgr.B00450 Eucalyptus grandis HOM05D000101 ORTHO05D000089 2.0e-22 109.4 92 64.1
Eucgr.B00465 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.0e-21 107.1 123 52.0
Eucgr.F00551 Eucalyptus grandis HOM05D000101 ORTHO05D000089 6.5e-21 104.4 102 54.9
Eucgr.F00886 Eucalyptus grandis HOM05D000101 ORTHO05D000089 2.7e-19 99.0 65 78.5
Eucgr.F00948 Eucalyptus grandis HOM05D000101 ORTHO05D000089 5.2e-18 94.7 66 75.8
Peaxi162Scf00264g00068 Petunia axillaris HOM05D000101 ORTHO05D000089 1.6e-11 73.2 109 42.2
Peaxi162Scf01226g00019 Petunia axillaris HOM05D000101 ORTHO05D000089 1.6e-11 73.2 109 42.2
Cc00_g02120 Coffea canephora HOM05D000101 ORTHO05D000089 3.6e-11 72.0 120 34.2
Cc05_g02210 Coffea canephora HOM05D000101 ORTHO05D000089 3.6e-11 72.0 107 36.4
Eucgr.G01856 Eucalyptus grandis HOM05D000101 ORTHO05D000089 8.0e-11 70.9 108 45.4
Potri.001G404800 Populus trichocarpa HOM05D000101 ORTHO05D000089 8.0e-11 70.9 130 37.7
Potri.011G124000 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.0e-10 68.9 130 36.9
Thecc.07G090800 Theobroma cacao HOM05D000101 ORTHO05D000089 3.0e-10 68.9 114 38.6
Cc00_g02040 Coffea canephora HOM05D000101 ORTHO05D000089 5.2e-10 68.2 103 38.8
QL02p080444 Quercus lobata HOM05D000101 ORTHO05D000089 5.2e-10 68.2 106 39.6
Peaxi162Scf00264g00625 Petunia axillaris HOM05D000101 ORTHO05D000089 6.8e-10 67.8 115 38.3
Dinv24608 Davidia involucrata HOM05D000101 ORTHO05D000089 8.8e-10 67.4 107 38.3
Eucgr.F01059 Eucalyptus grandis HOM05D000101 ORTHO05D000089 8.8e-10 67.4 106 43.4
Cc00_g09490 Coffea canephora HOM05D000101 ORTHO05D000089 1.2e-09 67.0 107 35.5
Thecc.07G091100 Theobroma cacao HOM05D000101 ORTHO05D000089 1.5e-09 66.6 114 37.7
Cc00_g21080 Coffea canephora HOM05D000101 ORTHO05D000089 2.0e-09 66.2 103 37.9
Potri.019G020102 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.6e-09 65.9 110 40.0
Oeu010939.1 Olea europaea HOM05D000101 ORTHO05D000089 3.4e-09 65.5 109 34.9
Peaxi162Scf00264g00067 Petunia axillaris HOM05D000101 ORTHO05D000089 3.4e-09 65.5 115 37.4
Peaxi162Scf00264g00520 Petunia axillaris HOM05D000101 ORTHO05D000089 3.4e-09 65.5 108 39.8
CAN.G1661.1 Capsicum annuum HOM05D000101 ORTHO05D000089 4.4e-09 65.1 126 35.7
Cc00_g02080 Coffea canephora HOM05D000101 ORTHO05D000089 4.4e-09 65.1 117 34.2
Potri.019G014372 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.4e-09 65.1 109 36.7
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 5.7e-09 64.7 107 37.4
Sopen10g028100 Solanum pennellii HOM05D000101 ORTHO05D000089 7.5e-09 64.3 127 37.0
Cc00_g02130 Coffea canephora HOM05D000101 ORTHO05D000089 9.8e-09 63.9 106 36.8
Cc00_g02030 Coffea canephora HOM05D000101 ORTHO05D000089 1.3e-08 63.5 107 34.6
Potri.019G014340 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.3e-08 63.5 109 37.6
Thecc.07G090400 Theobroma cacao HOM05D000101 ORTHO05D000089 1.3e-08 63.5 113 34.5
MBI05_g36586_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.7e-08 63.2 105 34.3
Oeu062625.3 Olea europaea HOM05D000101 ORTHO05D000089 1.7e-08 63.2 108 33.3
Potri.019G014338 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.2e-08 62.8 109 38.5
Thecc.07G061400 Theobroma cacao HOM05D000101 ORTHO05D000089 2.2e-08 62.8 111 39.6
Dinv29328 Davidia involucrata HOM05D000101 ORTHO05D000089 2.8e-08 62.4 103 37.9
Peaxi162Scf00595g00003 Petunia axillaris HOM05D000101 ORTHO05D000089 2.8e-08 62.4 114 39.5
Potri.019G020500 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.8e-08 62.4 109 36.7
Potri.T045375 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.8e-08 62.4 109 39.4
Cc05_g02460 Coffea canephora HOM05D000101 ORTHO05D000089 4.9e-08 61.6 109 36.7
Duzib213G0318 Durio zibethinus HOM05D000101 ORTHO05D000089 4.9e-08 61.6 112 33.9
Eucgr.F00916 Eucalyptus grandis HOM05D000101 ORTHO05D000089 4.9e-08 61.6 100 39.0
Oeu041297.1 Olea europaea HOM05D000101 ORTHO05D000089 4.9e-08 61.6 109 33.0
Potri.019G014348 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.9e-08 61.6 109 35.8
QL08p018471 Quercus lobata HOM05D000101 ORTHO05D000089 4.9e-08 61.6 108 34.3
Solyc10g076440.1 Solanum lycopersicum HOM05D000101 ORTHO05D000089 4.9e-08 61.6 127 36.2
Thecc.07G057800 Theobroma cacao HOM05D000101 ORTHO05D000089 4.9e-08 61.6 111 38.7
Duzib213G0007 Durio zibethinus HOM05D000101 ORTHO05D000089 6.3e-08 61.2 112 33.9
Nitab4.5_0005335g0050 Nicotiana tabacum HOM05D000101 ORTHO05D000089 6.3e-08 61.2 111 34.2
Cc01_g03010 Coffea canephora HOM05D000101 ORTHO05D000089 8.3e-08 60.8 115 34.8
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 8.3e-08 60.8 107 36.4
Eucgr.F00549 Eucalyptus grandis HOM05D000101 ORTHO05D000089 8.3e-08 60.8 137 34.3
Cc05_g02150 Coffea canephora HOM05D000101 ORTHO05D000089 1.1e-07 60.5 102 36.3
Potri.019G014352 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-07 60.5 109 36.7
Potri.T045000 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.1e-07 60.5 131 33.6
Dinv04573 Davidia involucrata HOM05D000101 ORTHO05D000089 1.4e-07 60.1 137 29.2
Eucgr.L01109 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.4e-07 60.1 136 32.4
MBI11_g05445_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.4e-07 60.1 105 36.2
Potri.019G014334 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.4e-07 60.1 109 36.7
Solyc02g037540.3 Solanum lycopersicum HOM05D000101 ORTHO05D000089 1.4e-07 60.1 114 34.2
Sopen02g011950 Solanum pennellii HOM05D000101 ORTHO05D000089 1.4e-07 60.1 114 34.2
Cc01_g03020 Coffea canephora HOM05D000101 ORTHO05D000089 1.8e-07 59.7 120 34.2
Duzib238G0002 Durio zibethinus HOM05D000101 ORTHO05D000089 1.8e-07 59.7 112 33.9
Eucgr.L03485 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.8e-07 59.7 102 37.3
Potri.011G127200 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.8e-07 59.7 127 34.6
Potri.T045200 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.8e-07 59.7 128 33.6
Thecc.06G071400 Theobroma cacao HOM05D000101 ORTHO05D000089 1.8e-07 59.7 97 34.0
Thecc.07G091000 Theobroma cacao HOM05D000101 ORTHO05D000089 1.8e-07 59.7 114 33.3
CAN.G639.26 Capsicum annuum HOM05D000101 ORTHO05D000089 2.4e-07 59.3 115 35.7
Ciclev10027118m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.4e-07 59.3 95 33.7
COL.COLO4_16254 Corchorus olitorius HOM05D000101 ORTHO05D000089 2.4e-07 59.3 111 37.8
Potri.018G137900 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.4e-07 59.3 109 35.8
Potri.018G145532 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.4e-07 59.3 109 36.7
Potri.019G014312 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.4e-07 59.3 109 34.9
Thecc.07G061100 Theobroma cacao HOM05D000101 ORTHO05D000089 2.4e-07 59.3 111 39.6
GSVIVG01014124001 Vitis vinifera HOM05D000101 ORTHO05D000089 2.4e-07 59.3 94 35.1
Cc00_g21070 Coffea canephora HOM05D000101 ORTHO05D000089 3.1e-07 58.9 106 34.0
Potri.019G014370 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.1e-07 58.9 109 36.7
Potri.T046001 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.1e-07 58.9 109 35.8
PGSC0003DMG400021469 Solanum tuberosum HOM05D000101 ORTHO05D000089 3.1e-07 58.9 114 33.3
ATR0680G166 Amborella trichopoda HOM05D000101 ORTHO05D000089 4.1e-07 58.5 106 38.7
Eucgr.I00078 Eucalyptus grandis HOM05D000101 ORTHO05D000089 4.1e-07 58.5 102 38.2
Potri.019G014320 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.1e-07 58.5 109 35.8
Potri.019G014324 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.1e-07 58.5 109 36.7
Eucgr.F00938 Eucalyptus grandis HOM05D000101 ORTHO05D000089 5.4e-07 58.2 135 31.9
Potri.019G014360 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.4e-07 58.2 112 34.8
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 5.4e-07 58.2 114 34.2
Thecc.07G078500 Theobroma cacao HOM05D000101 ORTHO05D000089 5.4e-07 58.2 110 36.4
Thecc.07G090600 Theobroma cacao HOM05D000101 ORTHO05D000089 5.4e-07 58.2 114 34.2
Actinidia05169 Actinidia chinensis HOM05D000101 ORTHO05D000089 7.0e-07 57.8 123 30.9
Duzib213G0218 Durio zibethinus HOM05D000101 ORTHO05D000089 7.0e-07 57.8 110 34.5
Duzib268G1774 Durio zibethinus HOM05D000101 ORTHO05D000089 7.0e-07 57.8 101 33.7
Eucgr.F00830 Eucalyptus grandis HOM05D000101 ORTHO05D000089 7.0e-07 57.8 102 37.3
Potri.018G145566 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.0e-07 57.8 109 37.6
QL08p018363 Quercus lobata HOM05D000101 ORTHO05D000089 7.0e-07 57.8 109 35.8
Thecc.07G060900 Theobroma cacao HOM05D000101 ORTHO05D000089 7.0e-07 57.8 111 38.7
CAN.G9233.1 Capsicum annuum HOM05D000101 ORTHO05D000089 9.2e-07 57.4 103 36.9
Dinv24616 Davidia involucrata HOM05D000101 ORTHO05D000089 9.2e-07 57.4 107 34.6
Migut.D01701 Erythranthe guttata HOM05D000101 ORTHO05D000089 9.2e-07 57.4 98 34.7
Potri.019G014328 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.2e-07 57.4 109 35.8
Potri.019G014346 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.2e-07 57.4 109 36.7
Potri.019G014364 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.2e-07 57.4 109 36.7
Ciclev10027452m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.2e-06 57.0 95 34.7
Eucgr.F00828 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.2e-06 57.0 107 38.3
Gohir.A11G285300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.2e-06 57.0 114 32.5
Potri.011G127300 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.2e-06 57.0 134 33.6
Thecc.07G057600 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-06 57.0 111 37.8
Thecc.07G061800 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-06 57.0 111 37.8
Thecc.07G090700 Theobroma cacao HOM05D000101 ORTHO05D000089 1.2e-06 57.0 114 35.1
Ciclev10024846m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.6e-06 56.6 101 33.7
Dinv00143 Davidia involucrata HOM05D000101 ORTHO05D000089 1.6e-06 56.6 112 33.0
Potri.019G014322 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.6e-06 56.6 109 37.6
QL09p032708 Quercus lobata HOM05D000101 ORTHO05D000089 1.6e-06 56.6 128 31.2
Thecc.07G060300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-06 56.6 111 37.8
Thecc.07G060700 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-06 56.6 111 36.9
Thecc.07G091200 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-06 56.6 109 34.9
Aqoxy4G01205 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 2.0e-06 56.2 102 35.3
Duzib114G0705 Durio zibethinus HOM05D000101 ORTHO05D000089 2.0e-06 56.2 111 34.2
Duzib192G0872 Durio zibethinus HOM05D000101 ORTHO05D000089 2.0e-06 56.2 101 32.7
Thhalv10023256m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 2.0e-06 56.2 95 31.6
Manes.10G030001 Manihot esculenta HOM05D000101 ORTHO05D000089 2.0e-06 56.2 105 38.1
Potri.019G011826 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-06 56.2 128 33.6
Potri.019G013140 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-06 56.2 109 34.9
Potri.019G014336 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.0e-06 56.2 109 35.8
Thecc.07G058100 Theobroma cacao HOM05D000101 ORTHO05D000089 2.0e-06 56.2 111 37.8
Carub.0001s1196 Capsella rubella HOM05D000101 ORTHO05D000089 2.7e-06 55.8 114 35.1
Ciclev10027464m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.7e-06 55.8 95 31.6
Gohir.A01G046050 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.7e-06 55.8 109 34.9
Gorai.010G225800 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.7e-06 55.8 106 33.0
MBI11_g05442_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.7e-06 55.8 105 37.1
Peaxi162Scf01226g00004 Petunia axillaris HOM05D000101 ORTHO05D000089 2.7e-06 55.8 117 33.3
Potri.018G145562 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.7e-06 55.8 109 35.8
Potri.T044800 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.7e-06 55.8 109 35.8
Thecc.07G078600 Theobroma cacao HOM05D000101 ORTHO05D000089 2.7e-06 55.8 110 37.3
Duzib213G0389 Durio zibethinus HOM05D000101 ORTHO05D000089 3.5e-06 55.5 109 35.8
Eucgr.F01052 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.5e-06 55.5 49 53.1
Gohir.D11G294500 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.5e-06 55.5 111 37.8
Gorai.007G317700 Gossypium raimondii HOM05D000101 ORTHO05D000089 3.5e-06 55.5 111 37.8
MBI04_g25417_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.5e-06 55.5 114 30.7
QL05p057340 Quercus lobata HOM05D000101 ORTHO05D000089 3.5e-06 55.5 102 34.3
Aa31LG2G10080 Aethionema arabicum HOM05D000101 ORTHO05D000089 4.5e-06 55.1 114 30.7
CAN.G1661.7 Capsicum annuum HOM05D000101 ORTHO05D000089 4.5e-06 55.1 103 35.0
Duzib268G1134 Durio zibethinus HOM05D000101 ORTHO05D000089 4.5e-06 55.1 112 33.0
MBI05_g44824_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.5e-06 55.1 105 31.4
MBI11_g05451_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.5e-06 55.1 105 33.3
Potri.018G145578 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.5e-06 55.1 109 37.6
Potri.019G011169 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.5e-06 55.1 103 35.0
Potri.019G014356 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.5e-06 55.1 109 34.9
Thecc.07G062000 Theobroma cacao HOM05D000101 ORTHO05D000089 4.5e-06 55.1 111 37.8
Actinidia39412 Actinidia chinensis HOM05D000101 ORTHO05D000089 5.9e-06 54.7 90 35.6
CAN.G261.9 Capsicum annuum HOM05D000101 ORTHO05D000089 5.9e-06 54.7 97 36.1
Duzib213G0220 Durio zibethinus HOM05D000101 ORTHO05D000089 5.9e-06 54.7 111 33.3
Thecc.07G060200 Theobroma cacao HOM05D000101 ORTHO05D000089 5.9e-06 54.7 111 36.9
ATR0322G022 Amborella trichopoda HOM05D000101 ORTHO05D000089 7.7e-06 54.3 107 31.8
Duzib213G1018 Durio zibethinus HOM05D000101 ORTHO05D000089 7.7e-06 54.3 107 38.3
Gohir.A01G018420 Gossypium hirsutum HOM05D000101 ORTHO05D000089 7.7e-06 54.3 95 29.5
Potri.018G136301 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.7e-06 54.3 91 36.3
GSVIVG01038446001 Vitis vinifera HOM05D000101 ORTHO05D000089 7.7e-06 54.3 103 35.0


User provided reference genes

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