Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 2.7e-200 701.8 356 100.0
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 5.5e-129 464.9 356 67.7
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.2e-122 443.0 349 65.9
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 4.2e-121 438.7 350 65.4
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 4.2e-121 438.7 356 65.4
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 4.2e-121 438.7 354 65.5
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 6.1e-120 434.9 356 63.5
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 7.9e-120 434.5 354 64.1
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 5.1e-119 431.8 354 63.3
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 5.1e-119 431.8 354 63.8
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 8.7e-119 431.0 357 65.0
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 1.5e-118 430.3 356 63.2
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.9e-118 429.9 354 63.8
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 3.3e-118 429.1 359 63.5
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 3.3e-118 429.1 351 65.2
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 1.6e-117 426.8 353 64.0
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 4.8e-117 425.2 353 62.3
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 8.2e-117 424.5 358 64.2
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 1.1e-116 424.1 355 62.5
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 2.0e-115 419.9 356 62.9
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 2.6e-115 419.5 345 61.4
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 3.4e-115 419.1 357 61.3
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 7.7e-115 417.9 355 61.7
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 1.0e-114 417.5 354 62.1
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 2.9e-114 416.0 298 68.8
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 5.0e-114 415.2 346 61.0
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 6.5e-114 414.8 340 62.4
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.4e-113 413.7 355 60.6
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 1.9e-113 413.3 350 62.9
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 7.2e-113 411.4 342 63.2
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 7.2e-113 411.4 304 65.8
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 9.4e-113 411.0 335 63.9
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.2e-112 410.6 355 60.8
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.6e-112 410.2 308 67.2
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 2.7e-112 409.5 356 60.4
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 3.6e-112 409.1 354 59.6
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 3.6e-112 409.1 356 61.0
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 1.4e-111 407.1 365 58.4
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 6.7e-111 404.8 346 62.7
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 2.0e-110 403.3 347 62.0
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 2.5e-110 402.9 309 64.1
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 2.5e-110 402.9 355 59.2
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 4.3e-110 402.1 354 56.2
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 4.3e-110 402.1 337 61.7
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 1.8e-108 396.7 353 59.8
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.4e-108 396.4 316 62.7
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 9.1e-108 394.4 354 58.8
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 1.5e-107 393.7 354 59.0
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 1.5e-107 393.7 354 59.0
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 1.5e-107 393.7 354 59.0
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 1.5e-107 393.7 354 59.0
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.5e-107 393.7 301 65.1
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 2.6e-107 392.9 354 58.8
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 3.4e-107 392.5 352 59.7
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 4.5e-107 392.1 355 59.2
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.3e-106 390.6 350 57.7
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 3.8e-106 389.0 316 61.4
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 5.0e-106 388.7 303 63.7
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 8.5e-106 387.9 354 57.1
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 3.2e-105 386.0 305 63.6
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 9.4e-105 384.4 361 58.4
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.2e-104 384.0 303 63.4
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 6.1e-104 381.7 339 59.0
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 1.0e-103 380.9 356 56.5
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.6e-102 376.3 309 61.5
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 4.4e-102 375.6 304 61.5
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 4.4e-102 375.6 319 60.8
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 7.4e-102 374.8 312 62.2
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 9.7e-102 374.4 321 59.8
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 9.7e-102 374.4 357 54.9
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.7e-101 373.6 336 57.4
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 2.2e-101 373.2 308 62.3
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 4.8e-101 372.1 349 57.3
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 6.3e-101 371.7 336 58.6
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 8.2e-101 371.3 361 54.8
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.1e-100 369.4 354 56.8
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 5.3e-100 368.6 354 56.2
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 2.0e-99 366.7 304 60.5
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 4.5e-99 365.5 316 59.8
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 4.5e-99 365.5 319 60.2
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.0e-98 364.4 371 53.1
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 5.5e-97 358.6 408 50.2
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.2e-96 357.5 314 57.6
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.0e-95 354.4 307 57.3
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 2.0e-91 340.1 348 54.0
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 1.0e-90 337.8 359 52.4
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 3.8e-90 335.9 270 62.6
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 2.5e-89 333.2 300 57.7
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 1.2e-88 330.9 270 61.9
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 3.0e-87 326.2 272 60.3
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 4.2e-81 305.8 276 53.6
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 8.8e-79 298.1 365 46.6
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 7.5e-78 295.0 352 46.6
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 1.7e-77 293.9 324 50.6
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 8.3e-77 291.6 271 54.2
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.4e-76 290.0 403 45.4
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 3.3e-73 279.6 304 50.7
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 9.5e-65 251.5 266 51.5
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 3.9e-58 229.6 357 38.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 3.6e-56 223.0 260 47.3
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 3.2e-52 209.9 185 56.2
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 6.0e-51 205.7 217 55.3
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 3.6e-48 196.4 133 68.4
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.1e-44 184.9 132 65.2
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.1e-44 184.9 132 65.2
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.4e-44 184.5 132 65.9
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 4.7e-40 169.5 187 48.7
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 9.9e-38 161.8 192 51.6
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 2.4e-36 157.1 169 50.9
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 4.6e-35 152.9 122 60.7
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 4.2e-28 129.8 90 68.9
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 7.9e-27 125.6 94 64.9
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 1.6e-24 117.9 259 31.7
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 8.1e-24 115.5 251 34.3
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 3.1e-15 87.0 120 42.5
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 7.9e-11 72.4 61 57.4
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.5e-09 67.4 56 57.1
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 2.4e-07 60.8 132 30.3


User provided reference genes

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