Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 6.2e-104 380.9 214 100.0
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 1.0e-53 214.2 221 60.2
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.4e-49 198.7 215 55.3
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.7e-48 196.8 217 54.4
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 4.9e-48 195.3 217 59.4
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 5.4e-47 191.8 215 55.3
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 7.0e-47 191.4 224 56.2
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.2e-46 190.7 216 56.0
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 3.5e-46 189.1 221 57.9
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.0e-45 187.6 215 58.1
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 2.9e-45 186.0 220 57.7
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 8.6e-45 184.5 219 57.1
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.1e-44 184.1 215 54.0
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.9e-44 183.3 216 50.5
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 4.3e-44 182.2 219 58.4
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 9.5e-44 181.0 218 52.8
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 6.1e-43 178.3 216 51.9
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.0e-42 177.6 223 50.7
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.2e-42 175.3 224 48.2
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 6.8e-42 174.9 224 47.8
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 8.9e-42 174.5 216 51.4
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.2e-41 174.1 224 47.8
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 1.2e-41 174.1 217 51.2
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 4.4e-41 172.2 214 52.3
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.4e-41 172.2 224 49.6
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.4e-41 172.2 224 49.6
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.3e-40 170.6 220 50.9
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.2e-40 169.9 202 52.5
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 6.4e-40 168.3 219 48.9
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 8.3e-40 167.9 219 51.6
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.1e-39 165.6 214 47.7
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 5.9e-38 161.8 228 47.4
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.7e-37 160.2 216 48.6
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.7e-37 160.2 220 51.4
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 5.0e-37 158.7 217 48.4
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 5.6e-36 155.2 219 46.6
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.2e-35 154.1 221 46.2
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 1.6e-35 153.7 212 48.1
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.4e-34 150.6 208 48.1
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.4e-34 150.6 212 46.2
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.8e-34 150.2 214 46.7
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.3e-34 149.8 209 47.8
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 8.9e-34 147.9 215 46.5
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 2.6e-33 146.4 215 44.2
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 2.6e-33 146.4 216 46.8
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.4e-33 145.6 205 50.2
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 7.5e-33 144.8 214 44.9
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.7e-32 143.7 196 52.0
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 1.1e-31 141.0 208 45.7
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.4e-31 140.6 219 45.7
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 2.4e-31 139.8 211 44.1
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 3.2e-31 139.4 214 43.9
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 1.2e-30 137.5 203 46.3
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.2e-30 137.5 234 44.9
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.6e-30 137.1 207 45.4
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 2.7e-30 136.3 206 46.1
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 4.6e-30 135.6 218 43.1
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 8.6e-29 131.3 215 42.8
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 8.6e-29 131.3 203 44.8
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.5e-28 130.6 223 44.4
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.5e-28 129.8 205 42.4
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 9.5e-28 127.9 203 42.9
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.2e-27 127.5 202 42.1
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.6e-27 127.1 243 43.6
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 2.1e-27 126.7 245 41.2
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.6e-27 125.9 220 42.3
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 4.7e-27 125.6 202 43.6
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.8e-26 123.6 203 42.9
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 8.9e-26 121.3 199 43.7
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 4.4e-25 119.0 226 42.0
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.3e-24 117.5 205 41.5
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.7e-24 117.1 213 43.7
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 3.2e-23 112.8 210 40.5
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 4.1e-23 112.5 203 42.4
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 4.1e-23 112.5 197 42.1
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.2e-22 110.9 201 42.8
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 1.2e-22 110.9 199 40.2
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.2e-22 110.9 153 46.4
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.6e-22 110.5 188 43.6
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 2.7e-22 109.8 201 42.3
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.7e-22 109.8 83 65.1
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 3.5e-22 109.4 202 40.6
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.3e-21 107.5 185 40.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 3.0e-21 106.3 216 40.3
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 3.9e-21 105.9 156 51.3
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 5.6e-20 102.1 202 39.1
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.6e-19 100.5 157 43.9
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 3.6e-19 99.4 212 39.6
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 5.2e-18 95.5 214 39.7
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 8.9e-18 94.7 168 37.5
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 3.8e-16 89.4 109 49.5
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 4.9e-16 89.0 204 35.8
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 6.4e-16 88.6 163 36.2
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 7.6e-09 65.1 107 38.3
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.7e-08 63.9 188 33.0
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 6.4e-08 62.0 64 48.4
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 8.4e-08 61.6 67 44.8
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 7.1e-07 58.5 229 32.3


User provided reference genes

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