Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 1.1e-141 506.9 316 100.0
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.3e-17 94.7 192 39.6
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 2.5e-16 90.5 172 36.6
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 2.1e-15 87.4 315 33.7
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.0e-14 85.1 173 42.2
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 4.0e-14 83.2 172 43.6
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 1.2e-13 81.6 172 37.8
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 2.0e-13 80.9 192 34.9
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 5.7e-13 79.3 332 29.8
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 7.5e-13 79.0 174 36.2
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 2.2e-12 77.4 329 28.6
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 6.3e-12 75.9 174 36.2
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.1e-11 75.1 79 55.7
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 2.4e-11 73.9 316 29.1
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 2.4e-11 73.9 172 33.1
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 2.4e-11 73.9 334 28.7
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 3.1e-11 73.6 321 29.0
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 4.1e-11 73.2 182 35.2
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 7.0e-11 72.4 187 36.9
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 9.1e-11 72.0 182 33.0
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 2.7e-10 70.5 175 37.1
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.7e-10 70.5 171 32.2
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.0e-09 68.6 182 33.5
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 1.7e-09 67.8 174 43.7
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.7e-09 67.8 174 35.1
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 2.9e-09 67.0 87 52.9
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 3.8e-09 66.6 174 43.7
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 5.0e-09 66.2 185 32.4
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 6.6e-09 65.9 205 31.7
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 6.6e-09 65.9 178 33.7
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 6.6e-09 65.9 313 28.8
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 6.6e-09 65.9 171 31.6
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 8.6e-09 65.5 90 44.4
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 8.6e-09 65.5 308 28.2
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 1.1e-08 65.1 173 34.1
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.1e-08 65.1 343 30.6
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 1.1e-08 65.1 93 47.3
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 2.5e-08 63.9 180 33.9
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 2.5e-08 63.9 235 32.8
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.3e-08 63.5 296 27.7
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 3.3e-08 63.5 302 27.8
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 5.6e-08 62.8 178 33.1
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 5.6e-08 62.8 304 24.7
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 5.6e-08 62.8 89 47.2
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 5.6e-08 62.8 90 50.0
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 9.5e-08 62.0 301 27.2
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.2e-07 61.6 171 31.6
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.2e-07 61.6 171 31.6
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 1.2e-07 61.6 191 37.7
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 1.6e-07 61.2 91 46.2
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.6e-07 61.2 89 47.2
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.1e-07 60.8 178 32.6
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 2.8e-07 60.5 90 43.3
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 3.6e-07 60.1 155 33.5
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 3.6e-07 60.1 178 29.2
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.7e-07 59.7 300 24.0
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 4.7e-07 59.7 176 35.2
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.8e-06 57.8 312 28.5
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.3e-06 57.4 302 26.8
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 2.3e-06 57.4 323 26.3
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 2.3e-06 57.4 84 42.9
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 3.0e-06 57.0 314 35.7
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 4.0e-06 56.6 187 34.8
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 4.0e-06 56.6 317 28.4
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 6.8e-06 55.8 169 31.4
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 8.9e-06 55.5 183 29.5


User provided reference genes

Program Settings