Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00547 Eucalyptus grandis HOM05D028058 ORTHO05D029319 6.9e-120 434.1 238 100.0
Eucgr.L01859 Eucalyptus grandis HOM05D028058 ORTHO05D029319 2.8e-68 262.7 247 63.6
Eucgr.F00906 Eucalyptus grandis HOM05D028058 ORTHO05D029319 9.5e-61 237.7 171 67.3
Eucgr.F00886 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.2e-18 97.8 95 50.5
MSTRG.27051 Avicennia marina HOM05D000023 ORTHO05D000014 9.3e-08 61.6 74 33.8
SGA_v2.0_scaffold192G40592 Striga asiatica HOM05D000023 ORTHO05D000014 1.2e-07 61.2 73 37.0
Psat5g080600 Pisum sativum HOM05D000023 ORTHO05D000014 2.1e-07 60.5 75 32.0
TPR.G26303 Trifolium pratense HOM05D000023 ORTHO05D000014 2.1e-07 60.5 75 32.0
arahy.Tifrunner.gnm1.ann1.J9UGKB Arachis hypogaea HOM05D000023 ORTHO05D000014 3.5e-07 59.7 59 35.6
arahy.Tifrunner.gnm1.ann1.L964KV Arachis hypogaea HOM05D000023 ORTHO05D000014 3.5e-07 59.7 59 35.6
Lj1g0002954 Lotus japonicus HOM05D000023 ORTHO05D000014 3.5e-07 59.7 59 35.6
Rhsim03G0197500 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.5e-07 59.7 75 32.0
HanXRQChr05g0144091 Helianthus annuus HOM05D000023 ORTHO05D000014 4.6e-07 59.3 74 33.8
vmacro06584 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 4.6e-07 59.3 74 32.4
PSO135G0262 Papaver somniferum HOM05D000023 ORTHO05D000014 7.9e-07 58.5 74 32.4
PSO384G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 7.9e-07 58.5 74 32.4
QL09p011205 Quercus lobata HOM05D000023 ORTHO05D000014 7.9e-07 58.5 57 38.6
TWI14G1170 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.9e-07 58.5 74 32.4
HPP92_002831 Vanilla planifolia HOM05D000023 ORTHO05D000014 7.9e-07 58.5 57 40.4
AT1G79740 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 1.0e-06 58.2 59 37.3
CSS0036184 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.0e-06 58.2 59 35.6
CARHR074680 Cardamine hirsuta HOM05D000023 ORTHO05D000014 1.0e-06 58.2 59 37.3
CDE04G3760 Ceratophyllum demersum HOM05D000023 ORTHO05D000014 1.0e-06 58.2 59 39.0
Hund04822 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-06 57.8 57 38.6
Atru.chr1.286 Acer truncatum HOM05D000023 ORTHO05D000014 1.8e-06 57.4 75 32.0
EL10Ac3g05358 Beta vulgaris HOM05D000023 ORTHO05D000014 1.8e-06 57.4 57 36.8
CANSAT21G0690 Cannabis sativa HOM05D000023 ORTHO05D000014 1.8e-06 57.4 59 35.6
CsaV3_5G000770 Cucumis sativus L. HOM05D000023 ORTHO05D000014 1.8e-06 57.4 74 33.8
FvH4_7g30891 Fragaria vesca HOM05D000023 ORTHO05D000014 1.8e-06 57.4 59 35.6
Solyc03g007510.4 Solanum lycopersicum HOM05D000023 ORTHO05D000014 1.8e-06 57.4 59 37.3
GSVIVG01028726001 Vitis vinifera HOM05D000023 ORTHO05D000014 1.8e-06 57.4 74 31.1
Aqoxy7G00206 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 2.3e-06 57.0 59 35.6
Duzib205G1169 Durio zibethinus HOM05D000023 ORTHO05D000014 2.3e-06 57.0 74 31.1
Eucgr.E02624 Eucalyptus grandis HOM05D000023 ORTHO05D013832 2.3e-06 57.0 109 33.0
PGR042G0249 Punica granatum HOM05D000023 ORTHO05D000014 2.3e-06 57.0 59 35.6
RcHm_v2.0_Chr6g0294991 Rosa chinensis HOM05D000023 ORTHO05D000014 2.3e-06 57.0 70 37.1
THA.LOC104814753 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 2.3e-06 57.0 77 32.5
CSS0012239 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.0e-06 56.6 57 35.1
ClCG01G000670 Citrullus lanatus HOM05D000023 ORTHO05D000014 3.0e-06 56.6 77 32.5
MBI07_g11399_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 3.0e-06 56.6 85 29.4
Nn1g01787 Nelumbo nucifera HOM05D000023 ORTHO05D000014 3.0e-06 56.6 57 36.8
Eucgr.E02343 Eucalyptus grandis HOM05D000306 ORTHO05D013319 3.9e-06 56.2 105 33.3
MELO3C005863.2 Cucumis melo HOM05D000023 ORTHO05D000014 5.1e-06 55.8 72 33.3
Nitab4.5_0000472g0210 Nicotiana tabacum HOM05D000023 ORTHO05D000014 5.1e-06 55.8 72 31.9
Peaxi162Scf00904g00461 Petunia axillaris HOM05D000023 ORTHO05D000014 5.1e-06 55.8 72 33.3
Cpa.g.sc3.39 Carica papaya HOM05D000023 ORTHO05D000014 6.7e-06 55.5 57 35.1
AUR62031480 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.7e-06 55.5 57 35.1
MBI06_g04283_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 6.7e-06 55.5 57 36.8
PSO357G0552 Papaver somniferum HOM05D000023 ORTHO05D000014 6.7e-06 55.5 61 37.7


User provided reference genes

Program Settings