Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00294 Eucalyptus grandis HOM05D000665 ORTHO05D000285 6.3e-149 530.8 278 100.0
Eucgr.E03604 Eucalyptus grandis HOM05D000665 ORTHO05D000285 7.8e-139 497.3 320 84.1
Eucgr.G02213 Eucalyptus grandis HOM05D000665 ORTHO05D000285 9.5e-121 437.2 310 76.5
Eucgr.L02923 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.0e-74 282.7 322 49.1
Eucgr.F01358 Eucalyptus grandis HOM05D000665 ORTHO05D000285 8.7e-74 281.2 318 50.3
Eucgr.I00904 Eucalyptus grandis HOM05D000665 ORTHO05D000285 5.7e-73 278.5 305 52.1
Eucgr.K03095 Eucalyptus grandis HOM05D000665 ORTHO05D000921 6.3e-72 275.0 315 50.5
Eucgr.H00842 Eucalyptus grandis HOM05D000665 ORTHO05D000285 9.7e-57 224.6 215 54.4
Eucgr.B02784 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.5e-54 215.7 321 40.2
Eucgr.H04051 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.5e-54 215.7 300 41.7
Eucgr.L00423 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.5e-54 215.7 320 40.9
Eucgr.B02483 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.2e-52 209.1 325 40.3
Eucgr.B02958 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.0e-50 203.0 316 38.3
Eucgr.F03745 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.3e-48 197.6 320 36.9
Eucgr.E03640 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.4e-41 172.9 246 39.0
Eucgr.C01733 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.6e-35 152.9 245 39.2
Eucgr.L02702 Eucalyptus grandis HOM05D000665 ORTHO05D000285 9.8e-33 144.8 152 48.0
Eucgr.K03150 Eucalyptus grandis HOM05D000665 ORTHO05D000285 6.3e-32 142.1 265 37.0
Eucgr.A00912 Eucalyptus grandis HOM05D000665 ORTHO05D000285 7.7e-30 135.2 141 51.8
Eucgr.J02681 Eucalyptus grandis HOM05D000665 ORTHO05D000921 2.3e-21 107.1 221 36.7
Eucgr.K00902 Eucalyptus grandis HOM05D000665 ORTHO05D000285 6.8e-18 95.5 68 58.8
Nn5g29893 Nelumbo nucifera HOM05D000665 ORTHO05D000140 6.8e-18 95.5 299 28.1
Eucgr.E03218 Eucalyptus grandis HOM05D000665 ORTHO05D000285 8.6e-13 78.6 73 56.2
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 1.1e-12 78.2 313 23.0
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 2.3e-10 70.5 300 23.3
TWI09G1246 Tripterygium wilfordii HOM05D000665 ORTHO05D000921 4.0e-10 69.7 129 33.3
TWI56G1057 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 4.0e-10 69.7 115 31.3
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.5e-09 67.8 308 26.3
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 4.4e-09 66.2 126 32.5
CSS0046487 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.3e-08 64.7 283 26.9
Nn5g30764 Nelumbo nucifera HOM05D000665 ORTHO05D003147 1.7e-08 64.3 311 25.4
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 2.9e-08 63.5 274 24.5
FAN27G2099 Fragaria x ananassa HOM05D000665 ORTHO05D000140 2.9e-08 63.5 72 41.7
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.7e-08 63.2 302 26.2
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 3.7e-08 63.2 296 25.0
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-08 63.2 131 32.1
Hund13763 Selenicereus undatus HOM05D000665 ORTHO05D000921 3.7e-08 63.2 121 31.4
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 4.9e-08 62.8 313 24.3
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 4.9e-08 62.8 313 24.3
QL06p051064 Quercus lobata HOM05D000665 ORTHO05D003147 4.9e-08 62.8 130 27.7
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.4e-08 62.4 296 24.7
FvH4_2g38660 Fragaria vesca HOM05D000665 ORTHO05D000140 6.4e-08 62.4 72 40.3
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 6.4e-08 62.4 72 40.3
Glyma.19G073700 Glycine max HOM05D000876 ORTHO05D000285 8.3e-08 62.0 115 28.7
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 1.1e-07 61.6 135 31.1
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 1.1e-07 61.6 135 31.1
FAN15G1296 Fragaria x ananassa HOM05D000665 ORTHO05D003147 1.1e-07 61.6 72 40.3
PSO675G3606 Papaver somniferum HOM05D000665 ORTHO05D003147 1.1e-07 61.6 64 37.5
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.4e-07 61.2 126 29.4
PSO541G5140 Papaver somniferum HOM05D000665 ORTHO05D003147 1.4e-07 61.2 70 37.1
Glyma.01G164400 Glycine max HOM05D000665 ORTHO05D003147 1.9e-07 60.8 60 45.0
Glyma.11G078600 Glycine max HOM05D000665 ORTHO05D003147 1.9e-07 60.8 60 45.0
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.4e-07 60.5 98 34.7
CANSAT21G1611 Cannabis sativa HOM05D007209 ORTHO05D000921 3.2e-07 60.1 92 37.0
Lj2g0027355 Lotus japonicus HOM05D000665 ORTHO05D003147 3.2e-07 60.1 60 43.3
Psat0s6520g0080 Pisum sativum HOM05D000665 ORTHO05D003147 3.2e-07 60.1 137 27.7
Psat2g153240 Pisum sativum HOM05D000665 ORTHO05D003147 3.2e-07 60.1 137 27.7
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.1e-07 59.7 315 24.1
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 4.1e-07 59.7 126 31.7
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 4.1e-07 59.7 127 28.3
vmacro22150 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 4.1e-07 59.7 57 43.9
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 5.4e-07 59.3 315 22.9
PGSC0003DMG400023886 Solanum tuberosum HOM05D000665 ORTHO05D003147 5.4e-07 59.3 55 47.3
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 7.1e-07 58.9 315 23.2
Haze_03733 Corylus avellana HOM05D000665 ORTHO05D003147 7.1e-07 58.9 57 45.6
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.1e-07 58.9 127 28.3
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 9.2e-07 58.5 129 31.8
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 9.2e-07 58.5 142 26.8
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 9.2e-07 58.5 265 23.4
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 9.2e-07 58.5 144 26.4
Migut.H02178 Erythranthe guttata HOM05D000665 ORTHO05D003147 9.2e-07 58.5 297 22.9
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 9.2e-07 58.5 60 40.0
Ca_24919_v3 Cicer arietinum L. HOM05D000665 ORTHO05D003147 1.2e-06 58.2 60 41.7
Glyma.18G191100 Glycine max HOM05D000876 ORTHO05D000285 1.2e-06 58.2 98 30.6
PSO017G6967 Papaver somniferum HOM05D000665 ORTHO05D003147 1.2e-06 58.2 137 29.2
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 1.6e-06 57.8 323 22.9
Dinv33653 Davidia involucrata HOM05D000665 ORTHO05D003147 1.6e-06 57.8 57 43.9
Medtr5g022570 Medicago truncatula HOM05D000665 ORTHO05D003147 1.6e-06 57.8 60 40.0
Psat0s4120g0080 Pisum sativum HOM05D000665 ORTHO05D003147 1.6e-06 57.8 60 41.7
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.6e-06 57.8 125 31.2
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.1e-06 57.4 310 22.9
Prupe.7G171400 Prunus persica HOM05D000665 ORTHO05D003147 2.1e-06 57.4 60 41.7
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 2.1e-06 57.4 59 42.4
Solyc02g061940.4 Solanum lycopersicum HOM05D000665 ORTHO05D003147 2.1e-06 57.4 55 45.5
Sopen02g012900 Solanum pennellii HOM05D000665 ORTHO05D003147 2.1e-06 57.4 55 45.5
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 2.7e-06 57.0 284 25.7
AUR62012087 Chenopodium quinoa HOM05D000665 ORTHO05D000921 2.7e-06 57.0 120 25.0
AUR62039377 Chenopodium quinoa HOM05D000665 ORTHO05D000921 2.7e-06 57.0 120 25.0
Phvul.002G106800 Phaseolus vulgaris HOM05D000665 ORTHO05D003147 2.7e-06 57.0 60 41.7
VMungo1215G1134 Vigna mungo HOM05D000665 ORTHO05D003147 2.7e-06 57.0 60 41.7
Atru.chr12.253 Acer truncatum HOM05D000876 ORTHO05D000285 3.5e-06 56.6 68 36.8
Aqoxy5G00628 Aquilegia oxysepala HOM05D000665 ORTHO05D003147 3.5e-06 56.6 84 32.1
CSS0015007 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 3.5e-06 56.6 145 24.1
CSS0018305 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 3.5e-06 56.6 57 40.4
Ca_11671_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000140 3.5e-06 56.6 137 24.1
Medtr1g055365 Medicago truncatula HOM05D000665 ORTHO05D000140 3.5e-06 56.6 137 24.8
PSO384G1326 Papaver somniferum HOM05D000665 ORTHO05D003147 3.5e-06 56.6 131 29.0
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 4.6e-06 56.2 57 42.1
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 4.6e-06 56.2 57 42.1
Cpa.g.sc6.284 Carica papaya HOM05D000665 ORTHO05D003147 4.6e-06 56.2 57 42.1
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 4.6e-06 56.2 324 21.6
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 4.6e-06 56.2 143 26.6
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 4.6e-06 56.2 325 24.0
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 4.6e-06 56.2 325 24.0
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 4.6e-06 56.2 315 22.2
Nitab4.5_0000072g0060 Nicotiana tabacum HOM05D000876 ORTHO05D000285 4.6e-06 56.2 76 38.2
PSO384G2875 Papaver somniferum HOM05D000665 ORTHO05D003147 4.6e-06 56.2 137 28.5
PSO541G6499 Papaver somniferum HOM05D000665 ORTHO05D003147 4.6e-06 56.2 137 28.5
Potri.002G023800 Populus trichocarpa HOM05D000665 ORTHO05D003147 4.6e-06 56.2 72 34.7
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.6e-06 56.2 292 22.6
MELO3C034962.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.0e-06 55.8 86 34.9
Nitab4.5_0000062g0080 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.0e-06 55.8 71 40.8
Nitab4.5_0012930g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 6.0e-06 55.8 81 37.0
TPR.G10520 Trifolium pratense HOM05D000665 ORTHO05D003147 6.0e-06 55.8 60 40.0
TWI09G0766 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 6.0e-06 55.8 57 43.9
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 6.0e-06 55.8 125 31.2
DCAR_014037 Daucus carota HOM05D000665 ORTHO05D003147 7.8e-06 55.5 60 40.0
Lj1g0024899 Lotus japonicus HOM05D000665 ORTHO05D000921 7.8e-06 55.5 124 28.2
Lj2g0008174 Lotus japonicus HOM05D000876 ORTHO05D000285 7.8e-06 55.5 87 32.2
PSO716G0001 Papaver somniferum HOM05D000665 ORTHO05D003147 7.8e-06 55.5 137 29.2
TWI75G0526 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 7.8e-06 55.5 132 27.3


User provided reference genes

Program Settings