Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00210 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.6e-45 184.5 89 100.0
Eucgr.F00211 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.2e-19 99.8 72 65.3
Eucgr.I00166 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.7e-18 95.9 64 71.9
Eucgr.I00167 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.7e-18 95.9 64 71.9
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 3.7e-10 68.2 69 44.9
Cfa010162 Carpinus fangiana HOM05D009680 ORTHO05D000653 8.3e-10 67.0 69 43.5
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 1.4e-09 66.2 70 48.6
Gohir.A05G281850 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.4e-09 66.2 68 44.1
Gohir.A05G281700 Gossypium hirsutum HOM05D001004 ORTHO05D000653 2.4e-09 65.5 68 44.1
Oeu002604.1 Olea europaea HOM05D001004 ORTHO05D000653 3.1e-09 65.1 61 55.7
Nitab4.5_0000302g0080 Nicotiana tabacum HOM05D001004 ORTHO05D000653 4.1e-09 64.7 60 51.7
Gohir.D05G283088 Gossypium hirsutum HOM05D001004 ORTHO05D000653 5.4e-09 64.3 68 42.6
Gorai.009G297200 Gossypium raimondii HOM05D001004 ORTHO05D000653 5.4e-09 64.3 68 42.6
Gorai.009G297400 Gossypium raimondii HOM05D001004 ORTHO05D000653 5.4e-09 64.3 68 42.6
Cc03_g04970 Coffea canephora HOM05D001004 ORTHO05D000653 9.2e-09 63.5 62 53.2
Gorai.009G297300 Gossypium raimondii HOM05D001004 ORTHO05D000653 9.2e-09 63.5 68 42.6
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.2e-08 63.2 69 40.6
Gohir.A05G281800 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.6e-08 62.8 68 42.6
Dinv44644 Davidia involucrata HOM05D001004 ORTHO05D000653 3.5e-08 61.6 61 54.1
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 3.5e-08 61.6 60 53.3
Eucgr.D01653 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.5e-08 61.2 71 45.1
BolC3t14835H Brassica oleracea HOM05D001004 ORTHO05D000653 5.9e-08 60.8 69 43.5
CiPaw.01G189700 Carya illinoinensis HOM05D001004 ORTHO05D000653 5.9e-08 60.8 60 50.0
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.9e-08 60.8 69 46.4
CiPaw.01G189600 Carya illinoinensis HOM05D001004 ORTHO05D000653 7.8e-08 60.5 60 50.0
Haze_10651 Corylus avellana HOM05D001004 ORTHO05D000653 7.8e-08 60.5 64 43.8
Migut.A00979 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.0e-07 60.1 69 44.9
FAN12G2763 Fragaria x ananassa HOM05D001004 ORTHO05D000653 1.0e-07 60.1 65 47.7
Sabra10G0033600 Salix brachista HOM05D001004 ORTHO05D000653 1.0e-07 60.1 62 50.0
Haze_19482 Corylus avellana HOM05D001004 ORTHO05D000653 1.3e-07 59.7 62 48.4
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.7e-07 59.3 74 44.6
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 1.7e-07 59.3 69 46.4
QL06p015886 Quercus lobata HOM05D001004 ORTHO05D000653 1.7e-07 59.3 60 46.7
Migut.A00977 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.3e-07 58.9 60 48.3
Hma1.2p1_0650F.1_g195520 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 2.3e-07 58.9 60 51.7
COL.COLO4_12159 Corchorus olitorius HOM05D001004 ORTHO05D000653 2.9e-07 58.5 60 48.3
Migut.A00975 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.9e-07 58.5 60 46.7
Medtr1g075410 Medicago truncatula HOM05D001004 ORTHO05D000653 2.9e-07 58.5 62 48.4
COL.COLO4_12153 Corchorus olitorius HOM05D001004 ORTHO05D000653 3.9e-07 58.2 63 47.6
Sabra10G0033100 Salix brachista HOM05D001004 ORTHO05D000653 3.9e-07 58.2 60 51.7
Sabra10G0033300 Salix brachista HOM05D001004 ORTHO05D000653 3.9e-07 58.2 60 51.7
Sabra10G0033500 Salix brachista HOM05D001004 ORTHO05D000653 3.9e-07 58.2 60 51.7
Sp2g08390 Schrenkiella parvula HOM05D001004 ORTHO05D000653 3.9e-07 58.2 67 37.3
ECA248G1252 Erigeron canadensis HOM05D001004 ORTHO05D000653 5.0e-07 57.8 60 45.0
arahy.Tifrunner.gnm1.ann1.KV3BZC Arachis hypogaea HOM05D001004 ORTHO05D000653 6.6e-07 57.4 60 50.0
HanXRQChr01g0005211 Helianthus annuus HOM05D001004 ORTHO05D000653 6.6e-07 57.4 69 40.6
TPR.G31261 Trifolium pratense HOM05D001004 ORTHO05D000653 6.6e-07 57.4 62 45.2
AT5G43580 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 8.6e-07 57.0 70 37.1
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 8.6e-07 57.0 64 43.8
HanXRQChr01g0007331 Helianthus annuus HOM05D001004 ORTHO05D000653 8.6e-07 57.0 64 40.6
Potri.010G075200 Populus trichocarpa HOM05D001004 ORTHO05D000653 8.6e-07 57.0 60 50.0
Potri.010G075300 Populus trichocarpa HOM05D001004 ORTHO05D000653 8.6e-07 57.0 60 50.0
arahy.Tifrunner.gnm1.ann1.T5EZBY Arachis hypogaea HOM05D001004 ORTHO05D000653 1.1e-06 56.6 60 48.3
COL.COLO4_35913 Corchorus olitorius HOM05D001004 ORTHO05D000653 1.1e-06 56.6 66 39.4
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.1e-06 56.6 74 44.6
TAR633G2777 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.1e-06 56.6 60 45.0
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 1.5e-06 56.2 72 44.4
Glyma.09G103800 Glycine max HOM05D001004 ORTHO05D000653 1.5e-06 56.2 62 43.5
Lalb_Chr21g0312251 Lupinus albus HOM05D001004 ORTHO05D000653 1.5e-06 56.2 60 48.3
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 1.5e-06 56.2 68 39.7
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 1.5e-06 56.2 71 39.4
Carub.0003s2826 Capsella rubella HOM05D001004 ORTHO05D000653 1.9e-06 55.8 72 34.7
ClCG02G012910 Citrullus lanatus HOM05D001004 ORTHO05D000653 1.9e-06 55.8 71 36.6
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.9e-06 55.8 65 41.5
MD13G1208500 Malus domestica HOM05D001004 ORTHO05D000653 1.9e-06 55.8 62 45.2
Medtr1g075340 Medicago truncatula HOM05D001004 ORTHO05D000653 1.9e-06 55.8 62 46.8
Sabra10G0033000 Salix brachista HOM05D001004 ORTHO05D000653 1.9e-06 55.8 60 51.7
Sabra10G0033200 Salix brachista HOM05D001004 ORTHO05D000653 1.9e-06 55.8 60 51.7
Sabra10G0033400 Salix brachista HOM05D001004 ORTHO05D000653 1.9e-06 55.8 60 51.7
TAR636G3448 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.9e-06 55.8 64 43.8
Migut.A00978 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.5e-06 55.5 62 43.5
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.5e-06 55.5 71 42.3
Lalb_Chr21g0312271 Lupinus albus HOM05D001004 ORTHO05D000653 2.5e-06 55.5 62 45.2
Nn3g19560 Nelumbo nucifera HOM05D001004 ORTHO05D000653 2.5e-06 55.5 69 39.1
Potri.010G075501 Populus trichocarpa HOM05D001004 ORTHO05D000653 2.5e-06 55.5 60 48.3
Solyc01g108390.3 Solanum lycopersicum HOM05D011801 ORTHO05D014157 2.5e-06 55.5 65 43.1
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 3.3e-06 55.1 68 42.6
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 3.3e-06 55.1 70 38.6
CSS0013364 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 3.3e-06 55.1 66 45.5
CSS0031008 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 3.3e-06 55.1 60 46.7
Nn1g02639 Nelumbo nucifera HOM05D001004 ORTHO05D000653 3.3e-06 55.1 66 47.0
Potri.010G075400 Populus trichocarpa HOM05D001004 ORTHO05D000653 3.3e-06 55.1 61 50.8
Sopen01g050610 Solanum pennellii HOM05D011801 ORTHO05D014157 3.3e-06 55.1 65 43.1
Peaxi162Scf00325g00711 Petunia axillaris HOM05D001004 ORTHO05D000653 4.3e-06 54.7 62 41.9
Psat4g107840 Pisum sativum HOM05D001004 ORTHO05D000653 4.3e-06 54.7 60 45.0
Prupe.8G229400 Prunus persica HOM05D001004 ORTHO05D000653 4.3e-06 54.7 60 45.0
Carub.0008s0506 Capsella rubella HOM05D001004 ORTHO05D000653 5.6e-06 54.3 67 37.3
Glyma.20G205900 Glycine max HOM05D001004 ORTHO05D000653 5.6e-06 54.3 62 45.2
Hma1.2p1_0310F.1_g120850 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 5.6e-06 54.3 60 45.0
Hma1.2p1_0310F.1_g120860 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 5.6e-06 54.3 65 46.2
Hma1.2p1_0650F.1_g195540 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 5.6e-06 54.3 62 50.0
Nitab4.5_0006346g0020 Nicotiana tabacum HOM05D001004 ORTHO05D000653 5.6e-06 54.3 60 43.3
Carub.0004s2093 Capsella rubella HOM05D001004 ORTHO05D000653 7.3e-06 53.9 65 44.6
CARHR155430 Cardamine hirsuta HOM05D001004 ORTHO05D000653 7.3e-06 53.9 70 34.3
COL.COLO4_05576 Corchorus olitorius HOM05D001004 ORTHO05D000653 7.3e-06 53.9 65 41.5
Nn3g18475 Nelumbo nucifera HOM05D001004 ORTHO05D000653 7.3e-06 53.9 62 46.8
RcHm_v2.0_Chr4g0391001 Rosa chinensis HOM05D001004 ORTHO05D000653 7.3e-06 53.9 65 44.6
EL10Ac5g10440 Beta vulgaris HOM05D001004 ORTHO05D000653 9.5e-06 53.5 60 43.3
COL.COLO4_38470 Corchorus olitorius HOM05D001004 ORTHO05D000653 9.5e-06 53.5 61 49.2
ECA238G0152 Erigeron canadensis HOM05D001004 ORTHO05D000653 9.5e-06 53.5 60 45.0
Migut.A00976 Erythranthe guttata HOM05D001004 ORTHO05D000653 9.5e-06 53.5 60 46.7
Gohir.D11G134200 Gossypium hirsutum HOM05D001004 ORTHO05D000653 9.5e-06 53.5 62 41.9
Gorai.007G143500 Gossypium raimondii HOM05D001004 ORTHO05D000653 9.5e-06 53.5 62 41.9
HanXRQChr01g0007401 Helianthus annuus HOM05D001004 ORTHO05D000653 9.5e-06 53.5 60 41.7
Potri.005G221000 Populus trichocarpa HOM05D001004 ORTHO05D000653 9.5e-06 53.5 67 40.3
TPR.G18577 Trifolium pratense HOM05D001004 ORTHO05D000653 9.5e-06 53.5 60 46.7


User provided reference genes

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