Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 6.7e-158 560.8 327 100.0
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 4.7e-135 485.0 328 86.9
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 3.0e-134 482.3 326 77.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 4.0e-134 481.9 327 70.9
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 5.2e-134 481.5 328 86.6
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 2.8e-132 475.7 328 85.7
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 3.7e-132 475.3 326 85.0
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 3.7e-132 475.3 328 84.5
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 4.8e-132 474.9 327 86.2
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 8.3e-132 474.2 327 85.9
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.1e-131 473.8 328 85.1
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.1e-131 473.8 328 85.4
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 4.1e-131 471.9 327 69.4
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.2e-130 470.3 328 84.8
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.2e-130 470.3 326 84.7
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.2e-130 470.3 327 84.4
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.5e-130 468.8 326 84.4
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 4.5e-130 468.4 326 84.4
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 1.0e-129 467.2 327 83.8
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.7e-129 466.5 326 69.6
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 2.3e-129 466.1 325 70.8
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 3.8e-129 465.3 328 84.1
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.5e-128 463.4 328 83.2
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 1.9e-128 463.0 326 83.1
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.9e-128 463.0 328 81.1
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 3.3e-128 462.2 328 72.6
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 5.5e-128 461.5 327 83.5
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 7.2e-128 461.1 327 84.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 7.2e-128 461.1 328 81.4
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 7.2e-128 461.1 328 71.0
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.6e-127 459.9 324 79.9
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.6e-127 459.9 328 82.9
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.6e-127 459.9 324 68.8
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 3.6e-127 458.8 325 66.5
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.0e-126 457.2 328 68.0
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 1.0e-126 457.2 328 83.8
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.4e-126 456.8 321 68.2
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.8e-126 456.4 329 67.8
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.8e-126 456.4 328 74.4
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 4.0e-126 455.3 328 66.8
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 5.2e-126 454.9 327 82.6
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 5.2e-126 454.9 328 80.2
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 6.8e-126 454.5 324 71.6
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 1.2e-125 453.8 328 81.1
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 2.6e-125 452.6 328 81.4
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.6e-125 452.6 328 67.7
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 3.4e-125 452.2 330 79.1
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 5.7e-125 451.4 327 81.3
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 9.8e-125 450.7 328 83.5
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 9.8e-125 450.7 328 80.8
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 1.7e-124 449.9 324 66.7
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 1.7e-124 449.9 326 81.6
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 2.2e-124 449.5 328 79.6
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 6.3e-124 448.0 328 80.5
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.8e-123 446.4 328 81.1
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 7.0e-123 444.5 328 66.8
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 9.2e-123 444.1 326 66.0
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 9.2e-123 444.1 327 80.4
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 9.2e-123 444.1 324 67.3
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 2.0e-122 443.0 322 66.1
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 3.5e-122 442.2 324 80.9
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 5.9e-122 441.4 330 80.9
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 5.9e-122 441.4 325 65.8
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 3.9e-121 438.7 328 79.3
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 1.1e-120 437.2 236 86.0
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.9e-120 436.4 323 73.1
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 2.5e-120 436.0 322 78.6
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 2.5e-120 436.0 327 78.9
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.5e-120 436.0 327 79.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 4.3e-120 435.3 325 66.2
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.3e-120 435.3 327 78.9
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.5e-120 434.1 327 71.9
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 3.6e-119 432.2 325 65.5
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.0e-118 430.6 328 64.3
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 3.1e-118 429.1 323 79.6
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 4.0e-118 428.7 329 76.6
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.2e-117 427.2 323 63.5
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.5e-117 426.8 323 68.7
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 2.6e-117 426.0 236 83.5
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 2.6e-117 426.0 236 82.2
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 7.5e-117 424.5 323 63.5
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.3e-116 423.7 368 58.7
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.7e-116 423.3 323 62.8
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 2.2e-116 422.9 323 62.8
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 3.7e-116 422.2 323 62.5
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.9e-115 419.9 236 82.2
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.2e-115 419.1 327 76.8
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 4.3e-112 408.7 321 60.7
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.1e-110 404.1 331 73.7
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 3.1e-110 402.5 324 60.5
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 8.3e-108 394.4 319 74.3
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.0e-105 387.5 311 74.9
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.9e-105 385.6 358 57.3
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 5.1e-105 385.2 318 59.7
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 8.6e-105 384.4 231 75.8
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.3e-102 376.3 328 73.8
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.3e-97 360.5 325 53.2
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 1.2e-95 354.0 324 68.5
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.2e-95 354.0 260 67.3
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 4.7e-95 352.1 321 68.2
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 5.2e-94 348.6 280 80.7
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.2e-93 347.4 263 82.5
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 7.3e-88 328.2 271 76.0
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 9.9e-85 317.8 246 65.4
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.6e-82 308.9 251 80.5
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 6.4e-76 288.5 247 76.9
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.7e-68 263.8 374 38.5
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 3.2e-67 259.6 247 71.7
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 7.4e-64 248.4 228 55.3
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.4e-62 243.4 191 63.9
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 4.2e-59 232.6 192 57.3
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 2.1e-58 230.3 330 44.5
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 8.7e-57 224.9 138 76.1
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 7.9e-50 201.8 117 77.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.9e-49 199.5 124 71.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.0e-40 170.6 94 80.9
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 9.4e-19 98.6 87 63.2
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 8.3e-15 85.5 59 64.4
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 6.8e-09 65.9 95 43.2
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.1e-06 58.5 42 59.5
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 5.4e-06 56.2 41 61.0


User provided reference genes

Program Settings