Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 1.4e-77 293.1 177 100.0
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 2.4e-24 116.3 92 64.1
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 1.2e-23 114.0 91 62.6
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 4.5e-23 112.1 99 57.6
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 1.0e-22 110.9 94 59.6
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 1.7e-22 110.2 94 62.8
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 1.7e-22 110.2 89 59.6
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 2.9e-22 109.4 92 59.8
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 3.8e-22 109.0 91 61.5
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 6.5e-22 108.2 97 56.7
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.1e-21 107.5 96 57.3
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 1.9e-21 106.7 86 62.8
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 1.9e-21 106.7 86 62.8
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 1.9e-21 106.7 86 62.8
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.9e-21 106.7 95 55.8
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 2.5e-21 106.3 86 59.3
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 3.2e-21 105.9 103 57.3
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 4.2e-21 105.5 86 60.5
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 4.2e-21 105.5 85 60.0
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 4.2e-21 105.5 53 88.7
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 4.2e-21 105.5 92 53.3
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 5.5e-21 105.1 89 60.7
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 5.5e-21 105.1 87 60.9
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 5.5e-21 105.1 86 60.5
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 5.5e-21 105.1 87 60.9
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 5.5e-21 105.1 87 60.9
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 5.5e-21 105.1 86 61.6
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 5.5e-21 105.1 90 57.8
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 5.5e-21 105.1 90 61.1
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 7.1e-21 104.8 97 55.7
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 9.3e-21 104.4 91 57.1
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 9.3e-21 104.4 86 59.3
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 9.3e-21 104.4 52 90.4
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 9.3e-21 104.4 52 90.4
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 9.3e-21 104.4 90 61.1
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 1.2e-20 104.0 104 52.9
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.2e-20 104.0 85 60.0
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.2e-20 104.0 90 60.0
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 1.6e-20 103.6 94 56.4
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 1.6e-20 103.6 52 88.5
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 1.6e-20 103.6 89 56.2
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 2.1e-20 103.2 88 61.4
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 2.7e-20 102.8 91 54.9
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 2.7e-20 102.8 52 88.5
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 2.7e-20 102.8 98 56.1
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 3.5e-20 102.4 86 58.1
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 3.5e-20 102.4 56 80.4
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 3.5e-20 102.4 92 57.6
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 6.0e-20 101.7 95 58.9
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 6.0e-20 101.7 58 77.6
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 7.9e-20 101.3 86 58.1
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 7.9e-20 101.3 90 55.6
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 1.0e-19 100.9 90 53.3
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 1.3e-19 100.5 95 55.8
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 1.3e-19 100.5 95 56.8
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 1.3e-19 100.5 90 60.0
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 2.3e-19 99.8 92 57.6
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 3.0e-19 99.4 52 82.7
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 3.0e-19 99.4 52 86.5
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 3.0e-19 99.4 94 60.6
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 3.0e-19 99.4 94 60.6
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 3.0e-19 99.4 90 56.7
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 3.9e-19 99.0 61 73.8
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 3.9e-19 99.0 94 60.6
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 5.1e-19 98.6 60 78.3
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 6.7e-19 98.2 100 50.0
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 8.7e-19 97.8 54 81.5
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 1.1e-18 97.4 96 54.2
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.1e-18 97.4 52 84.6
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 1.5e-18 97.1 56 75.0
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 1.5e-18 97.1 56 75.0
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 2.5e-18 96.3 53 83.0
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 2.5e-18 96.3 92 54.3
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 2.5e-18 96.3 100 52.0
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 3.3e-18 95.9 56 75.0
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 5.7e-18 95.1 48 85.4
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 7.4e-18 94.7 56 75.0
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 9.6e-18 94.4 50 82.0
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 9.6e-18 94.4 56 76.8
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 1.3e-17 94.0 93 50.5
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 4.8e-17 92.0 52 84.6
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 6.2e-17 91.7 95 49.5
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.1e-16 90.9 49 81.6
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 2.4e-16 89.7 86 57.0
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 3.1e-16 89.4 89 52.8
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 5.3e-16 88.6 57 68.4
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 5.3e-16 88.6 86 53.5
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 6.9e-16 88.2 86 51.2
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 9.0e-16 87.8 60 70.0
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 1.5e-15 87.0 86 55.8
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 3.4e-15 85.9 54 68.5
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 4.5e-15 85.5 92 48.9
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 4.5e-15 85.5 92 48.9
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 4.5e-15 85.5 54 66.7
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 5.8e-15 85.1 98 46.9
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 5.8e-15 85.1 89 60.7
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.0e-14 84.3 86 55.8
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.0e-14 84.3 86 55.8
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 1.0e-14 84.3 82 57.3
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 3.8e-14 82.4 100 46.0
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 1.4e-13 80.5 86 54.7
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.9e-13 80.1 60 63.3
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 1.6e-12 77.0 44 77.3
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 2.7e-12 76.3 90 46.7
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 4.3e-10 68.9 49 69.4
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 5.7e-10 68.6 51 64.7
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 7.4e-10 68.2 51 64.7
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 6.3e-09 65.1 86 43.0
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 4.1e-08 62.4 51 54.9
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 3.4e-07 59.3 49 57.1
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 1.3e-06 57.4 57 50.9


User provided reference genes

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