Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00090 Eucalyptus grandis HOM05D002412 ORTHO05D002516 8.1e-83 310.5 168 100.0
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 3.4e-12 75.9 150 43.3
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 3.2e-10 69.3 138 41.3
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 1.2e-09 67.4 135 40.7
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 1.6e-09 67.0 150 47.3
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 2.0e-09 66.6 156 39.1
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 3.5e-09 65.9 144 40.3
CsaV3_2G026020 Cucumis sativus L. HOM05D002412 ORTHO05D002516 7.8e-09 64.7 169 36.1
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 1.3e-08 63.9 159 35.8
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 1.7e-08 63.5 150 37.3
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 5.0e-08 62.0 156 39.1
TWI56G0446 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 5.0e-08 62.0 146 37.0
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 8.6e-08 61.2 177 39.0
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 8.6e-08 61.2 187 39.0
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 1.5e-07 60.5 149 35.6
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 1.9e-07 60.1 188 39.9
TWI12G0423 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.9e-07 60.1 153 37.9
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 1.9e-07 60.1 148 36.5
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 2.5e-07 59.7 178 34.8
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 3.3e-07 59.3 155 36.8
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 3.3e-07 59.3 158 34.8
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.3e-07 59.3 159 33.3
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 3.3e-07 59.3 138 39.9
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 4.3e-07 58.9 138 39.1
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 5.6e-07 58.5 153 35.9
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 5.6e-07 58.5 159 33.3
Nitab4.5_0007781g0010 Nicotiana tabacum HOM05D002412 ORTHO05D002516 5.6e-07 58.5 150 39.3
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 5.6e-07 58.5 152 37.5
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 7.3e-07 58.2 154 35.1
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 7.3e-07 58.2 146 37.7
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 7.3e-07 58.2 159 33.3
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 7.3e-07 58.2 143 38.5
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 9.5e-07 57.8 150 38.7
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 9.5e-07 57.8 154 35.1
MELO3C016826.2 Cucumis melo HOM05D002412 ORTHO05D002516 1.2e-06 57.4 151 43.0
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.2e-06 57.4 144 38.9
TWI59G0380 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.2e-06 57.4 181 38.7
Gohir.A06G024600 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.6e-06 57.0 110 40.0
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 1.6e-06 57.0 167 36.5
TPR.G33675 Trifolium pratense HOM05D002412 ORTHO05D002516 1.6e-06 57.0 159 43.4
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.1e-06 56.6 150 35.3
Haze_22419 Corylus avellana HOM05D002412 ORTHO05D002516 2.8e-06 56.2 113 40.7
MELO3C010796.2 Cucumis melo HOM05D002412 ORTHO05D002516 2.8e-06 56.2 172 35.5
Gorai.010G026300 Gossypium raimondii HOM05D002412 ORTHO05D002516 2.8e-06 56.2 112 40.2
Atru.chr13.848 Acer truncatum HOM05D002412 ORTHO05D002516 3.6e-06 55.8 132 43.2
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 3.6e-06 55.8 164 34.8
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 4.7e-06 55.5 120 36.7
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 6.2e-06 55.1 128 38.3
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 6.2e-06 55.1 163 33.7
Gohir.D06G021700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 8.0e-06 54.7 112 40.2
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 8.0e-06 54.7 159 33.3
GSVIVG01009322001 Vitis vinifera HOM05D002412 ORTHO05D002516 8.0e-06 54.7 88 42.0


User provided reference genes

Program Settings