Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 4.3e-214 747.7 366 100.0
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 6.3e-213 743.8 366 99.5
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 2.1e-112 409.8 369 54.7
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 2.0e-110 403.3 370 53.5
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 9.3e-108 394.4 371 54.4
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 2.1e-107 393.3 368 53.0
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 8.7e-106 387.9 360 52.5
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 1.1e-105 387.5 370 52.7
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 3.3e-105 386.0 367 52.9
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 1.6e-104 383.6 363 51.5
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.1e-104 383.3 363 51.5
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 8.2e-104 381.3 367 51.0
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.6e-102 376.3 371 50.4
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 1.1e-97 360.9 368 48.6
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 1.5e-97 360.5 368 48.1
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 9.7e-97 357.8 366 50.3
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 1.3e-96 357.5 375 47.5
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 1.2e-91 340.9 368 48.4
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 1.5e-89 334.0 365 46.0
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 3.3e-89 332.8 342 48.0
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 9.4e-84 314.7 355 47.0
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 2.2e-80 303.5 373 44.8
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 3.2e-76 289.7 373 42.1
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 2.2e-72 276.9 259 54.1
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 3.7e-64 249.6 369 39.3
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 2.9e-61 240.0 374 37.4
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 1.2e-59 234.6 262 43.9
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 2.1e-51 207.2 292 40.1
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 3.2e-47 193.4 196 51.5
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 2.0e-41 174.1 202 45.0
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 7.8e-38 162.2 365 31.5
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 3.9e-37 159.8 335 33.1
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 8.1e-35 152.1 342 29.5
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 4.0e-34 149.8 314 31.5
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 7.5e-33 145.6 342 29.5
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 6.6e-29 132.5 354 28.8
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 6.2e-27 125.9 353 27.5
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 2.0e-25 120.9 105 54.3
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 3.4e-25 120.2 114 52.6
CBR_g6349 Chara braunii HOM05D000186 ORTHO05D000347 3.6e-19 100.1 269 26.4
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 9.9e-17 92.0 181 32.6
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 9.3e-15 85.5 98 49.0
ATR0168G001 Amborella trichopoda HOM05D008798 ORTHO05D011016 5.8e-09 66.2 48 60.4
BcaC07g42306 Brassica carinata HOM05D000488 ORTHO05D000347 4.9e-08 63.2 302 24.5
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 8.4e-08 62.4 48 52.1
Sc24g0004330 Simmondsia chinensis HOM05D000186 ORTHO05D005094 2.4e-07 60.8 297 25.9
A10p05370 Brassica napus HOM05D000186 ORTHO05D005094 5.4e-07 59.7 276 24.6
BraA10t42801Z Brassica rapa HOM05D000186 ORTHO05D005094 5.4e-07 59.7 276 24.6
A09p68570 Brassica napus HOM05D000488 ORTHO05D000347 1.2e-06 58.5 302 23.2
BcaC05g24650 Brassica carinata HOM05D000186 ORTHO05D005094 2.1e-06 57.8 282 26.2
BolC5t29267H Brassica oleracea HOM05D000186 ORTHO05D005094 2.7e-06 57.4 284 25.7
EL10Ac6g14492 Beta vulgaris HOM05D000488 ORTHO05D000347 7.9e-06 55.8 181 27.6
BcaB02g06757 Brassica carinata HOM05D000186 ORTHO05D005094 7.9e-06 55.8 282 25.9
HanXRQChr01g0003221 Helianthus annuus HOM05D000488 ORTHO05D000347 7.9e-06 55.8 241 25.7


User provided reference genes

Program Settings