Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 1.7e-221 772.3 372 100.0
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 2.3e-218 761.9 372 98.4
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 1.5e-166 589.7 370 75.7
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 1.9e-161 572.8 375 71.7
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 1.4e-159 566.6 381 72.2
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 6.9e-159 564.3 373 71.8
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 6.5e-157 557.8 377 70.6
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 8.5e-157 557.4 369 71.3
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 1.1e-156 557.0 367 72.5
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 6.1e-155 551.2 377 70.0
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 1.1e-153 547.0 373 69.7
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 2.5e-153 545.8 372 71.5
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 4.3e-153 545.0 372 68.0
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 4.3e-153 545.0 376 67.8
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 5.7e-153 544.7 372 68.0
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 7.4e-153 544.3 372 68.0
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 1.3e-152 543.5 372 70.4
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 2.8e-152 542.3 379 70.7
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 4.1e-151 538.5 381 68.8
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 5.3e-151 538.1 374 68.7
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 9.0e-151 537.3 377 70.3
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.5e-150 536.6 381 68.5
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 2.0e-150 536.2 377 69.5
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 1.3e-149 533.5 381 68.5
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.7e-149 533.1 382 68.6
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.7e-149 533.1 381 68.2
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 5.0e-149 531.6 377 68.4
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 1.1e-148 530.4 375 68.3
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 1.1e-148 530.4 377 67.1
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 4.2e-148 528.5 373 68.1
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 2.1e-147 526.2 375 66.1
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 2.1e-147 526.2 375 66.4
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 1.8e-146 523.1 396 64.4
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 1.8e-146 523.1 377 67.4
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 5.7e-145 518.1 374 65.0
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 1.1e-143 513.8 376 67.6
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 2.4e-143 512.7 377 66.6
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 7.7e-142 507.7 368 65.5
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 2.2e-141 506.1 380 62.9
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 2.9e-141 505.8 373 63.5
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 3.8e-141 505.4 370 63.8
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 3.2e-140 502.3 370 63.2
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 7.2e-140 501.1 372 63.2
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 1.6e-139 500.0 370 63.2
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 1.5e-137 493.4 369 64.8
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 2.0e-137 493.0 375 63.2
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 2.6e-137 492.7 376 61.7
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 3.3e-137 492.3 377 63.7
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.4e-137 491.9 381 64.6
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 1.3e-136 490.3 365 63.6
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 2.8e-136 489.2 380 62.6
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 2.8e-136 489.2 376 60.6
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 3.7e-136 488.8 376 60.9
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 8.2e-136 487.6 377 63.1
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 1.4e-135 486.9 376 63.8
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 2.4e-135 486.1 377 62.9
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 9.1e-135 484.2 368 62.0
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 1.2e-134 483.8 376 63.6
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 2.0e-134 483.0 375 61.1
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 4.5e-134 481.9 365 61.9
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 1.3e-133 480.3 352 65.9
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 3.8e-133 478.8 383 61.1
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 2.5e-132 476.1 363 60.9
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 1.2e-131 473.8 370 63.5
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 1.6e-131 473.4 356 62.9
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 4.7e-131 471.9 377 61.0
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 1.4e-130 470.3 357 61.9
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 4.0e-130 468.8 371 63.6
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 1.2e-129 467.2 380 61.3
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 1.2e-129 467.2 395 58.2
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 9.7e-129 464.2 378 59.8
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 1.6e-126 456.8 371 60.6
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 6.5e-125 451.4 380 62.6
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 1.1e-124 450.7 375 59.5
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 1.2e-121 440.7 373 57.4
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 4.4e-121 438.7 374 61.8
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 3.7e-120 435.6 373 57.1
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 4.1e-119 432.2 371 57.7
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 9.2e-111 404.4 237 78.1
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 1.9e-100 370.2 380 49.5
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 2.4e-95 353.2 386 49.2
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 2.0e-94 350.1 314 56.4
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 1.6e-91 340.5 408 46.8
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 9.2e-87 324.7 291 54.6
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 5.1e-85 318.9 355 51.3
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 1.1e-79 301.2 187 73.3
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 3.0e-77 293.1 379 41.4
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 5.8e-73 278.9 370 41.6
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 4.6e-70 269.2 226 58.8
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 3.9e-69 266.2 206 62.1
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 4.8e-67 259.2 322 42.9
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 6.9e-66 255.4 377 39.3
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 3.8e-64 249.6 222 55.4
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 9.3e-63 245.0 211 57.3
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 7.4e-60 235.3 406 36.2
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 8.1e-59 231.9 189 63.0
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 1.1e-58 231.5 148 69.6
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 4.0e-58 229.6 188 61.7
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 1.5e-57 227.6 248 48.8
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 9.9e-57 224.9 256 48.4
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 3.7e-51 206.5 209 54.1
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 3.7e-51 206.5 209 54.1
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 1.4e-50 204.5 190 55.8
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 3.9e-45 186.4 184 53.3
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 3.7e-43 179.9 125 64.0
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 4.1e-42 176.4 102 77.5
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 1.5e-41 174.5 143 60.1
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 1.0e-40 171.8 151 57.0
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 5.0e-40 169.5 149 61.7
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 5.5e-39 166.0 122 62.3
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 6.1e-38 162.5 267 38.6
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 1.5e-36 157.9 142 55.6
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 1.2e-30 138.3 172 46.5
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 5.3e-26 122.9 250 32.0
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 8.5e-24 115.5 103 48.5
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 3.9e-21 106.7 98 58.2
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 1.1e-20 105.1 78 65.4
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 2.2e-19 100.9 479 22.3
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 4.5e-17 93.2 75 56.0
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 8.5e-16 89.0 69 60.9
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 2.7e-14 84.0 160 40.0
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 3.6e-14 83.6 179 37.4
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 1.2e-12 78.6 102 51.0
arahy.Tifrunner.gnm1.ann1.PN7KIB Arachis hypogaea HOM05D006665 ORTHO05D018494 1.1e-07 62.0 44 63.6
arahy.Tifrunner.gnm1.ann1.IN0C4L Arachis hypogaea HOM05D006665 ORTHO05D012122 1.2e-06 58.5 105 41.9


User provided reference genes

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