Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E04269 Eucalyptus grandis HOM05D004469 ORTHO05D005429 2.6e-30 134.8 71 100.0
Eucgr.C04399 Eucalyptus grandis HOM05D004469 ORTHO05D005429 1.7e-13 79.0 46 89.1
Eucgr.L03187 Eucalyptus grandis HOM05D004469 ORTHO05D005429 1.7e-13 79.0 46 89.1
Eucgr.L03235 Eucalyptus grandis HOM05D004469 ORTHO05D005429 6.4e-13 77.0 46 87.0
TPR.G23109 Trifolium pratense HOM05D004469 ORTHO05D005429 2.1e-11 72.0 73 54.8
Duzib168G2148 Durio zibethinus HOM05D004469 ORTHO05D005429 2.7e-11 71.6 73 53.4
CiPaw.04G177500 Carya illinoinensis HOM05D004469 ORTHO05D005429 4.6e-11 70.9 46 73.9
Lj6g0024161 Lotus japonicus HOM05D004469 ORTHO05D005429 4.6e-11 70.9 46 73.9
Cpa.g.sc46.70 Carica papaya HOM05D004469 ORTHO05D005429 6.0e-11 70.5 46 73.9
Glyma.09G091700 Glycine max HOM05D004469 ORTHO05D005429 6.0e-11 70.5 73 56.2
Dinv41443 Davidia involucrata HOM05D004469 ORTHO05D005429 7.8e-11 70.1 46 71.7
MD15G1162100 Malus domestica HOM05D004469 ORTHO05D005429 1.0e-10 69.7 46 71.7
VMungo1309G2337 Vigna mungo HOM05D004469 ORTHO05D005429 1.3e-10 69.3 73 54.8
CSS0041761 Camellia sinensis var. sinensis HOM05D004469 ORTHO05D005429 1.7e-10 68.9 46 71.7
FAN23G0971 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.7e-10 68.9 46 69.6
FAN28G2138 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.7e-10 68.9 46 69.6
FAN28G2979 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.7e-10 68.9 46 69.6
Phvul.009G212100 Phaseolus vulgaris HOM05D004469 ORTHO05D005429 1.7e-10 68.9 73 54.8
Thecc.09G137700 Theobroma cacao HOM05D004469 ORTHO05D005429 3.0e-10 68.2 73 50.7
Duzib168G2240 Durio zibethinus HOM05D004469 ORTHO05D005429 3.9e-10 67.8 73 50.7
Psat1g021280 Pisum sativum HOM05D004469 ORTHO05D005429 3.9e-10 67.8 81 45.7
arahy.Tifrunner.gnm1.ann1.2E9WSC Arachis hypogaea HOM05D004469 ORTHO05D005429 5.1e-10 67.4 73 52.1
arahy.Tifrunner.gnm1.ann1.K75BJP Arachis hypogaea HOM05D004469 ORTHO05D005429 5.1e-10 67.4 73 52.1
Cfa002260 Carpinus fangiana HOM05D004469 ORTHO05D005429 5.1e-10 67.4 46 69.6
Duzib187G0975 Durio zibethinus HOM05D004469 ORTHO05D005429 5.1e-10 67.4 66 54.5
FvH4_1g01990 Fragaria vesca HOM05D004469 ORTHO05D005429 5.1e-10 67.4 46 67.4
FAN19G1855 Fragaria x ananassa HOM05D004469 ORTHO05D005429 5.1e-10 67.4 46 67.4
FAN26G0918 Fragaria x ananassa HOM05D004469 ORTHO05D005429 5.1e-10 67.4 46 67.4
QL02p090812 Quercus lobata HOM05D004469 ORTHO05D005429 5.1e-10 67.4 46 67.4
COL.COLO4_33364 Corchorus olitorius HOM05D004469 ORTHO05D005429 8.6e-10 66.6 73 49.3
Haze_25443 Corylus avellana HOM05D004469 ORTHO05D005429 8.6e-10 66.6 46 69.6
Gorai.004G109600 Gossypium raimondii HOM05D004469 ORTHO05D005429 8.6e-10 66.6 73 49.3
Glyma.15G198300 Glycine max HOM05D004469 ORTHO05D005429 1.1e-09 66.2 73 52.1
Gohir.D08G101600 Gossypium hirsutum HOM05D004469 ORTHO05D005429 1.1e-09 66.2 73 49.3
Medtr2g450730 Medicago truncatula HOM05D004469 ORTHO05D005429 1.1e-09 66.2 46 67.4
Rhsim03G0253400 Rhododendron simsii HOM05D004469 ORTHO05D005429 1.1e-09 66.2 46 71.7
Atru.chr7.2015 Acer truncatum HOM05D004469 ORTHO05D005429 1.5e-09 65.9 73 49.3
Lalb_Chr11g0073091 Lupinus albus HOM05D004469 ORTHO05D005429 1.5e-09 65.9 46 67.4
Prupe.7G257500 Prunus persica HOM05D004469 ORTHO05D005429 1.5e-09 65.9 46 65.2
Gohir.A08G091100 Gossypium hirsutum HOM05D004469 ORTHO05D005429 2.5e-09 65.1 73 49.3
RcHm_v2.0_Chr5g0061231 Rosa chinensis HOM05D004469 ORTHO05D005429 3.3e-09 64.7 46 67.4
Ca_03095_v3 Cicer arietinum L. HOM05D004469 ORTHO05D005429 4.3e-09 64.3 46 63.0
vmacro06114 Vaccinium macrocarpon HOM05D004469 ORTHO05D005429 4.3e-09 64.3 46 67.4
CANSAT11G1945 Cannabis sativa HOM05D004469 ORTHO05D005429 5.6e-09 63.9 46 60.9
Migut.J01235 Erythranthe guttata HOM05D004469 ORTHO05D005429 5.6e-09 63.9 46 67.4
RcHm_v2.0_Chr2g0087051 Rosa chinensis HOM05D004469 ORTHO05D005429 5.6e-09 63.9 46 65.2
GSVIVG01012860001 Vitis vinifera HOM05D004469 ORTHO05D005429 5.6e-09 63.9 46 65.2
Actinidia14229 Actinidia chinensis HOM05D004469 ORTHO05D005429 7.3e-09 63.5 45 64.4
Actinidia26357 Actinidia chinensis HOM05D004469 ORTHO05D005429 7.3e-09 63.5 45 64.4
AT2G12550 Arabidopsis thaliana HOM05D004469 ORTHO05D005429 7.3e-09 63.5 46 60.9
CAN.G1281.7 Capsicum annuum HOM05D004469 ORTHO05D005429 7.3e-09 63.5 46 65.2
SalBow1G3789 Salvia bowleyana HOM05D004469 ORTHO05D005429 7.3e-09 63.5 46 65.2
FvH4_3g33700 Fragaria vesca HOM05D004469 ORTHO05D005429 9.5e-09 63.2 45 66.7
FAN11G3069 Fragaria x ananassa HOM05D004469 ORTHO05D005429 9.5e-09 63.2 45 66.7
FAN25G0032 Fragaria x ananassa HOM05D004469 ORTHO05D005429 9.5e-09 63.2 45 66.7
Lj9C704T18 Lonicera japonica HOM05D004469 ORTHO05D005429 1.2e-08 62.8 46 60.9
Nn2g12194 Nelumbo nucifera HOM05D004469 ORTHO05D005429 1.2e-08 62.8 46 65.2
AL3G45030 Arabidopsis lyrata HOM05D004469 ORTHO05D005429 1.6e-08 62.4 46 58.7
arahy.Tifrunner.gnm1.ann1.FNUG0A Arachis hypogaea HOM05D004469 ORTHO05D005429 1.6e-08 62.4 46 67.4
Cc06_g07630 Coffea canephora HOM05D004469 ORTHO05D005429 1.6e-08 62.4 44 63.6
Manes.14G119700 Manihot esculenta HOM05D004469 ORTHO05D005429 1.6e-08 62.4 81 42.0
TAR625G0398 Trochodendron aralioides HOM05D004469 ORTHO05D005429 2.1e-08 62.0 45 66.7
arahy.Tifrunner.gnm1.ann1.T08WW4 Arachis hypogaea HOM05D004469 ORTHO05D005429 2.8e-08 61.6 46 65.2
Nitab4.5_0010073g0010 Nicotiana tabacum HOM05D004469 ORTHO05D005429 2.8e-08 61.6 66 53.0
TWI32G1222 Tripterygium wilfordii HOM05D004469 ORTHO05D005429 2.8e-08 61.6 46 63.0
Aa31sc54G60 Aethionema arabicum HOM05D004469 ORTHO05D005429 3.6e-08 61.2 46 60.9
Nitab4.5_0002845g0050 Nicotiana tabacum HOM05D004469 ORTHO05D005429 3.6e-08 61.2 46 63.0
FAN16G0997 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.7e-08 60.8 45 64.4
Nitab4.5_0002286g0020 Nicotiana tabacum HOM05D004469 ORTHO05D005429 4.7e-08 60.8 46 63.0
Carub.0003s2782 Capsella rubella HOM05D004469 ORTHO05D005429 6.2e-08 60.5 46 58.7
FAN21G2818 Fragaria x ananassa HOM05D004469 ORTHO05D005429 6.2e-08 60.5 45 64.4
PGR102G2677 Punica granatum HOM05D004469 ORTHO05D005429 6.2e-08 60.5 46 65.2
THA.LOC104808947 Tarenaya hassleriana HOM05D004469 ORTHO05D005429 8.1e-08 60.1 46 60.9
MSTRG.19616 Avicennia marina HOM05D004469 ORTHO05D005429 1.4e-07 59.3 46 65.2
Sp3g26680 Schrenkiella parvula HOM05D004469 ORTHO05D005429 1.4e-07 59.3 46 54.3
ClCG11G003510 Citrullus lanatus HOM05D004469 ORTHO05D005429 1.8e-07 58.9 46 60.9
Ciclev10007887m.g Citrus clementina HOM05D004469 ORTHO05D005429 1.8e-07 58.9 82 40.2
Sed0012323 Sechium edule HOM05D004469 ORTHO05D005429 1.8e-07 58.9 46 60.9
BcaC01g03128 Brassica carinata HOM05D004469 ORTHO05D005429 2.4e-07 58.5 46 54.3
BolC3t17859H Brassica oleracea HOM05D004469 ORTHO05D005429 2.4e-07 58.5 46 54.3
EL10Ac8g18788 Beta vulgaris HOM05D004469 ORTHO05D005429 3.1e-07 58.2 46 58.7
Lsat_1_v5_gn_5_92700 Lactuca sativa HOM05D004469 ORTHO05D005429 3.1e-07 58.2 46 63.0
MELO3C004484.2 Cucumis melo HOM05D004469 ORTHO05D005429 4.0e-07 57.8 46 58.7
CARHR105080 Cardamine hirsuta HOM05D004469 ORTHO05D005429 5.2e-07 57.4 46 52.2
ECA234G1865 Erigeron canadensis HOM05D004469 ORTHO05D005429 5.2e-07 57.4 46 58.7
A03p44900 Brassica napus HOM05D004469 ORTHO05D005429 6.8e-07 57.0 46 52.2
C03p55780 Brassica napus HOM05D004469 ORTHO05D005429 6.8e-07 57.0 46 52.2
BraA03t13626Z Brassica rapa HOM05D004469 ORTHO05D005429 6.8e-07 57.0 46 52.2
MBI14_g24228_MAGBIO Magnolia biondii HOM05D004469 ORTHO05D005429 6.8e-07 57.0 73 41.1
Sabra18G0099700 Salix brachista HOM05D004469 ORTHO05D005429 6.8e-07 57.0 46 58.7
Sabra18G0101500 Salix brachista HOM05D004469 ORTHO05D005429 6.8e-07 57.0 46 58.7
Potri.006G061500 Populus trichocarpa HOM05D004469 ORTHO05D005429 8.9e-07 56.6 46 58.7
Potri.018G118143 Populus trichocarpa HOM05D004469 ORTHO05D005429 8.9e-07 56.6 46 58.7
PGSC0003DMG400030724 Solanum tuberosum HOM05D004469 ORTHO05D005429 1.2e-06 56.2 46 56.5
BcaB08g34526 Brassica carinata HOM05D004469 ORTHO05D005429 1.5e-06 55.8 46 50.0
Thhalv10022623m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 1.5e-06 55.8 46 52.2
CsaV3_2G003380 Cucumis sativus L. HOM05D004469 ORTHO05D005429 2.0e-06 55.5 46 56.5
HanXRQChr10g0314151 Helianthus annuus HOM05D004469 ORTHO05D005429 2.6e-06 55.1 46 58.7
Solyc07g007370.3 Solanum lycopersicum HOM05D004469 ORTHO05D005429 3.4e-06 54.7 46 54.3
Sopen07g003440 Solanum pennellii HOM05D004469 ORTHO05D005429 3.4e-06 54.7 46 54.3
Oeu028017.1 Olea europaea HOM05D004469 ORTHO05D005429 4.4e-06 54.3 35 74.3
Thhalv10001944m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 5.8e-06 53.9 46 50.0
Peaxi162Scf00088g00521 Petunia axillaris HOM05D004469 ORTHO05D005429 5.8e-06 53.9 46 56.5
Hund09311 Selenicereus undatus HOM05D004469 ORTHO05D005429 5.8e-06 53.9 70 41.4
ATR0767G179 Amborella trichopoda HOM05D004469 ORTHO05D005429 7.6e-06 53.5 73 43.8
Sabra06G0044100 Salix brachista HOM05D004469 ORTHO05D005429 7.6e-06 53.5 46 54.3
unitig_27.g25106 Utricularia gibba HOM05D004469 ORTHO05D005429 7.6e-06 53.5 46 56.5
HPP92_003256 Vanilla planifolia HOM05D004469 ORTHO05D005429 7.6e-06 53.5 46 47.8
AUR62011228 Chenopodium quinoa HOM05D004469 ORTHO05D005429 9.9e-06 53.1 46 56.5


User provided reference genes

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