Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 9.8e-56 219.9 114 100.0
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.0e-37 157.5 119 76.5
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.1e-35 153.3 119 75.6
Eucgr.E04065 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.3e-35 151.4 122 70.5
Eucgr.E04060 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.2e-33 144.4 122 70.5
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.8e-33 144.1 122 70.5
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.8e-33 144.1 117 69.2
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.2e-13 80.1 125 45.6
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 2.7e-13 79.0 121 41.3
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 7.9e-13 77.4 119 43.7
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 5.1e-12 74.7 129 39.5
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 5.1e-12 74.7 121 43.0
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 5.1e-12 74.7 129 41.1
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 1.5e-11 73.2 125 42.4
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.9e-11 72.8 134 37.3
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 3.3e-11 72.0 119 40.3
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 3.3e-11 72.0 128 39.8
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 4.3e-11 71.6 130 42.3
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 5.6e-11 71.2 126 34.9
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 7.4e-11 70.9 126 36.5
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.4e-11 70.9 124 46.0
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 9.6e-11 70.5 140 42.1
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.6e-10 69.7 120 42.5
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.1e-10 69.3 121 39.7
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 2.1e-10 69.3 119 39.5
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.1e-10 69.3 127 40.9
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 4.8e-10 68.2 125 42.4
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 1.4e-09 66.6 112 41.1
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 1.4e-09 66.6 130 36.9
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.4e-09 66.6 130 36.9
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 1.8e-09 66.2 116 38.8
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.4e-09 65.9 137 40.9
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 3.1e-09 65.5 146 36.3
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 4.0e-09 65.1 109 46.8
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 5.3e-09 64.7 122 42.6
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 6.9e-09 64.3 128 39.1
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 6.9e-09 64.3 115 39.1
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 6.9e-09 64.3 117 41.9
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 9.0e-09 63.9 115 40.9
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 9.0e-09 63.9 117 35.9
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.2e-08 63.5 114 39.5
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 1.2e-08 63.5 127 40.2
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.5e-08 63.2 133 36.1
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.0e-08 62.8 129 37.2
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 2.6e-08 62.4 133 39.1
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.4e-08 62.0 134 37.3
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.4e-08 62.0 128 39.1
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 4.5e-08 61.6 120 37.5
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 5.8e-08 61.2 133 37.6
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 7.6e-08 60.8 121 36.4
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 7.6e-08 60.8 119 37.0
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 9.9e-08 60.5 118 37.3
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 9.9e-08 60.5 115 42.6
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 9.9e-08 60.5 132 38.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 1.3e-07 60.1 125 37.6
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.3e-07 60.1 129 38.0
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 1.3e-07 60.1 129 39.5
CDE02G3016 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.7e-07 59.7 61 44.3
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 1.7e-07 59.7 132 37.9
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 2.2e-07 59.3 129 35.7
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 2.9e-07 58.9 117 37.6
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.9e-07 58.9 126 37.3
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.9e-07 58.9 126 37.3
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 2.9e-07 58.9 128 38.3
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 2.9e-07 58.9 138 38.4
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 2.9e-07 58.9 133 38.3
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 3.8e-07 58.5 66 50.0
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 3.8e-07 58.5 118 39.8
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 3.8e-07 58.5 112 35.7
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 4.9e-07 58.2 124 38.7
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 4.9e-07 58.2 69 50.7
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 4.9e-07 58.2 128 37.5
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 4.9e-07 58.2 130 33.1
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 6.4e-07 57.8 132 34.8
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.4e-07 57.8 115 38.3
Gorai.009G178200 Gossypium raimondii HOM05D003074 ORTHO05D002434 6.4e-07 57.8 120 39.2
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 6.4e-07 57.8 79 45.6
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 6.4e-07 57.8 67 49.3
Sabra16G0289700 Salix brachista HOM05D003074 ORTHO05D002434 6.4e-07 57.8 115 37.4
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 8.4e-07 57.4 104 43.3
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 8.4e-07 57.4 126 38.1
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 8.4e-07 57.4 113 37.2
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.1e-06 57.0 137 36.5
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.4e-06 56.6 126 36.5
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 1.4e-06 56.6 111 37.8
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 1.4e-06 56.6 133 36.8
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.9e-06 56.2 120 33.3
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 1.9e-06 56.2 71 50.7
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 1.9e-06 56.2 134 35.8
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 1.9e-06 56.2 121 34.7
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 2.4e-06 55.8 68 44.1
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 3.2e-06 55.5 125 38.4
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 3.2e-06 55.5 129 36.4
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 3.2e-06 55.5 113 34.5
Sc17g0007340 Simmondsia chinensis HOM05D003074 ORTHO05D002434 3.2e-06 55.5 116 34.5
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 4.2e-06 55.1 139 33.8
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.2e-06 55.1 115 37.4
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 5.5e-06 54.7 125 34.4
AUR62012700 Chenopodium quinoa HOM05D003074 ORTHO05D002434 5.5e-06 54.7 118 34.7
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 5.5e-06 54.7 113 38.1
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 7.1e-06 54.3 116 37.1


User provided reference genes

Program Settings