Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 2.9e-307 1057.7 539 100.0
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 1.2e-231 806.6 541 77.4
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 2.0e-228 795.8 538 76.4
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 3.6e-225 785.0 540 75.9
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 6.2e-225 784.3 541 76.9
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 5.8e-223 777.7 537 75.2
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 2.2e-222 775.8 541 75.8
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 2.4e-221 772.3 544 75.0
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 7.0e-221 770.8 541 74.9
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 1.6e-220 769.6 543 74.6
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 5.0e-219 764.6 533 75.8
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 8.6e-219 763.8 541 73.8
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 2.1e-217 759.2 542 74.2
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 3.6e-217 758.4 534 74.5
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 6.2e-217 757.7 538 74.3
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 2.0e-215 752.7 540 72.8
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 4.4e-215 751.5 540 72.6
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 1.1e-213 746.9 538 72.7
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 3.2e-213 745.3 539 72.2
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 2.3e-211 739.2 539 71.8
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 5.1e-211 738.0 540 71.7
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 4.3e-210 734.9 543 71.5
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 6.2e-209 731.1 538 71.6
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 1.1e-208 730.3 558 70.3
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 3.1e-208 728.8 538 71.9
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 1.2e-207 726.9 537 71.9
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 4.4e-207 724.9 535 72.0
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 7.6e-207 724.2 534 72.7
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 2.9e-206 722.2 562 68.9
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 8.4e-206 720.7 537 71.7
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 4.2e-205 718.4 539 71.6
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 7.1e-205 717.6 542 71.6
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 2.7e-204 715.7 542 69.7
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 2.7e-204 715.7 537 70.8
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 7.8e-204 714.1 540 70.7
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 6.6e-203 711.1 533 70.5
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 4.3e-202 708.4 529 70.5
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 1.2e-201 706.8 531 70.1
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 2.1e-201 706.1 529 71.8
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 2.8e-201 705.7 510 73.3
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 8.1e-201 704.1 539 69.4
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 1.1e-200 703.7 535 69.7
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 1.4e-200 703.4 531 69.9
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 3.1e-200 702.2 528 71.2
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 4.0e-200 701.8 531 69.1
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 9.0e-200 700.7 500 72.6
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 2.6e-199 699.1 535 69.5
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 3.4e-199 698.7 535 69.3
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 5.8e-199 698.0 548 66.4
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 1.7e-198 696.4 502 73.3
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 2.4e-197 692.6 535 68.0
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 3.2e-197 692.2 485 74.0
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 1.2e-196 690.3 550 67.5
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 2.7e-196 689.1 533 68.5
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 3.5e-196 688.7 539 69.2
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 3.0e-195 685.6 511 69.1
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 1.6e-193 679.9 542 66.8
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 2.1e-193 679.5 530 68.5
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 3.6e-193 678.7 537 65.7
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 3.6e-193 678.7 508 70.3
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 3.4e-191 672.2 537 66.5
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 2.9e-190 669.1 481 72.1
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 8.4e-190 667.5 529 67.5
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 9.3e-189 664.1 453 76.6
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 1.6e-188 663.3 535 66.9
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 1.6e-188 663.3 535 66.9
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 3.0e-187 659.1 561 65.4
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 1.1e-186 657.1 535 66.5
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 5.6e-186 654.8 547 64.9
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 1.6e-185 653.3 479 70.4
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 6.2e-185 651.4 534 64.0
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 8.1e-185 651.0 597 61.1
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 1.4e-184 650.2 538 66.0
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 2.4e-184 649.4 466 71.7
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 2.0e-183 646.4 465 71.4
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 2.4e-176 622.9 540 61.7
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 1.5e-175 620.2 464 67.0
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 3.7e-169 599.0 540 61.9
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 1.1e-168 597.4 541 61.6
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.2e-166 589.7 486 63.6
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 9.4e-165 584.3 530 59.1
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 2.1e-164 583.2 416 71.2
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 7.9e-164 581.3 553 60.9
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 4.1e-160 568.9 541 58.2
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 2.3e-155 553.1 470 60.9
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 2.8e-153 546.2 448 62.9
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 2.4e-144 516.5 334 80.8
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 2.7e-135 486.5 370 70.8
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 4.0e-131 472.6 537 49.9
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 5.2e-131 472.2 506 50.8
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 5.4e-128 462.2 508 53.7
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 9.5e-125 451.4 476 51.1
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 3.5e-119 433.0 344 66.6
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 2.5e-117 426.8 495 47.7
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 1.5e-114 417.5 338 67.8
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 3.5e-111 406.4 325 67.1
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 1.4e-99 367.9 480 44.8
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 1.2e-92 344.7 258 69.4
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 1.1e-85 321.6 220 74.5
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 7.4e-69 265.8 210 62.4
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 7.4e-53 212.6 271 45.8
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 3.1e-51 207.2 106 95.3
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 1.0e-49 202.2 124 79.8
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 6.9e-43 179.5 116 76.7
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 5.5e-40 169.9 438 30.6
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 7.2e-32 142.9 133 59.4
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 5.2e-30 136.7 80 81.2
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 8.2e-28 129.4 90 66.7
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 3.1e-27 127.5 302 37.1
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 1.7e-25 121.7 302 36.1
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 1.7e-25 121.7 171 39.2
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.8e-22 111.7 109 51.4
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 7.7e-18 96.3 147 40.8
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 2.2e-17 94.7 63 74.6
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 6.5e-17 93.2 140 39.3
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 3.2e-16 90.9 151 40.4
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 4.2e-16 90.5 121 46.3
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 5.9e-10 70.1 69 56.5
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 2.3e-06 58.2 34 79.4
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 2.3e-06 58.2 161 31.7
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 2.3e-06 58.2 161 31.7


User provided reference genes

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