Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 0.0e+00 1229.5 630 100.0
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 2.9e-149 533.1 539 56.2
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 1.2e-147 527.7 549 56.3
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.8e-143 513.8 541 52.5
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 3.1e-143 513.1 547 53.9
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 1.1e-140 504.6 559 52.8
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.2e-139 501.1 547 52.8
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 7.9e-139 498.4 534 55.8
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.3e-138 497.7 554 52.3
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.3e-137 493.0 545 52.5
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 3.3e-137 493.0 580 51.7
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 8.2e-136 488.4 541 52.3
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 2.4e-135 486.9 543 51.0
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 5.3e-135 485.7 542 53.5
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 5.3e-135 485.7 544 52.6
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 5.3e-135 485.7 544 52.6
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 2.6e-134 483.4 580 49.3
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 3.2e-132 476.5 547 52.3
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 7.2e-132 475.3 547 51.6
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 3.0e-130 469.9 552 50.9
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 5.1e-130 469.2 543 51.6
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 5.7e-129 465.7 569 49.4
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 5.7e-129 465.7 541 50.6
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 1.3e-128 464.5 545 49.9
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 3.4e-126 456.4 560 49.8
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 8.5e-125 451.8 563 49.4
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 7.9e-123 445.3 541 50.3
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 1.4e-122 444.5 541 49.2
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 7.4e-121 438.7 544 48.3
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 1.3e-120 438.0 551 50.1
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 5.3e-119 432.6 548 49.5
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 7.7e-118 428.7 440 56.1
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 5.0e-117 426.0 551 48.6
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.9e-116 424.1 550 48.9
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 2.1e-115 420.6 550 48.4
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 3.6e-115 419.9 547 47.2
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.9e-115 418.7 571 46.4
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 1.5e-113 414.5 534 48.1
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 9.7e-113 411.8 549 47.5
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 2.8e-112 410.2 545 47.5
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 6.3e-112 409.1 550 48.0
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.4e-111 407.9 495 49.3
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 3.1e-111 406.8 537 48.2
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 2.6e-110 403.7 555 45.8
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.5e-110 402.9 535 47.3
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 1.0e-109 401.7 529 48.4
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.3e-109 401.4 555 46.1
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.5e-108 397.9 540 47.8
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.9e-108 397.5 555 46.8
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.5e-108 397.1 515 47.8
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 3.6e-107 393.3 557 47.0
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 1.4e-106 391.3 551 49.0
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 1.8e-106 391.0 555 47.0
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 3.0e-106 390.2 542 46.3
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 4.4e-105 386.3 528 47.2
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 7.5e-105 385.6 551 47.2
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 3.7e-104 383.3 561 44.4
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 8.2e-104 382.1 552 44.4
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 2.4e-103 380.6 548 46.9
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 4.1e-103 379.8 436 53.0
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 6.5e-101 372.5 530 47.0
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 3.6e-99 366.7 607 42.7
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 8.0e-99 365.5 560 44.1
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 2.6e-97 360.5 565 45.1
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 2.8e-96 357.1 561 45.3
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 7.0e-95 352.4 503 47.1
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 1.2e-94 351.7 548 43.8
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.0e-93 348.6 575 42.1
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 5.0e-93 346.3 527 46.5
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 2.5e-92 344.0 527 45.9
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 1.2e-91 341.7 515 44.7
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 6.1e-91 339.3 560 42.5
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 1.4e-90 338.2 557 42.2
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.4e-90 338.2 581 41.0
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 2.3e-90 337.4 580 41.9
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 3.0e-90 337.0 559 43.8
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 7.5e-89 332.4 523 44.0
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 1.1e-87 328.6 582 40.0
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 7.0e-87 325.9 524 41.2
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 5.9e-86 322.8 564 42.0
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 1.3e-85 321.6 508 42.1
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 2.9e-85 320.5 567 40.7
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 6.6e-85 319.3 562 40.4
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.5e-84 318.2 545 41.7
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.2e-83 315.1 546 42.1
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 2.0e-81 307.8 515 42.1
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.6e-81 307.4 548 41.8
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.7e-81 306.2 475 44.8
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 4.9e-80 303.1 535 41.7
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.0e-77 295.4 518 42.7
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 3.9e-77 293.5 546 42.5
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 5.0e-77 293.1 537 40.4
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.3e-76 290.0 559 41.7
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 2.8e-75 287.3 546 41.0
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.4e-74 285.0 568 39.4
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 3.1e-74 283.9 555 38.7
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 3.1e-74 283.9 459 42.9
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 9.8e-73 278.9 541 40.7
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 9.8e-73 278.9 541 40.7
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.3e-72 278.5 384 45.8
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 6.4e-72 276.2 563 40.7
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.1e-71 275.4 552 38.8
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 9.2e-71 272.3 452 40.9
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 9.2e-71 272.3 540 40.6
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 9.2e-71 272.3 551 39.9
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 2.0e-70 271.2 541 40.3
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 2.0e-70 271.2 546 39.9
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 3.5e-70 270.4 390 42.8
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 6.6e-69 266.2 537 39.3
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 1.9e-68 264.6 546 40.1
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.2e-67 261.9 609 36.9
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 2.8e-67 260.8 546 39.4
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 6.8e-66 256.1 594 35.9
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 2.4e-63 247.7 424 40.8
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.0e-61 242.3 425 41.9
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 3.3e-60 237.3 664 33.7
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 3.3e-60 237.3 435 40.0
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 1.4e-58 231.9 469 40.3
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 1.2e-57 228.8 560 38.2
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.6e-54 218.4 543 37.0
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.1e-51 208.0 162 66.0
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 4.4e-49 200.3 271 46.1
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 3.5e-46 190.7 144 68.1
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 4.8e-43 180.3 458 32.5
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 4.0e-42 177.2 249 49.0
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 3.9e-37 160.6 556 31.8
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 4.0e-34 150.6 549 31.5
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 8.1e-27 126.3 580 28.1
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 2.5e-23 114.8 429 31.7
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 1.6e-19 102.1 871 23.8
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 1.8e-18 98.6 127 46.5
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 6.5e-16 90.1 128 47.7
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 6.5e-16 90.1 113 50.4
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 2.5e-15 88.2 109 49.5
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 4.6e-14 84.0 81 54.3
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 6.9e-10 70.1 161 38.5
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 3.8e-08 64.3 110 36.4


User provided reference genes

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