Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 2.4e-54 215.3 112 100.0
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 3.0e-41 171.8 95 91.6
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 6.7e-41 170.6 95 92.6
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.9e-40 169.1 112 79.5
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.7e-40 166.8 95 89.5
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.3e-39 166.4 95 89.5
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.2e-39 163.7 112 77.7
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.2e-39 163.7 95 87.4
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.1e-38 163.3 95 88.4
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 1.1e-38 163.3 112 76.8
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 1.4e-38 162.9 112 77.7
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 1.8e-38 162.5 112 75.9
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.8e-38 162.5 112 75.9
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.8e-38 162.5 112 75.9
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.1e-38 161.8 92 89.1
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.1e-38 161.4 95 86.3
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 6.9e-38 160.6 112 75.9
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 9.1e-38 160.2 112 75.9
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 2.6e-37 158.7 95 85.3
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 2.6e-37 158.7 95 86.3
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 1.7e-36 156.0 112 72.3
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 1.7e-36 156.0 112 72.3
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 1.7e-36 156.0 95 86.3
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 2.2e-36 155.6 112 71.4
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 3.8e-36 154.8 93 82.8
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 5.0e-36 154.5 112 71.4
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 5.0e-36 154.5 112 71.4
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 5.0e-36 154.5 112 71.4
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 5.0e-36 154.5 112 71.4
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 5.0e-36 154.5 112 71.4
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 5.0e-36 154.5 112 71.4
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 5.0e-36 154.5 112 71.4
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 6.5e-36 154.1 112 71.4
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 6.5e-36 154.1 112 71.4
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 6.5e-36 154.1 112 71.4
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 8.5e-36 153.7 97 83.5
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 2.5e-35 152.1 112 70.5
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 2.5e-35 152.1 112 71.4
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 3.2e-35 151.8 95 81.1
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 4.2e-35 151.4 90 84.4
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 5.5e-35 151.0 95 80.0
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 7.2e-35 150.6 95 82.1
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 2.1e-34 149.1 93 81.7
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 2.1e-34 149.1 95 81.1
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 3.6e-34 148.3 92 80.4
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 3.6e-34 148.3 95 78.9
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 1.8e-33 146.0 95 80.0
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 3.0e-33 145.2 112 69.6
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 3.0e-33 145.2 95 78.9
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 3.0e-33 145.2 95 78.9
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.3e-31 139.8 82 85.4
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 2.2e-31 139.0 83 83.1
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.5e-28 127.1 70 90.0
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 8.5e-28 127.1 76 85.5
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 1.2e-26 123.2 93 71.0
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 1.6e-26 122.9 94 68.1
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 1.3e-23 113.2 82 67.1
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 1.7e-23 112.8 87 66.7
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.2e-23 112.5 85 69.4
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.8e-23 112.1 79 74.7
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 9.1e-22 107.1 82 67.1
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 9.4e-19 97.1 94 57.4
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 8.0e-18 94.0 90 58.9
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.0e-17 93.6 71 70.4
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 1.5e-16 89.7 60 73.3
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.8e-15 85.5 71 67.6
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 3.7e-15 85.1 81 59.3
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 3.1e-14 82.0 70 61.4
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 4.1e-14 81.6 53 77.4
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 1.6e-13 79.7 48 87.5
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-12 75.5 78 53.8
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.2e-11 71.6 112 45.5
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.4e-11 70.5 58 65.5
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.4e-11 70.5 111 45.0
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 1.2e-10 70.1 93 44.1
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 1.6e-10 69.7 58 60.3
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 1.6e-10 69.7 58 60.3
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 4.7e-10 68.2 51 70.6
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 6.1e-10 67.8 60 60.0
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 1.4e-09 66.6 41 75.6
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 5.2e-09 64.7 58 60.3
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 7.5e-08 60.8 39 71.8
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 7.5e-08 60.8 39 71.8
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 7.5e-08 60.8 39 71.8
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 9.8e-08 60.5 53 58.5
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 1.3e-07 60.1 58 53.4
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 2.8e-07 58.9 56 57.1
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 2.8e-07 58.9 41 70.7
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 5.4e-06 54.7 59 50.8
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 7.0e-06 54.3 58 50.0


User provided reference genes

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