Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03518 Eucalyptus grandis HOM05D004021 ORTHO05D003767 0.0e+00 1396.7 694 100.0
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 2.4e-72 277.7 742 33.7
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 7.8e-71 272.7 737 33.2
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 8.0e-68 262.7 703 33.7
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 1.4e-67 261.9 730 31.6
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 3.7e-65 253.8 747 31.5
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 4.9e-65 253.4 743 32.2
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 6.4e-65 253.1 729 32.2
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 2.7e-63 247.7 808 29.8
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 3.9e-62 243.8 724 31.5
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 2.5e-61 241.1 741 31.0
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 3.3e-61 240.7 739 32.1
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 1.2e-60 238.8 725 32.7
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 2.1e-60 238.0 713 31.8
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 3.6e-60 237.3 739 31.8
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.8e-59 235.0 715 32.0
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 2.0e-58 231.5 728 31.5
Gohir.D07G026600 Gossypium hirsutum HOM05D004021 ORTHO05D003767 3.4e-58 230.7 715 31.7
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.3e-57 228.8 712 32.0
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 5.4e-56 223.4 709 30.5
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 7.8e-55 219.5 723 30.0
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.1e-53 215.7 761 28.5
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 9.5e-53 212.6 723 30.2
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.4e-51 208.8 715 29.0
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 1.8e-51 208.4 714 29.0
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.8e-51 208.4 714 29.0
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 2.3e-51 208.0 771 30.1
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 5.2e-51 206.8 744 29.7
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.8e-51 206.5 719 29.2
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 3.7e-49 200.7 745 30.1
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 1.0e-46 192.6 739 29.8
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 2.9e-41 174.5 754 28.1
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 3.8e-41 174.1 679 28.3
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 1.4e-40 172.2 674 27.3
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 7.3e-37 159.8 583 28.1
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 9.6e-37 159.5 741 28.5
TAR626G0792 Trochodendron aralioides HOM05D004021 ORTHO05D003767 6.9e-35 153.3 553 29.7
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 2.6e-34 151.4 674 27.2
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 1.2e-31 142.5 583 29.8
MELO3C011152.2 Cucumis melo HOM05D004021 ORTHO05D003767 4.6e-31 140.6 622 27.7
CsaV3_2G030990 Cucumis sativus L. HOM05D004021 ORTHO05D003767 6.0e-31 140.2 621 27.9
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 1.0e-30 139.4 576 29.9
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 3.9e-30 137.5 587 29.8
ClCG08G012320 Citrullus lanatus HOM05D004021 ORTHO05D003767 5.6e-29 133.7 622 27.3
Sed0002796 Sechium edule HOM05D004021 ORTHO05D003767 1.6e-28 132.1 691 27.8
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 2.1e-28 131.7 725 27.3
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 1.4e-27 129.0 588 29.6
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 1.4e-27 129.0 739 26.9
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.8e-27 128.6 633 27.0
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 4.0e-27 127.5 587 28.4
Dinv38014 Davidia involucrata HOM05D004021 ORTHO05D003767 9.0e-27 126.3 671 26.8
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 9.0e-27 126.3 579 27.8
ClCG11G015210 Citrullus lanatus HOM05D004021 ORTHO05D003767 1.2e-26 125.9 720 25.8
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 5.8e-26 123.6 613 26.4
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 9.9e-26 122.9 556 30.4
Cpa.g.sc7.256 Carica papaya HOM05D004021 ORTHO05D003767 1.7e-25 122.1 345 31.6
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 3.8e-25 120.9 613 26.8
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 4.9e-25 120.6 771 25.3
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 2.1e-23 115.2 765 24.8
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 6.0e-23 113.6 527 28.1
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 1.0e-22 112.8 570 28.6
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 1.3e-22 112.5 582 26.6
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 2.3e-22 111.7 556 29.5
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 6.7e-22 110.2 514 26.8
Rhsim08G0224000 Rhododendron simsii HOM05D004021 ORTHO05D003767 6.7e-22 110.2 511 27.8
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 3.3e-21 107.8 439 28.0
FAN09G3084 Fragaria x ananassa HOM05D004021 ORTHO05D003767 4.8e-20 104.0 309 30.7
FAN13G2039 Fragaria x ananassa HOM05D004021 ORTHO05D003767 4.8e-20 104.0 309 30.7
FAN20G1338 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.1e-19 102.8 309 30.7
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 1.4e-19 102.4 587 27.1
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 4.0e-19 100.9 555 26.5
FAN20G0872 Fragaria x ananassa HOM05D004021 ORTHO05D003767 5.3e-19 100.5 289 30.8
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 5.3e-19 100.5 552 26.6
FAN02G4319 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.9e-19 100.1 309 30.4
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 2.6e-18 98.2 732 25.7
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 3.4e-18 97.8 567 26.5
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 7.6e-18 96.7 716 25.4
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.3e-17 95.9 707 25.0
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.7e-17 95.5 704 24.3
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 4.9e-17 94.0 698 25.2
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.4e-16 92.4 595 25.4
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 1.9e-16 92.0 533 26.1
vmacro05366 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 2.5e-16 91.7 720 24.4
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 7.1e-16 90.1 244 34.8
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 4.6e-15 87.4 484 28.3
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 7.9e-15 86.7 534 27.2
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 1.0e-14 86.3 576 24.1
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 3.9e-14 84.3 501 25.0
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 6.7e-14 83.6 545 25.7
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 8.7e-14 83.2 565 26.5
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 4.3e-13 80.9 502 25.9
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 5.6e-13 80.5 703 23.2
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 5.6e-13 80.5 577 23.9
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 4.8e-12 77.4 575 26.3
Dinv30474 Davidia involucrata HOM05D004021 ORTHO05D003767 8.2e-12 76.6 757 23.1
Lalb_Chr22g0352251 Lupinus albus HOM05D004021 ORTHO05D003767 3.1e-11 74.7 478 25.5
Atru.chr7.2138 Acer truncatum HOM05D004021 ORTHO05D003767 6.9e-11 73.6 96 38.5
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 2.0e-10 72.0 568 23.1
Lj8P589T23 Lonicera japonica HOM05D004021 ORTHO05D003767 7.6e-10 70.1 554 26.7
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 1.3e-09 69.3 497 25.6
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 1.3e-09 69.3 697 22.5
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.3e-09 69.3 636 23.1
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 1.7e-09 68.9 495 26.3
Atru.chr7.2139 Acer truncatum HOM05D004021 ORTHO05D003767 2.2e-09 68.6 259 30.1
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 6.5e-09 67.0 564 24.5
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 1.4e-08 65.9 496 24.8
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.4e-08 65.9 679 22.8
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 2.5e-08 65.1 508 25.4
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 1.2e-07 62.8 509 25.1
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 2.1e-07 62.0 577 23.7
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 2.1e-07 62.0 577 23.7
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 2.1e-07 62.0 577 23.7
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.1e-07 62.0 660 22.4
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 2.1e-07 62.0 663 23.7
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 2.7e-07 61.6 538 23.8
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 4.6e-07 60.8 518 25.7
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 7.9e-07 60.1 700 22.3
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 1.3e-06 59.3 507 24.3
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 1.8e-06 58.9 503 23.5
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.8e-06 58.9 660 22.7
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.8e-06 58.9 583 22.6
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 3.9e-06 57.8 677 24.1
Aqoxy7G01578 Aquilegia oxysepala HOM05D065736 ORTHO05D038511 8.7e-06 56.6 290 26.2


User provided reference genes

Program Settings