Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03516 Eucalyptus grandis HOM05D005125 ORTHO05D006777 1.5e-231 805.8 401 100.0
Eucgr.L00923 Eucalyptus grandis HOM05D005125 ORTHO05D006777 6.6e-216 753.8 438 88.6
PGR083G1107 Punica granatum HOM05D005125 ORTHO05D006777 4.7e-161 571.6 435 68.0
GSVIVG01013360001 Vitis vinifera HOM05D005125 ORTHO05D006777 6.3e-158 561.2 409 68.7
QL02p014036 Quercus lobata HOM05D005125 ORTHO05D006777 5.9e-156 554.7 425 67.1
Cfa014076 Carpinus fangiana HOM05D005125 ORTHO05D006777 2.2e-155 552.7 442 66.1
Cpa.g.sc26.198 Carica papaya HOM05D005125 ORTHO05D006777 1.6e-153 546.6 424 66.7
CiPaw.07G138900 Carya illinoinensis HOM05D005125 ORTHO05D006777 1.0e-152 543.9 441 64.9
Prupe.1G354500 Prunus persica HOM05D005125 ORTHO05D006777 1.8e-152 543.1 413 66.8
Haze_22773 Corylus avellana HOM05D005125 ORTHO05D006777 2.3e-152 542.7 386 71.0
MD08G1002400 Malus domestica HOM05D005125 ORTHO05D006777 8.8e-152 540.8 435 64.6
Sabra05G0193900 Salix brachista HOM05D005125 ORTHO05D006777 1.5e-151 540.0 423 65.5
MD15G1002000 Malus domestica HOM05D005125 ORTHO05D006777 2.0e-151 539.7 442 64.9
CiPaw.08G073000 Carya illinoinensis HOM05D005125 ORTHO05D006777 2.6e-151 539.3 432 64.6
FvH4_2g37450 Fragaria vesca HOM05D005125 ORTHO05D006777 9.8e-151 537.3 437 64.3
RcHm_v2.0_Chr6g0304271 Rosa chinensis HOM05D005125 ORTHO05D006777 2.2e-150 536.2 437 65.0
TWI56G0714 Tripterygium wilfordii HOM05D005125 ORTHO05D006777 2.2e-150 536.2 432 65.7
Potri.005G250300 Populus trichocarpa HOM05D005125 ORTHO05D006777 2.8e-150 535.8 423 65.2
CSS0022218 Camellia sinensis var. sinensis HOM05D005125 ORTHO05D006777 3.7e-150 535.4 430 65.1
Dinv31939 Davidia involucrata HOM05D005125 ORTHO05D006777 3.7e-150 535.4 432 64.6
Manes.05G134400 Manihot esculenta HOM05D005125 ORTHO05D006777 4.8e-150 535.0 421 66.0
Potri.002G010800 Populus trichocarpa HOM05D005125 ORTHO05D006777 4.8e-150 535.0 400 68.0
Hma1.2p1_0507F.1_g168460 Hydrangea macrophylla HOM05D005125 ORTHO05D006777 6.3e-150 534.6 429 66.0
FAN27G2626 Fragaria x ananassa HOM05D005125 ORTHO05D006777 1.1e-149 533.9 431 64.0
Ciclev10003241m.g Citrus clementina HOM05D005125 ORTHO05D006777 1.4e-149 533.5 425 65.4
FAN15G0126 Fragaria x ananassa HOM05D005125 ORTHO05D006777 4.1e-149 531.9 445 62.5
Ca_15433_v3 Cicer arietinum L. HOM05D005125 ORTHO05D006777 7.0e-149 531.2 425 64.7
Lalb_Chr23g0265791 Lupinus albus HOM05D005125 ORTHO05D006777 7.0e-149 531.2 398 68.6
ClCG08G009440 Citrullus lanatus HOM05D005125 ORTHO05D006777 1.6e-148 530.0 414 66.7
Duzib116G0840 Durio zibethinus HOM05D005125 ORTHO05D006777 1.6e-148 530.0 408 66.4
Glyma.04G017900 Glycine max HOM05D005125 ORTHO05D006777 2.7e-148 529.3 404 66.1
THA.LOC104813172 Tarenaya hassleriana HOM05D005125 ORTHO05D006777 3.5e-148 528.9 421 64.6
FAN20G1306 Fragaria x ananassa HOM05D005125 ORTHO05D006777 1.0e-147 527.3 431 63.6
Duzib093G0577 Durio zibethinus HOM05D005125 ORTHO05D006777 1.7e-147 526.6 429 64.3
TAR625G0173 Trochodendron aralioides HOM05D005125 ORTHO05D006777 5.0e-147 525.0 406 65.5
Manes.18G005400 Manihot esculenta HOM05D005125 ORTHO05D006777 4.2e-146 521.9 399 66.7
Actinidia37922 Actinidia chinensis HOM05D005125 ORTHO05D006777 1.6e-145 520.0 426 64.8
Medtr3g115290 Medicago truncatula HOM05D005125 ORTHO05D006777 2.7e-145 519.2 432 63.0
Thecc.08G058900 Theobroma cacao HOM05D005125 ORTHO05D006777 2.7e-145 519.2 432 63.2
CANSAT25G1708 Cannabis sativa HOM05D005125 ORTHO05D006777 3.6e-145 518.8 402 66.4
Lalb_Chr11g0061631 Lupinus albus HOM05D005125 ORTHO05D006777 6.1e-145 518.1 433 64.0
EL10Ac1g01960 Beta vulgaris HOM05D005125 ORTHO05D006777 1.0e-144 517.3 396 66.2
CsaV3_6G031580 Cucumis sativus L. HOM05D005125 ORTHO05D006777 1.0e-144 517.3 426 64.1
Gohir.A01G105600 Gossypium hirsutum HOM05D005125 ORTHO05D006777 1.4e-144 516.9 429 62.7
Atru.chr13.135 Acer truncatum HOM05D005125 ORTHO05D006777 1.8e-144 516.5 393 67.4
Glyma.06G018200 Glycine max HOM05D005125 ORTHO05D006777 2.3e-144 516.2 428 63.1
Gorai.002G117000 Gossypium raimondii HOM05D005125 ORTHO05D006777 2.3e-144 516.2 429 62.7
Solyc04g082340.3 Solanum lycopersicum HOM05D005125 ORTHO05D006777 3.0e-144 515.8 420 63.1
Peaxi162Scf00893g00037 Petunia axillaris HOM05D005125 ORTHO05D006777 5.2e-144 515.0 412 64.3
Cc10_g00670 Coffea canephora HOM05D005125 ORTHO05D006777 6.8e-144 514.6 424 62.5
Gohir.D01G091900 Gossypium hirsutum HOM05D005125 ORTHO05D006777 6.8e-144 514.6 429 62.5
Lj1g0005535 Lotus japonicus HOM05D005125 ORTHO05D006777 8.8e-144 514.2 430 64.2
Nitab4.5_0000588g0110 Nicotiana tabacum HOM05D005125 ORTHO05D006777 1.2e-143 513.8 414 64.0
Sopen04g035960 Solanum pennellii HOM05D005125 ORTHO05D006777 2.6e-143 512.7 427 62.5
BcaC04g22006 Brassica carinata HOM05D005125 ORTHO05D006777 4.4e-143 511.9 436 60.3
C09p24930 Brassica napus HOM05D005125 ORTHO05D006777 4.4e-143 511.9 436 60.3
arahy.Tifrunner.gnm1.ann1.1X7ZBM Arachis hypogaea HOM05D005125 ORTHO05D006777 9.8e-143 510.8 411 64.2
arahy.Tifrunner.gnm1.ann1.VXG7Z6 Arachis hypogaea HOM05D005125 ORTHO05D006777 1.7e-142 510.0 411 64.2
Rhsim06G0007400 Rhododendron simsii HOM05D005125 ORTHO05D006777 3.7e-142 508.8 424 63.4
A09p19570 Brassica napus HOM05D005125 ORTHO05D006777 6.3e-142 508.1 434 60.1
BraA09t37570Z Brassica rapa HOM05D005125 ORTHO05D006777 1.1e-141 507.3 434 60.1
Ah.00g000800 Amaranthus hybridus HOM05D005125 ORTHO05D006777 1.8e-141 506.5 438 61.4
AL8G19280 Arabidopsis lyrata HOM05D005125 ORTHO05D006777 2.4e-141 506.1 421 61.3
Carub.0008s0686 Capsella rubella HOM05D005125 ORTHO05D006777 2.4e-141 506.1 420 61.9
Aqoxy6G01728 Aquilegia oxysepala HOM05D005125 ORTHO05D006777 4.1e-141 505.4 399 64.7
BcaB07g31085 Brassica carinata HOM05D005125 ORTHO05D006777 9.2e-141 504.2 429 60.6
PGSC0003DMG400009979 Solanum tuberosum HOM05D005125 ORTHO05D006777 9.2e-141 504.2 398 63.8
CARHR284930 Cardamine hirsuta HOM05D005125 ORTHO05D006777 2.7e-140 502.7 422 60.4
TPR.G38202 Trifolium pratense HOM05D005125 ORTHO05D006777 5.9e-140 501.5 425 61.2
AT5G42320 Arabidopsis thaliana HOM05D005125 ORTHO05D006777 7.7e-140 501.1 424 60.6
Aa31LG9G12440 Aethionema arabicum HOM05D005125 ORTHO05D006777 1.7e-139 500.0 430 60.0
Migut.C00961 Erythranthe guttata HOM05D005125 ORTHO05D006777 2.3e-139 499.6 437 60.2
Lj4A11T69 Lonicera japonica HOM05D005125 ORTHO05D006777 5.0e-139 498.4 401 64.6
Sp7g08250 Schrenkiella parvula HOM05D005125 ORTHO05D006777 8.6e-139 497.7 432 59.3
Phvul.009G010800 Phaseolus vulgaris HOM05D005125 ORTHO05D006777 1.1e-138 497.3 398 64.6
AUR62036871 Chenopodium quinoa HOM05D005125 ORTHO05D006777 1.5e-138 496.9 391 63.4
EL10Ac7g16836 Beta vulgaris HOM05D005125 ORTHO05D006777 2.5e-138 496.1 382 65.7
PSO541G3228 Papaver somniferum HOM05D005125 ORTHO05D006777 4.7e-137 491.9 414 63.5
PSO675G8084 Papaver somniferum HOM05D005125 ORTHO05D006777 1.0e-136 490.7 414 63.0
MD12G1003300 Malus domestica HOM05D005125 ORTHO05D006777 1.8e-136 490.0 482 56.6
CAN.G311.115 Capsicum annuum HOM05D005125 ORTHO05D006777 4.0e-136 488.8 383 64.5
Sed0024407 Sechium edule HOM05D005125 ORTHO05D006777 5.2e-136 488.4 379 67.0
vmacro21811 Vaccinium macrocarpon HOM05D005125 ORTHO05D006777 1.5e-135 486.9 416 61.5
Lsat_1_v5_gn_2_5181 Lactuca sativa HOM05D005125 ORTHO05D006777 3.4e-135 485.7 428 59.6
SalBow7G1095 Salvia bowleyana HOM05D005125 ORTHO05D006777 7.5e-135 484.6 442 58.4
Rhsim07G0254900 Rhododendron simsii HOM05D005125 ORTHO05D006777 2.9e-134 482.6 387 64.6
HanXRQChr06g0183991 Helianthus annuus HOM05D005125 ORTHO05D006777 3.2e-133 479.2 431 59.2
Actinidia28601 Actinidia chinensis HOM05D005125 ORTHO05D006777 1.6e-132 476.9 408 62.3
Duzib041G0467 Durio zibethinus HOM05D005125 ORTHO05D006777 1.6e-132 476.9 408 60.5
vmacro04403 Vaccinium macrocarpon HOM05D005125 ORTHO05D006777 5.0e-131 471.9 421 59.9
ECA238G0848 Erigeron canadensis HOM05D005125 ORTHO05D006777 1.9e-130 469.9 387 62.8
SGA_v2.0_scaffold108G30863 Striga asiatica HOM05D005125 ORTHO05D006777 1.6e-129 466.8 461 55.5
Lsat_1_v5_gn_8_26201 Lactuca sativa HOM05D005125 ORTHO05D006777 1.0e-128 464.2 401 59.4
Hund05112 Selenicereus undatus HOM05D005125 ORTHO05D006777 4.0e-128 462.2 379 62.8
Ca_15458_v3 Cicer arietinum L. HOM05D005125 ORTHO05D006777 4.3e-122 442.2 338 65.7
Nn5g30942 Nelumbo nucifera HOM05D005125 ORTHO05D006777 4.7e-121 438.7 374 61.2
unitig_747.g21516 Utricularia gibba HOM05D005125 ORTHO05D006777 8.1e-121 438.0 420 53.1
MBI08_g41521_MAGBIO Magnolia biondii HOM05D005125 ORTHO05D006777 1.8e-120 436.8 400 58.5
VMungo1309G1587 Vigna mungo HOM05D005125 ORTHO05D006777 2.0e-119 433.3 351 63.2
HPP92_007117 Vanilla planifolia HOM05D005125 ORTHO05D006777 3.5e-116 422.5 386 58.0
Thhalv10027780m.g Eutrema salsugineum HOM05D005125 ORTHO05D006777 1.3e-115 420.6 333 64.0
MELO3C026539.2 Cucumis melo HOM05D005125 ORTHO05D006777 6.2e-113 411.8 347 62.0
DCAR_016769 Daucus carota HOM05D005125 ORTHO05D006777 8.1e-113 411.4 383 55.9
Os02g0119300 Oryza sativa ssp. japonica HOM05D005125 ORTHO05D006777 1.4e-112 410.6 398 54.3
Zm00001eb209310 Zea mays HOM05D005125 ORTHO05D006777 2.0e-111 406.8 415 55.2
ATR0661G305 Amborella trichopoda HOM05D005125 ORTHO05D006777 9.2e-109 397.9 418 52.2
Sc15g0004430 Simmondsia chinensis HOM05D005125 ORTHO05D006777 1.5e-106 390.6 332 62.3
SHI07997 Sapria himalayana HOM05D005125 ORTHO05D006777 2.4e-104 383.3 426 51.4
CDE05G1644 Ceratophyllum demersum HOM05D005125 ORTHO05D006777 8.9e-104 381.3 388 54.1
CSS0019336 Camellia sinensis var. sinensis HOM05D005125 ORTHO05D006777 7.6e-103 378.3 302 64.6
Gorai.009G188100 Gossypium raimondii HOM05D005125 ORTHO05D006777 2.9e-102 376.3 311 59.8
Gohir.D05G182800 Gossypium hirsutum HOM05D005125 ORTHO05D006777 7.1e-101 371.7 311 58.8
Gohir.A05G179600 Gossypium hirsutum HOM05D005125 ORTHO05D006777 2.1e-100 370.2 311 58.8
Dinv05534 Davidia involucrata HOM05D005125 ORTHO05D006777 1.0e-91 341.3 229 73.4
COL.COLO4_06662 Corchorus olitorius HOM05D005125 ORTHO05D006777 1.3e-86 324.3 283 61.5
Psat5g159120 Pisum sativum HOM05D005125 ORTHO05D006777 1.2e-84 317.8 198 75.8
AagrBONN_evm.TU.Sc2ySwM_362.2863 Anthoceros agrestis HOM05D005125 ORTHO05D006777 2.1e-81 307.0 329 49.2
BcaNung05255 Brassica carinata HOM05D005125 ORTHO05D006777 1.3e-78 297.7 243 62.6
Mapoly0045s0063 Marchantia polymorpha HOM05D005125 ORTHO05D006777 8.4e-78 295.0 323 47.4
Pp3c20_16570 Physcomitrium patens HOM05D005125 ORTHO05D006777 1.3e-70 271.2 406 39.2
SMO358G0159 Selaginella moellendorffii HOM05D005125 ORTHO05D006777 3.2e-69 266.5 277 50.5
SEGI_03459 Sequoiadendron giganteum HOM05D005125 ORTHO05D006777 1.3e-67 261.2 198 63.1
ECA238G3411 Erigeron canadensis HOM05D005125 ORTHO05D006777 6.9e-64 248.8 208 60.1
Cre11.g467631 Chlamydomonas reinhardtii HOM05D005125 ORTHO05D006777 2.0e-58 230.7 332 39.8
Oeu056206.2 Olea europaea HOM05D005125 ORTHO05D006777 5.7e-58 229.2 145 74.5
BcaNung05254 Brassica carinata HOM05D005125 ORTHO05D006777 3.6e-52 209.9 150 66.7
BolC9t55384H Brassica oleracea HOM05D005125 ORTHO05D006777 2.0e-50 204.1 179 59.2
SGA_v2.0_scaffold195G40773 Striga asiatica HOM05D005125 ORTHO05D006777 1.7e-49 201.1 152 67.8
MD00G1076900 Malus domestica HOM05D005125 ORTHO05D006777 1.8e-48 197.6 186 57.0
PRCOL_00006814 Prasinoderma coloniale HOM05D005125 ORTHO05D006777 3.5e-47 193.4 228 46.5
SGA_v2.0_scaffold83G26467 Striga asiatica HOM05D005125 ORTHO05D006777 3.6e-36 156.8 245 40.4
Cc00_g07920 Coffea canephora HOM05D005125 ORTHO05D006777 3.5e-31 140.2 156 53.8
Sc15g0004440 Simmondsia chinensis HOM05D005125 ORTHO05D006777 1.1e-29 135.2 122 60.7
ECA233G3085 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.6e-22 109.0 76 63.2
Oeu035185.1 Olea europaea HOM05D005125 ORTHO05D006777 1.6e-20 104.8 94 60.6
SEGI_37631 Sequoiadendron giganteum HOM05D005125 ORTHO05D006777 3.4e-18 97.1 63 65.1
Cre16.g668950 Chlamydomonas reinhardtii HOM05D005125 ORTHO05D034490 4.1e-16 90.1 254 30.7
PRCOL_00005708 Prasinoderma coloniale HOM05D005125 ORTHO05D034490 1.2e-15 88.6 324 27.8
TPR.G33884 Trifolium pratense HOM05D005125 ORTHO05D006777 1.6e-15 88.2 54 68.5
Cc10_g14360 Coffea canephora HOM05D005125 ORTHO05D006777 1.3e-14 85.1 58 67.2
MCO16G405 Micromonas commoda HOM05D005125 ORTHO05D006777 1.3e-14 85.1 140 36.4
ECA233G5321 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.1e-12 77.8 74 52.7
Lsat_1_v5_gn_1_87521 Lactuca sativa HOM05D005125 ORTHO05D007904 1.4e-11 75.1 42 76.2
ECA238G2450 Erigeron canadensis HOM05D000240 ORTHO05D002721 9.2e-08 62.4 147 32.0


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