Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03510 Eucalyptus grandis HOM05D000744 ORTHO05D000332 3.6e-49 198.0 102 100.0
Eucgr.C01589 Eucalyptus grandis HOM05D000744 ORTHO05D000332 2.4e-37 158.7 83 97.6
Duzib187G1276 Durio zibethinus HOM05D000744 ORTHO05D000332 6.1e-33 144.1 93 80.6
CSS0007423 Camellia sinensis var. sinensis HOM05D000744 ORTHO05D000332 9.8e-31 136.7 103 69.9
QL12p029556 Quercus lobata HOM05D000744 ORTHO05D000332 5.4e-29 131.0 104 70.2
arahy.Tifrunner.gnm1.ann1.QP6ZFN Arachis hypogaea HOM05D000744 ORTHO05D000332 2.0e-28 129.0 102 67.6
Ciclev10007656m.g Citrus clementina HOM05D000744 ORTHO05D000332 3.5e-28 128.3 95 74.7
arahy.Tifrunner.gnm1.ann1.9KTC61 Arachis hypogaea HOM05D000744 ORTHO05D000332 5.9e-28 127.5 101 67.3
GSVIVG01035657001 Vitis vinifera HOM05D000744 ORTHO05D000332 5.9e-28 127.5 105 66.7
Duzib168G2268 Durio zibethinus HOM05D000744 ORTHO05D000332 1.0e-27 126.7 80 83.8
Actinidia15733 Actinidia chinensis HOM05D000744 ORTHO05D000332 2.3e-27 125.6 112 64.3
arahy.Tifrunner.gnm1.ann1.W3VFTF Arachis hypogaea HOM05D000744 ORTHO05D000332 3.8e-27 124.8 103 68.9
Lalb_Chr23g0269521 Lupinus albus HOM05D000744 ORTHO05D000332 5.0e-27 124.4 103 68.9
arahy.Tifrunner.gnm1.ann1.46S9P8 Arachis hypogaea HOM05D000744 ORTHO05D000332 6.5e-27 124.0 103 68.0
COL.COLO4_18683 Corchorus olitorius HOM05D000744 ORTHO05D000332 6.5e-27 124.0 110 63.6
Gohir.A07G023300 Gossypium hirsutum HOM05D000744 ORTHO05D000332 3.3e-26 121.7 77 83.1
Gohir.D07G026900 Gossypium hirsutum HOM05D000744 ORTHO05D000332 3.3e-26 121.7 77 83.1
Gorai.001G027900 Gossypium raimondii HOM05D000744 ORTHO05D000332 3.3e-26 121.7 77 83.1
Lalb_Chr08g0243211 Lupinus albus HOM05D000744 ORTHO05D000332 4.2e-26 121.3 103 68.0
Duzib150G0276 Durio zibethinus HOM05D000744 ORTHO05D000332 7.2e-26 120.6 84 76.2
Thecc.09G041300 Theobroma cacao HOM05D000744 ORTHO05D000332 7.2e-26 120.6 79 78.5
Sabra06G0188400 Salix brachista HOM05D000744 ORTHO05D000332 9.5e-26 120.2 84 77.4
Potri.006G241000 Populus trichocarpa HOM05D000744 ORTHO05D000332 1.2e-25 119.8 83 78.3
AUR62009313 Chenopodium quinoa HOM05D000744 ORTHO05D000332 2.8e-25 118.6 105 63.8
AUR62029666 Chenopodium quinoa HOM05D000744 ORTHO05D000332 2.8e-25 118.6 105 63.8
AUR62041726 Chenopodium quinoa HOM05D000744 ORTHO05D000332 2.8e-25 118.6 105 63.8
AUR62043616 Chenopodium quinoa HOM05D000744 ORTHO05D000332 2.8e-25 118.6 105 63.8
CANSAT25G0045 Cannabis sativa HOM05D000744 ORTHO05D000332 1.0e-24 116.7 117 61.5
Hund19533 Selenicereus undatus HOM05D000744 ORTHO05D000332 1.0e-24 116.7 101 64.4
Glyma.06G082800 Glycine max HOM05D000744 ORTHO05D000332 1.4e-24 116.3 103 65.0
Medtr1g026840 Medicago truncatula HOM05D000744 ORTHO05D000332 1.8e-24 115.9 104 65.4
Medtr3g110108 Medicago truncatula HOM05D000744 ORTHO05D000332 1.8e-24 115.9 99 64.6
TAR626G0846 Trochodendron aralioides HOM05D000744 ORTHO05D000332 1.8e-24 115.9 82 76.8
CiPaw.07G206100 Carya illinoinensis HOM05D000744 ORTHO05D000332 2.3e-24 115.5 76 84.2
CiPaw.08G024300 Carya illinoinensis HOM05D000744 ORTHO05D000332 2.3e-24 115.5 83 75.9
VMungo0647G2303 Vigna mungo HOM05D000744 ORTHO05D000332 3.0e-24 115.2 103 66.0
PGR031G2136 Punica granatum HOM05D000744 ORTHO05D000332 4.0e-24 114.8 86 79.1
Haze_21869 Corylus avellana HOM05D000744 ORTHO05D000332 8.9e-24 113.6 79 81.0
Glyma.04G081100 Glycine max HOM05D000744 ORTHO05D000332 1.2e-23 113.2 103 64.1
Glyma.14G142900 Glycine max HOM05D000744 ORTHO05D000332 1.2e-23 113.2 110 61.8
Psat5g022600 Pisum sativum HOM05D000744 ORTHO05D000332 2.0e-23 112.5 96 62.5
Ca_12733_v3 Cicer arietinum L. HOM05D000744 ORTHO05D000332 2.6e-23 112.1 104 65.4
Ca_12739_v3 Cicer arietinum L. HOM05D000744 ORTHO05D000332 2.6e-23 112.1 104 65.4
TWI63G0783 Tripterygium wilfordii HOM05D000744 ORTHO05D000332 3.4e-23 111.7 86 70.9
TAR636G3538 Trochodendron aralioides HOM05D000744 ORTHO05D000332 3.4e-23 111.7 84 72.6
Phvul.001G063400 Phaseolus vulgaris HOM05D000744 ORTHO05D000332 4.4e-23 111.3 103 64.1
Lalb_Chr11g0064421 Lupinus albus HOM05D000744 ORTHO05D000332 5.7e-23 110.9 103 62.1
Manes.16G071200 Manihot esculenta HOM05D000744 ORTHO05D000332 7.5e-23 110.5 77 75.3
Oeu008292.1 Olea europaea HOM05D000744 ORTHO05D000332 9.8e-23 110.2 108 61.1
Oeu008293.1 Olea europaea HOM05D000744 ORTHO05D000332 9.8e-23 110.2 108 61.1
Solyc08g068370.3 Solanum lycopersicum HOM05D000744 ORTHO05D000332 1.3e-22 109.8 88 69.3
Sopen08g022210 Solanum pennellii HOM05D000744 ORTHO05D000332 1.3e-22 109.8 88 69.3
CSS0031519 Camellia sinensis var. sinensis HOM05D000744 ORTHO05D000332 1.7e-22 109.4 127 55.1
Peaxi162Scf00276g00311 Petunia axillaris HOM05D000744 ORTHO05D000332 1.7e-22 109.4 103 59.2
CAN.G21.35 Capsicum annuum HOM05D000744 ORTHO05D000332 2.8e-22 108.6 88 69.3
MELO3C011154.2 Cucumis melo HOM05D000744 ORTHO05D000332 3.7e-22 108.2 107 65.4
Dinv30264 Davidia involucrata HOM05D000744 ORTHO05D000332 3.7e-22 108.2 83 71.1
Sabra18G0039200 Salix brachista HOM05D000744 ORTHO05D000332 3.7e-22 108.2 79 74.7
Ca_15612_v3 Cicer arietinum L. HOM05D000744 ORTHO05D000332 4.9e-22 107.8 105 62.9
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 4.9e-22 107.8 112 57.1
Cpa.g.sc78.69 Carica papaya HOM05D000744 ORTHO05D000332 6.3e-22 107.5 81 72.8
CsaV3_2G031010 Cucumis sativus L. HOM05D000744 ORTHO05D000332 8.3e-22 107.1 107 64.5
Psat0s1315g0040 Pisum sativum HOM05D000744 ORTHO05D000332 8.3e-22 107.1 107 60.7
Potri.018G039100 Populus trichocarpa HOM05D000744 ORTHO05D000332 8.3e-22 107.1 80 72.5
TAR383G0445 Trochodendron aralioides HOM05D000744 ORTHO05D000332 8.3e-22 107.1 81 74.1
Sed0027395 Sechium edule HOM05D000744 ORTHO05D000332 1.1e-21 106.7 109 63.3
Gohir.A06G094800 Gossypium hirsutum HOM05D000744 ORTHO05D000332 1.4e-21 106.3 94 66.0
ClCG08G012340 Citrullus lanatus HOM05D000744 ORTHO05D000332 3.1e-21 105.1 107 63.6
Gohir.D06G094300 Gossypium hirsutum HOM05D000744 ORTHO05D000332 4.1e-21 104.8 86 68.6
Gorai.010G108800 Gossypium raimondii HOM05D000744 ORTHO05D000332 4.1e-21 104.8 86 68.6
Dinv14239 Davidia involucrata HOM05D000744 ORTHO05D000332 5.4e-21 104.4 82 70.7
Nitab4.5_0005839g0010 Nicotiana tabacum HOM05D000744 ORTHO05D000332 9.2e-21 103.6 83 69.9
TWI32G0640 Tripterygium wilfordii HOM05D000744 ORTHO05D000332 2.7e-20 102.1 74 71.6
Prupe.1G451300 Prunus persica HOM05D000744 ORTHO05D000332 3.5e-20 101.7 138 48.6
SGA_v2.0_scaffold243G44292 Striga asiatica HOM05D000744 ORTHO05D000332 3.5e-20 101.7 109 56.9
Nitab4.5_0000052g0230 Nicotiana tabacum HOM05D000744 ORTHO05D000332 5.9e-20 100.9 81 70.4
PGSC0003DMG400032056 Solanum tuberosum HOM05D000744 ORTHO05D000332 1.7e-19 99.4 82 68.3
TWI34G1595 Tripterygium wilfordii HOM05D000744 ORTHO05D000332 2.3e-19 99.0 83 69.9
Nn3g18084 Nelumbo nucifera HOM05D000744 ORTHO05D000332 2.9e-19 98.6 81 70.4
Manes.03G061600 Manihot esculenta HOM05D000744 ORTHO05D000332 5.0e-19 97.8 78 71.8
Peaxi162Scf01578g00018 Petunia axillaris HOM05D000744 ORTHO05D000332 6.6e-19 97.4 80 68.8
CsaV3_3G048660 Cucumis sativus L. HOM05D000744 ORTHO05D000332 8.6e-19 97.1 94 59.6
SGA_v2.0_scaffold163G38082 Striga asiatica HOM05D000744 ORTHO05D000332 1.1e-18 96.7 109 56.9
vmacro11073 Vaccinium macrocarpon HOM05D000744 ORTHO05D000332 1.1e-18 96.7 101 54.5
EL10Ac2g04055 Beta vulgaris HOM05D000744 ORTHO05D000332 1.9e-18 95.9 83 67.5
Hma1.2p1_0422F.1_g150160 Hydrangea macrophylla HOM05D000744 ORTHO05D000332 1.9e-18 95.9 114 52.6
MD15G1096400 Malus domestica HOM05D000744 ORTHO05D000332 1.9e-18 95.9 141 46.1
Ah.16g105350 Amaranthus hybridus HOM05D000744 ORTHO05D000332 2.5e-18 95.5 82 67.1
Actinidia31230 Actinidia chinensis HOM05D000744 ORTHO05D000332 5.6e-18 94.4 77 72.7
MSTRG.14020 Avicennia marina HOM05D000744 ORTHO05D000332 5.6e-18 94.4 89 61.8
MELO3C003455.2 Cucumis melo HOM05D000744 ORTHO05D000332 5.6e-18 94.4 94 59.6
MBI04_g19175_MAGBIO Magnolia biondii HOM05D000744 ORTHO05D000332 7.3e-18 94.0 79 60.8
Nitab4.5_0001567g0090 Nicotiana tabacum HOM05D000744 ORTHO05D000332 9.5e-18 93.6 129 48.1
Cc08_g09130 Coffea canephora HOM05D000744 ORTHO05D000332 1.6e-17 92.8 117 56.4
Sopen11g028950 Solanum pennellii HOM05D000744 ORTHO05D000332 3.6e-17 91.7 85 60.0
Sp7g30520 Schrenkiella parvula HOM05D000744 ORTHO05D000332 4.7e-17 91.3 89 58.4
Thhalv10024602m.g Eutrema salsugineum HOM05D000744 ORTHO05D000332 8.0e-17 90.5 89 58.4
Gohir.D05G050000 Gossypium hirsutum HOM05D000744 ORTHO05D000332 1.4e-16 89.7 64 71.9
Solyc11g071270.2 Solanum lycopersicum HOM05D000744 ORTHO05D000332 1.4e-16 89.7 85 58.8
BcaC09g52070 Brassica carinata HOM05D000744 ORTHO05D000332 1.8e-16 89.4 90 58.9
CANSAT56G4272 Cannabis sativa HOM05D000744 ORTHO05D000332 2.3e-16 89.0 115 55.7
Gohir.D08G272100 Gossypium hirsutum HOM05D000744 ORTHO05D000332 4.0e-16 88.2 110 59.1
Gohir.A05G047700 Gossypium hirsutum HOM05D000744 ORTHO05D000332 5.2e-16 87.8 64 70.3
Gorai.009G051300 Gossypium raimondii HOM05D000744 ORTHO05D000332 5.2e-16 87.8 64 70.3
ClCG11G015240 Citrullus lanatus HOM05D000744 ORTHO05D000332 6.8e-16 87.4 95 53.7
Rhsim02G0181000 Rhododendron simsii HOM05D000744 ORTHO05D000332 6.8e-16 87.4 73 64.4
Carub.0007s0773 Capsella rubella HOM05D000744 ORTHO05D000332 8.9e-16 87.0 89 59.6
Nitab4.5_0000664g0270 Nicotiana tabacum HOM05D000744 ORTHO05D000332 8.9e-16 87.0 129 46.5
Ah.10g035120 Amaranthus hybridus HOM05D000744 ORTHO05D000332 1.5e-15 86.3 81 63.0
BcaNung04525 Brassica carinata HOM05D000744 ORTHO05D000332 1.5e-15 86.3 90 57.8
AT4G32760 Arabidopsis thaliana HOM05D000744 ORTHO05D000332 2.6e-15 85.5 89 59.6
BcaNung03602 Brassica carinata HOM05D000744 ORTHO05D000332 3.4e-15 85.1 90 56.7
A03p61570 Brassica napus HOM05D000744 ORTHO05D000332 3.4e-15 85.1 90 56.7
A08p17920 Brassica napus HOM05D000744 ORTHO05D000332 3.4e-15 85.1 90 55.6
C01p06140 Brassica napus HOM05D000744 ORTHO05D000332 3.4e-15 85.1 89 56.2
C07p59330 Brassica napus HOM05D000744 ORTHO05D000332 3.4e-15 85.1 90 56.7
BolC1t00612H Brassica oleracea HOM05D000744 ORTHO05D000332 3.4e-15 85.1 89 56.2
BraA03t15199Z Brassica rapa HOM05D000744 ORTHO05D000332 3.4e-15 85.1 90 56.7
BraA08t33744Z Brassica rapa HOM05D000744 ORTHO05D000332 3.4e-15 85.1 90 55.6
Aqoxy7G01592 Aquilegia oxysepala HOM05D000744 ORTHO05D000332 5.8e-15 84.3 131 45.0
BolC3t21000H Brassica oleracea HOM05D000744 ORTHO05D000332 7.5e-15 84.0 90 53.3
Sc09g0009210 Simmondsia chinensis HOM05D000744 ORTHO05D000332 7.5e-15 84.0 105 50.5
AL7G18990 Arabidopsis lyrata HOM05D000744 ORTHO05D000332 9.8e-15 83.6 89 59.6
CARHR240750 Cardamine hirsuta HOM05D000744 ORTHO05D000332 9.8e-15 83.6 89 56.2
Gorai.004G290500 Gossypium raimondii HOM05D000744 ORTHO05D000332 9.8e-15 83.6 90 61.1
A01p05560 Brassica napus HOM05D000744 ORTHO05D000332 1.3e-14 83.2 89 55.1
BraA01t00527Z Brassica rapa HOM05D000744 ORTHO05D000332 1.3e-14 83.2 89 55.1
Gohir.A08G250533 Gossypium hirsutum HOM05D000744 ORTHO05D000332 2.2e-14 82.4 90 60.0
Aa31LG2G17200 Aethionema arabicum HOM05D000744 ORTHO05D000332 6.4e-14 80.9 91 57.1
C03p87040 Brassica napus HOM05D000744 ORTHO05D000332 6.4e-14 80.9 90 52.2
SalBow1G0030 Salvia bowleyana HOM05D000744 ORTHO05D000332 8.3e-14 80.5 104 50.0
Lj8A591T17 Lonicera japonica HOM05D000744 ORTHO05D000332 1.1e-13 80.1 108 51.9
Lj8C599T3 Lonicera japonica HOM05D000744 ORTHO05D000332 1.1e-13 80.1 108 51.9
MD08G1116900 Malus domestica HOM05D000744 ORTHO05D000332 1.4e-13 79.7 140 44.3
SalBow4G1676 Salvia bowleyana HOM05D000744 ORTHO05D000332 1.4e-13 79.7 118 48.3
BolC7t46378H Brassica oleracea HOM05D000744 ORTHO05D000332 1.8e-13 79.3 91 53.8
Lsat_1_v5_gn_1_49720 Lactuca sativa HOM05D000744 ORTHO05D000332 2.4e-13 79.0 77 62.3
MBI01_g30750_MAGBIO Magnolia biondii HOM05D000744 ORTHO05D000332 3.2e-13 78.6 79 58.2
Nn2g11684 Nelumbo nucifera HOM05D000744 ORTHO05D000332 4.1e-13 78.2 75 58.7
Aqoxy7G03830 Aquilegia oxysepala HOM05D000744 ORTHO05D000332 5.4e-13 77.8 81 58.0
RcHm_v2.0_Chr6g0305901 Rosa chinensis HOM05D000744 ORTHO05D000332 1.2e-12 76.6 150 40.0
CAN.G309.85 Capsicum annuum HOM05D000744 ORTHO05D000332 2.7e-12 75.5 124 44.4
SGA_v2.0_scaffold185G40044 Striga asiatica HOM05D000744 ORTHO05D000332 2.7e-12 75.5 100 50.0
Migut.A00227 Erythranthe guttata HOM05D000744 ORTHO05D000332 3.5e-12 75.1 70 64.3
Lj7C705T16 Lonicera japonica HOM05D000744 ORTHO05D000332 6.0e-12 74.3 126 45.2
Lj1g0001142 Lotus japonicus HOM05D000744 ORTHO05D000332 6.0e-12 74.3 100 53.0
Actinidia14664 Actinidia chinensis HOM05D000744 ORTHO05D007222 7.8e-12 73.9 80 53.8
Sed0008487 Sechium edule HOM05D000744 ORTHO05D000332 1.0e-11 73.6 62 62.9
FAN20G2935 Fragaria x ananassa HOM05D000744 ORTHO05D000332 2.3e-11 72.4 149 40.3
THA.LOC104803809 Tarenaya hassleriana HOM05D000744 ORTHO05D000332 5.0e-11 71.2 95 48.4
unitig_0.g2804 Utricularia gibba HOM05D000744 ORTHO05D000332 5.0e-11 71.2 110 40.9
DCAR_003115 Daucus carota HOM05D000744 ORTHO05D000332 6.6e-11 70.9 68 60.3
VMungo1309G2017 Vigna mungo HOM05D000744 ORTHO05D000332 1.1e-10 70.1 59 66.1
HanXRQChr01g0029611 Helianthus annuus HOM05D000744 ORTHO05D000332 1.5e-10 69.7 97 50.5
Migut.E01515 Erythranthe guttata HOM05D000744 ORTHO05D000332 4.3e-10 68.2 103 50.5
Zm00001eb339240 Zea mays HOM05D000744 ORTHO05D000332 4.3e-10 68.2 109 45.0
CDE08G0734 Ceratophyllum demersum HOM05D000744 ORTHO05D000332 5.6e-10 67.8 105 45.7
Phvul.009G107100 Phaseolus vulgaris HOM05D000744 ORTHO05D000332 7.3e-10 67.4 59 66.1
FAN15G3057 Fragaria x ananassa HOM05D000744 ORTHO05D000332 9.5e-10 67.0 127 37.8
Hund03411 Selenicereus undatus HOM05D000744 ORTHO05D000332 1.2e-09 66.6 74 56.8
ATR0315G082 Amborella trichopoda HOM05D000744 ORTHO05D000332 1.6e-09 66.2 71 59.2
THA.LOC104815057 Tarenaya hassleriana HOM05D000744 ORTHO05D000332 2.1e-09 65.9 100 48.0
DCAR_003116 Daucus carota HOM05D000744 ORTHO05D000332 3.6e-09 65.1 116 44.8
AT3G08790 Arabidopsis thaliana HOM05D000744 ORTHO05D000332 4.7e-09 64.7 94 48.9
Os06g0332400 Oryza sativa ssp. japonica HOM05D000744 ORTHO05D000332 6.2e-09 64.3 122 41.0
PSO210G0796 Papaver somniferum HOM05D000744 ORTHO05D000332 1.1e-08 63.5 64 59.4
Thhalv10022036m.g Eutrema salsugineum HOM05D000744 ORTHO05D000332 2.3e-08 62.4 100 48.0
HanXRQChr11g0351721 Helianthus annuus HOM05D000744 ORTHO05D000332 4.0e-08 61.6 81 48.1
Carub.0003s0792 Capsella rubella HOM05D000744 ORTHO05D000332 5.2e-08 61.2 86 51.2
HPP92_000519 Vanilla planifolia HOM05D000744 ORTHO05D000332 5.2e-08 61.2 97 48.5
CARHR083110 Cardamine hirsuta HOM05D000744 ORTHO05D000332 6.8e-08 60.8 100 45.0
PSO210G2176 Papaver somniferum HOM05D000744 ORTHO05D000332 6.8e-08 60.8 90 50.0
AL3G19790 Arabidopsis lyrata HOM05D000744 ORTHO05D000332 8.9e-08 60.5 89 47.2
Sp3g07210 Schrenkiella parvula HOM05D000744 ORTHO05D000332 8.9e-08 60.5 98 48.0
HanXRQChr04g0105881 Helianthus annuus HOM05D000744 ORTHO05D000332 2.6e-07 58.9 112 42.0
Aa31LG5G18790 Aethionema arabicum HOM05D000744 ORTHO05D000332 4.4e-07 58.2 95 42.1
Os01g0229200 Oryza sativa ssp. japonica HOM05D000744 ORTHO05D000332 9.8e-07 57.0 111 39.6
Zm00001eb382580 Zea mays HOM05D000744 ORTHO05D000332 9.8e-07 57.0 104 40.4
ECA248G2544 Erigeron canadensis HOM05D000744 ORTHO05D000332 2.9e-06 55.5 142 36.6
CDE02G4071 Ceratophyllum demersum HOM05D000744 ORTHO05D000332 3.7e-06 55.1 66 48.5
ECA246G1785 Erigeron canadensis HOM05D000744 ORTHO05D000332 4.9e-06 54.7 98 42.9
Psat0s2227g0200 Pisum sativum HOM05D003122 ORTHO05D000002 4.9e-06 54.7 61 55.7
PSO782G4033 Papaver somniferum HOM05D000744 ORTHO05D000332 6.4e-06 54.3 43 67.4


User provided reference genes

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