Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 2158.6 1092 100.0
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1671.4 1073 77.0
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1666.7 1095 75.9
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1657.5 1073 76.2
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1656.0 1072 76.8
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1648.3 1075 75.3
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1637.5 1105 74.6
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1633.6 1082 75.3
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1629.8 1081 75.1
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1625.5 1081 74.0
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1625.1 1083 74.4
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1618.6 1076 74.3
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1617.4 1083 75.3
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1609.7 1078 75.1
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1607.8 1075 74.2
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1602.8 1091 73.8
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1599.3 1077 73.5
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1582.8 1090 72.9
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1581.6 1073 72.5
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1581.6 1074 73.5
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1575.5 1081 73.6
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1574.3 1076 73.8
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1573.5 1076 72.0
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1573.5 1076 73.6
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1571.2 1076 73.8
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1569.7 1075 73.9
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1565.8 1094 72.5
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1563.1 1066 72.8
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1561.6 1074 72.4
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1560.4 1083 72.3
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1559.3 1070 73.2
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1559.3 1072 72.3
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1557.7 1110 70.0
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1557.7 1071 73.3
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1555.8 1063 73.4
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1551.6 1069 72.6
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1551.6 1082 71.2
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1547.3 1081 71.0
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1546.2 1078 71.5
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1543.5 1070 72.6
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1543.1 1077 72.3
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1540.0 1079 70.3
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1539.2 1069 72.3
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1538.9 1078 72.2
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1536.5 1069 72.1
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1536.5 1076 71.7
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1536.2 1082 71.3
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1536.2 1077 71.9
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1534.2 1069 71.9
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1533.9 1077 71.7
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1533.5 1081 70.0
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1527.7 1077 71.6
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1523.5 1075 71.2
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1523.1 1077 71.3
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1520.8 1074 71.2
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1519.2 1082 69.9
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1518.4 1078 70.3
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1518.1 1075 71.6
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1514.6 1079 70.2
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1508.0 1070 71.5
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1506.1 1078 70.9
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1505.3 1076 70.2
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1505.0 1081 69.8
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1504.2 1069 70.3
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1503.8 1075 69.8
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1501.9 1118 68.2
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1496.1 1074 70.9
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1495.7 1076 69.1
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1491.1 1072 70.2
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1490.3 1073 69.9
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1481.8 1072 70.1
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1475.7 1085 68.2
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1474.5 1068 69.7
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1468.0 1082 68.3
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1465.7 1068 69.9
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1461.4 1070 70.1
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1459.9 1078 69.4
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1459.5 1075 69.6
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1453.7 984 74.6
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1448.7 1069 69.1
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1442.9 1211 63.1
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1434.5 1077 68.7
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1401.0 938 74.5
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1393.3 1132 64.4
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1384.8 1084 64.5
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1377.8 1083 65.2
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1367.1 1079 66.0
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1330.5 1093 62.5
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1325.1 941 70.8
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1320.4 1079 62.4
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1281.2 1197 56.8
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1188.7 1070 57.5
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1178.7 758 75.5
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1167.5 967 64.2
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1158.3 757 75.4
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1146.3 1078 58.1
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 4.8e-309 1064.7 757 71.1
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.8e-303 1046.2 719 73.2
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 1.7e-290 1003.0 1078 49.4
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 6.1e-280 968.0 1011 54.9
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 1.1e-276 957.2 1084 48.9
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 1.3e-245 854.0 616 70.8
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 2.9e-237 826.2 715 60.1
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 5.4e-236 822.0 1015 46.4
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 2.1e-227 793.5 536 73.5
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 6.2e-200 702.2 507 69.8
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 2.1e-192 677.2 654 56.7
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 2.0e-190 670.6 1508 32.3
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 1.7e-165 587.8 399 72.9
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.4e-130 471.9 340 70.9
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.5e-84 318.9 203 77.8
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 2.2e-56 225.3 163 67.5
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 7.2e-39 167.2 106 75.5
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.5e-25 121.7 59 89.8
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 6.4e-19 100.9 54 81.5
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 3.9e-16 91.7 65 63.1
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.4e-10 73.2 54 59.3
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.4e-10 73.2 54 59.3
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 1.7e-08 66.2 74 47.3
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.0e-08 65.5 40 70.0
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 3.0e-08 65.5 74 47.3
SEGI_36326 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.1e-07 63.5 90 38.9
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 3.3e-07 62.0 137 35.0


User provided reference genes

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