Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 1.1e-84 316.6 169 100.0
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.7e-11 73.6 59 59.3
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.1e-10 70.9 52 67.3
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 1.4e-10 70.5 45 71.1
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 2.4e-10 69.7 54 63.0
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.2e-10 69.3 52 61.5
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 3.2e-10 69.3 52 63.5
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 4.1e-10 68.9 52 61.5
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 4.1e-10 68.9 43 72.1
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 4.1e-10 68.9 43 67.4
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 7.1e-10 68.2 52 61.5
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 9.2e-10 67.8 52 63.5
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 1.2e-09 67.4 43 72.1
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 1.6e-09 67.0 52 59.6
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.6e-09 67.0 45 71.1
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 2.1e-09 66.6 54 61.1
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.7e-09 66.2 60 60.0
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 2.7e-09 66.2 52 59.6
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 4.6e-09 65.5 45 68.9
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 4.6e-09 65.5 42 69.0
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 4.6e-09 65.5 52 59.6
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 4.6e-09 65.5 34 88.2
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 6.0e-09 65.1 34 82.4
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 6.0e-09 65.1 48 64.6
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 6.0e-09 65.1 34 82.4
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 7.8e-09 64.7 41 75.6
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 7.8e-09 64.7 41 75.6
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.0e-08 64.3 43 69.8
Eucgr.D00606 Eucalyptus grandis HOM05D003630 ORTHO05D004151 1.0e-08 64.3 38 76.3
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.0e-08 64.3 36 80.6
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.0e-08 64.3 36 80.6
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 1.0e-08 64.3 36 80.6
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 1.0e-08 64.3 46 65.2
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 1.3e-08 63.9 45 66.7
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 1.3e-08 63.9 45 66.7
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 1.3e-08 63.9 45 66.7
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.3e-08 63.9 44 72.7
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.3e-08 63.9 44 72.7
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.3e-08 63.9 43 67.4
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.3e-08 63.9 34 79.4
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.7e-08 63.5 54 64.8
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 1.7e-08 63.5 29 100.0
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 1.7e-08 63.5 29 100.0
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 1.7e-08 63.5 29 100.0
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 1.7e-08 63.5 34 79.4
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 2.3e-08 63.2 42 69.0
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 2.3e-08 63.2 35 74.3
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 2.3e-08 63.2 43 72.1
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 3.0e-08 62.8 45 64.4
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 3.9e-08 62.4 36 77.8
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 3.9e-08 62.4 52 61.5
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 3.9e-08 62.4 29 96.6
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 5.1e-08 62.0 45 64.4
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 5.1e-08 62.0 45 64.4
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 5.1e-08 62.0 43 72.1
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 6.6e-08 61.6 34 76.5
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 6.6e-08 61.6 36 72.2
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 1.1e-07 60.8 40 70.0
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.1e-07 60.8 37 75.7
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.1e-07 60.8 52 51.9
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 1.5e-07 60.5 29 89.7
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 1.5e-07 60.5 29 89.7
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 1.9e-07 60.1 30 90.0
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 1.9e-07 60.1 40 62.5
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 2.5e-07 59.7 48 54.2
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 2.5e-07 59.7 39 71.8
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 2.5e-07 59.7 43 67.4
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 2.5e-07 59.7 31 77.4
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 3.3e-07 59.3 39 66.7
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 4.3e-07 58.9 43 60.5
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 4.3e-07 58.9 43 60.5
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 4.3e-07 58.9 29 89.7
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 5.6e-07 58.5 43 65.1
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 5.6e-07 58.5 43 62.8
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 7.3e-07 58.2 36 75.0
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 7.3e-07 58.2 53 58.5
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 9.5e-07 57.8 37 67.6
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 9.5e-07 57.8 48 58.3
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 9.5e-07 57.8 43 62.8
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 1.2e-06 57.4 44 59.1
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.6e-06 57.0 48 47.9
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.1e-06 56.6 44 61.4
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.1e-06 56.6 44 61.4
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 2.1e-06 56.6 30 83.3
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 2.8e-06 56.2 36 72.2
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 2.8e-06 56.2 44 61.4
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 2.8e-06 56.2 37 67.6
MD05G1311800 Malus domestica HOM05D003630 ORTHO05D004151 2.8e-06 56.2 39 71.8
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 3.6e-06 55.8 41 68.3
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 3.6e-06 55.8 41 63.4
Peaxi162Scf00461g01011 Petunia axillaris HOM05D003630 ORTHO05D004151 4.7e-06 55.5 45 57.8
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 6.2e-06 55.1 44 59.1
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 8.1e-06 54.7 41 63.4
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 8.1e-06 54.7 29 79.3
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 8.1e-06 54.7 27 85.2
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 8.1e-06 54.7 29 79.3


User provided reference genes

Program Settings