Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03256 Eucalyptus grandis HOM05D008668 ORTHO05D010653 6.7e-99 364.0 183 100.0
Thecc.06G183300 Theobroma cacao HOM05D008668 ORTHO05D010653 9.9e-26 120.9 173 42.2
Dinv17338 Davidia involucrata HOM05D008668 ORTHO05D010653 7.9e-23 111.3 181 39.8
Prupe.4G050900 Prunus persica HOM05D008668 ORTHO05D010653 1.3e-20 104.0 170 39.4
Cfa000511 Carpinus fangiana HOM05D008668 ORTHO05D010653 3.1e-19 99.4 172 41.3
Haze_06401 Corylus avellana HOM05D008668 ORTHO05D010653 5.3e-19 98.6 170 41.2
Ciclev10017813m.g Citrus clementina HOM05D008668 ORTHO05D010653 7.6e-18 94.7 172 39.0
COL.COLO4_31435 Corchorus olitorius HOM05D008668 ORTHO05D010653 1.0e-17 94.4 169 36.7
QL05p041791 Quercus lobata HOM05D008668 ORTHO05D010653 2.9e-17 92.8 176 35.8
Cpa.g.sc373.2 Carica papaya HOM05D008668 ORTHO05D010653 3.2e-16 89.4 168 37.5
Lj6g0024090 Lotus japonicus HOM05D008668 ORTHO05D010653 3.2e-16 89.4 168 38.1
Dinv40588 Davidia involucrata HOM05D008668 ORTHO05D010653 5.5e-16 88.6 173 35.8
FAN21G3728 Fragaria x ananassa HOM05D008668 ORTHO05D010653 1.6e-15 87.0 169 39.1
Manes.17G048000 Manihot esculenta HOM05D008668 ORTHO05D010653 1.6e-15 87.0 173 35.3
Ca_00351_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 2.7e-15 86.3 187 35.8
FAN25G1913 Fragaria x ananassa HOM05D008668 ORTHO05D010653 2.7e-15 86.3 169 38.5
Medtr2g014250 Medicago truncatula HOM05D008668 ORTHO05D010653 2.7e-15 86.3 176 37.5
FvH4_3g08820 Fragaria vesca HOM05D008668 ORTHO05D010653 3.5e-15 85.9 169 37.3
FAN11G1694 Fragaria x ananassa HOM05D008668 ORTHO05D010653 3.5e-15 85.9 169 37.3
Glyma.13G236900 Glycine max HOM05D008668 ORTHO05D010653 7.9e-15 84.7 167 40.1
Glyma.15G076600 Glycine max HOM05D008668 ORTHO05D010653 3.0e-14 82.8 190 37.4
FAN16G1191 Fragaria x ananassa HOM05D008668 ORTHO05D010653 1.5e-13 80.5 169 36.7
Gohir.D10G027650 Gossypium hirsutum HOM05D008668 ORTHO05D010653 4.3e-13 79.0 172 34.9
Gorai.011G029500 Gossypium raimondii HOM05D008668 ORTHO05D010653 4.3e-13 79.0 172 34.9
Gohir.A10G027250 Gossypium hirsutum HOM05D008668 ORTHO05D010653 5.7e-13 78.6 181 34.8
TPR.G16527 Trifolium pratense HOM05D008668 ORTHO05D010653 5.7e-13 78.6 188 34.0
Psat0s1495g0120 Pisum sativum HOM05D008668 ORTHO05D010653 7.4e-13 78.2 170 35.9
TPR.G16328 Trifolium pratense HOM05D008668 ORTHO05D010653 1.3e-12 77.4 171 35.7
Ca_18577_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 1.8e-11 73.6 173 34.7
Psat1g203600 Pisum sativum HOM05D008668 ORTHO05D010653 1.5e-10 70.5 169 34.3
DCAR_003388 Daucus carota HOM05D008668 ORTHO05D010653 2.0e-10 70.1 165 35.2
Medtr4g088510 Medicago truncatula HOM05D008668 ORTHO05D010653 2.0e-10 70.1 169 33.7
Lj4g0022764 Lotus japonicus HOM05D008668 ORTHO05D010653 7.7e-10 68.2 187 31.6
Potri.011G056500 Populus trichocarpa HOM05D008668 ORTHO05D010653 7.7e-10 68.2 174 29.9
Actinidia07593 Actinidia chinensis HOM05D008668 ORTHO05D010653 6.5e-09 65.1 188 29.3
VMungo0251G3566 Vigna mungo HOM05D008668 ORTHO05D010653 7.2e-08 61.6 174 29.9
Glyma.13G177100 Glycine max HOM05D008668 ORTHO05D010653 6.1e-07 58.5 180 33.9
CSS0023827 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 7.9e-07 58.2 175 32.0
Lalb_Chr16g0383941 Lupinus albus HOM05D008668 ORTHO05D010653 1.0e-06 57.8 183 31.7
CSS0028958 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 1.4e-06 57.4 175 32.6
Peaxi162Scf00243g00023 Petunia axillaris HOM05D018325 ORTHO05D010653 1.4e-06 57.4 134 33.6
Glyma.07G199300 Glycine max HOM05D008668 ORTHO05D010653 5.1e-06 55.5 178 33.1
PGSC0003DMG400029711 Solanum tuberosum HOM05D018325 ORTHO05D010653 5.1e-06 55.5 155 34.2
Sopen02g022720 Solanum pennellii HOM05D018325 ORTHO05D010653 8.8e-06 54.7 152 32.9


User provided reference genes

Program Settings