Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 4.2e-110 401.4 202 100.0
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.4e-81 305.8 158 96.8
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 4.1e-81 305.1 167 89.8
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.3e-79 299.3 168 86.9
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 5.0e-79 298.1 168 86.3
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 5.0e-79 298.1 168 86.3
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 1.1e-78 297.0 194 75.8
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.4e-76 290.0 170 82.4
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 2.3e-76 289.3 179 79.9
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 8.9e-76 287.3 195 76.4
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 8.9e-76 287.3 165 84.2
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 1.2e-75 287.0 199 72.4
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 1.2e-75 287.0 194 76.3
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 2.0e-75 286.2 174 81.0
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 2.6e-75 285.8 161 84.5
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 3.4e-75 285.4 162 84.0
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 5.7e-75 284.6 173 79.8
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 7.5e-75 284.3 170 81.2
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 1.3e-74 283.5 192 75.5
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 1.3e-74 283.5 192 75.5
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 3.7e-74 282.0 162 84.0
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.1e-73 280.4 170 78.8
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 1.1e-73 280.4 201 73.1
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 1.4e-73 280.0 203 70.0
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 4.1e-73 278.5 176 79.0
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 9.2e-73 277.3 184 77.2
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 9.2e-73 277.3 175 76.6
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 9.2e-73 277.3 165 81.2
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 1.2e-72 276.9 162 80.9
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 1.2e-72 276.9 159 83.0
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 1.2e-72 276.9 166 78.9
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 2.7e-72 275.8 161 80.1
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 2.7e-72 275.8 191 73.8
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 3.5e-72 275.4 165 82.4
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 4.5e-72 275.0 153 84.3
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 5.9e-72 274.6 162 81.5
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 5.9e-72 274.6 163 80.4
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 1.3e-71 273.5 167 78.4
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 2.3e-71 272.7 170 77.6
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 2.9e-71 272.3 207 67.6
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 3.9e-71 271.9 182 73.6
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 4.3e-70 268.5 174 77.0
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 7.3e-70 267.7 170 79.4
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.2e-69 266.9 156 82.7
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 1.6e-69 266.5 165 78.8
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 8.0e-69 264.2 184 72.8
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 1.0e-68 263.8 174 75.3
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 1.4e-68 263.5 168 75.0
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.4e-68 263.5 163 80.4
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.8e-68 263.1 152 84.2
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.1e-68 262.3 148 86.5
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 3.1e-68 262.3 153 83.0
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 3.1e-68 262.3 153 83.0
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 4.0e-68 261.9 163 79.8
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 4.0e-68 261.9 153 83.0
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 6.8e-68 261.2 159 79.9
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 2.0e-67 259.6 167 77.2
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 3.4e-67 258.8 160 80.0
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 3.4e-67 258.8 163 80.4
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 3.4e-67 258.8 153 81.7
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 1.7e-66 256.5 173 74.0
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 2.2e-66 256.1 149 83.9
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 2.2e-66 256.1 163 77.9
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.7e-66 255.4 173 75.1
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 3.7e-66 255.4 166 75.3
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 4.9e-66 255.0 148 81.8
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 8.3e-66 254.2 166 75.3
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 1.1e-65 253.8 169 77.5
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.9e-65 253.1 185 72.4
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.9e-65 253.1 185 72.4
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 2.4e-65 252.7 161 77.6
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 3.2e-65 252.3 148 82.4
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 5.4e-65 251.5 160 78.8
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.2e-64 250.4 153 78.4
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 1.0e-63 247.3 148 81.8
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 8.6e-63 244.2 163 76.7
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 3.3e-62 242.3 148 78.4
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 7.3e-62 241.1 171 73.1
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 7.3e-62 241.1 164 73.8
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 4.7e-61 238.4 164 75.0
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 6.2e-61 238.0 138 82.6
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 1.1e-60 237.3 162 75.9
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 1.4e-60 236.9 157 77.7
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 2.6e-59 232.6 186 65.6
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 4.4e-59 231.9 152 72.4
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 5.8e-59 231.5 230 56.5
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 9.8e-59 230.7 157 72.6
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 2.9e-58 229.2 124 87.1
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 2.9e-58 229.2 134 79.9
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.1e-57 227.3 162 69.1
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 1.9e-57 226.5 148 73.0
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 7.8e-56 221.1 167 64.1
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.1e-54 217.2 161 70.8
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 1.2e-48 197.2 198 60.1
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 2.8e-45 186.0 197 53.8
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 2.8e-45 186.0 155 63.2
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 7.6e-43 177.9 143 64.3
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 6.4e-42 174.9 153 60.8
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 2.4e-41 172.9 108 75.0
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 6.0e-40 168.3 127 69.3
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 1.1e-38 164.1 95 81.1
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 1.9e-38 163.3 192 50.5
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 1.3e-37 160.6 115 64.3
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 2.4e-36 156.4 149 53.7
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.5e-35 153.7 99 74.7
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 9.9e-35 151.0 162 51.9
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 1.7e-31 140.2 149 50.3
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.5e-30 137.1 148 45.3
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 2.8e-29 132.9 79 74.7
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 8.1e-21 104.8 86 59.3
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 6.5e-18 95.1 148 42.6
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.3e-15 87.4 79 62.0
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 8.4e-10 68.2 42 76.2


User provided reference genes

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