Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.2e-125 451.4 295 100.0
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.8e-46 189.9 111 96.4
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-45 187.6 111 96.4
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-45 187.6 111 95.5
Eucgr.A01942 Eucalyptus grandis HOM05D005898 ORTHO05D007493 2.1e-41 173.7 121 82.6
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.3e-40 170.2 109 88.1
Eucgr.J01273 Eucalyptus grandis HOM05D005898 ORTHO05D007493 1.7e-38 164.1 121 81.8
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.0e-29 132.1 72 100.0
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 9.4e-10 68.6 72 56.9
Eucgr.G00712 Eucalyptus grandis HOM05D000114 ORTHO05D000075 6.1e-09 65.9 33 97.0
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 8.0e-09 65.5 98 45.9
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.0e-08 65.1 84 51.2
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.4e-08 64.7 91 50.5
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 2.3e-08 63.9 49 67.3
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 3.0e-08 63.5 86 48.8
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.0e-08 63.5 69 53.6
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.0e-08 63.2 107 44.9
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 4.0e-08 63.2 99 46.5
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 5.2e-08 62.8 82 46.3
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.2e-08 62.8 69 52.2
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 6.8e-08 62.4 47 70.2
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.8e-08 62.0 32 100.0
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.2e-07 61.6 71 47.9
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.5e-07 61.2 45 68.9
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.5e-07 61.2 48 70.8
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.5e-07 61.2 69 52.2
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 2.0e-07 60.8 109 44.0
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 2.6e-07 60.5 113 45.1
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 4.4e-07 59.7 96 44.8
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 4.4e-07 59.7 38 76.3
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 4.4e-07 59.7 69 49.3
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 4.4e-07 59.7 73 49.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.7e-07 59.3 108 42.6
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 5.7e-07 59.3 113 45.1
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 7.5e-07 58.9 109 42.2
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.3e-06 58.2 69 52.2
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.3e-06 58.2 79 45.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.3e-06 58.2 79 45.6
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.3e-06 58.2 66 54.5
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.3e-06 58.2 102 44.1
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.7e-06 57.8 55 60.0
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.7e-06 57.8 100 44.0
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 2.2e-06 57.4 36 80.6
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 2.8e-06 57.0 38 73.7
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 2.8e-06 57.0 86 38.4
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 3.7e-06 56.6 110 42.7
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 3.7e-06 56.6 87 46.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 4.8e-06 56.2 79 49.4
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 4.8e-06 56.2 56 51.8
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 4.8e-06 56.2 75 48.0
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 4.8e-06 56.2 109 41.3
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 6.3e-06 55.8 35 80.0
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.3e-06 55.8 35 80.0
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.3e-06 55.8 35 80.0
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 6.3e-06 55.8 101 47.5
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 8.3e-06 55.5 62 54.8
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 8.3e-06 55.5 36 72.2
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 8.3e-06 55.5 100 44.0
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 8.3e-06 55.5 74 48.6
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 8.3e-06 55.5 74 48.6


User provided reference genes

Program Settings