Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 6.7e-198 693.7 330 100.0
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 2.4e-171 605.5 317 89.3
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 4.5e-170 601.3 318 86.2
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.0e-169 600.1 316 87.7
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.3e-169 599.7 325 87.1
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.7e-169 599.4 325 86.2
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.7e-169 599.4 316 87.7
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 1.7e-169 599.4 325 86.2
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 2.2e-169 599.0 314 87.3
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.8e-169 598.2 325 85.8
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 6.5e-169 597.4 316 87.3
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 6.5e-169 597.4 316 87.3
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.1e-168 596.7 325 86.2
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 1.1e-168 596.7 317 87.7
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 1.5e-168 596.3 325 84.0
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 2.5e-168 595.5 326 84.0
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.2e-168 595.1 324 86.4
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 4.2e-168 594.7 325 84.6
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 5.5e-168 594.3 322 86.0
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 7.2e-168 594.0 322 86.0
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 9.4e-168 593.6 324 84.9
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.2e-167 593.2 330 83.9
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.6e-167 592.8 316 87.0
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.6e-167 592.8 323 85.8
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.6e-167 592.8 327 85.0
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 2.7e-167 592.0 322 85.4
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 4.7e-167 591.3 324 84.9
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 4.7e-167 591.3 312 87.8
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.7e-167 591.3 327 85.3
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 4.7e-167 591.3 326 83.7
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 8.0e-167 590.5 326 83.4
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.8e-166 589.3 315 86.0
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 1.8e-166 589.3 325 83.4
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 3.0e-166 588.6 325 84.6
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.0e-166 588.6 324 84.0
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 5.2e-166 587.8 327 85.0
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 5.2e-166 587.8 317 86.4
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 6.8e-166 587.4 325 84.3
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 8.8e-166 587.0 319 84.6
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 8.8e-166 587.0 325 83.7
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.5e-165 586.3 327 84.1
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 1.5e-165 586.3 325 84.3
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 2.0e-165 585.9 327 84.1
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 2.0e-165 585.9 330 83.9
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 2.0e-165 585.9 330 83.9
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 2.0e-165 585.9 328 82.9
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 2.6e-165 585.5 322 84.5
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.4e-165 584.7 327 83.5
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 4.4e-165 584.7 325 84.0
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 7.5e-165 583.9 325 83.4
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 9.8e-165 583.6 310 86.1
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 9.8e-165 583.6 322 83.9
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 1.7e-164 582.8 315 86.0
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 2.2e-164 582.4 326 84.0
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 2.2e-164 582.4 318 84.6
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 2.2e-164 582.4 325 83.7
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 3.7e-164 581.6 325 82.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 4.8e-164 581.3 321 83.8
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 1.1e-163 580.1 325 81.5
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.1e-163 580.1 280 98.2
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 1.1e-163 580.1 321 82.2
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 1.8e-163 579.3 330 81.8
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 1.8e-163 579.3 325 83.7
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.4e-163 578.9 316 83.5
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 3.1e-163 578.6 329 81.5
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 3.1e-163 578.6 319 84.3
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 4.1e-163 578.2 330 82.1
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 4.1e-163 578.2 320 82.5
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 4.1e-163 578.2 320 82.5
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 7.0e-163 577.4 320 83.1
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 9.1e-163 577.0 330 80.3
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 9.1e-163 577.0 329 81.2
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 9.1e-163 577.0 329 81.2
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 9.1e-163 577.0 324 82.1
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.2e-162 576.6 320 83.1
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 1.6e-162 576.2 323 83.0
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 2.0e-162 575.9 325 81.2
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.7e-162 575.5 320 83.1
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 5.9e-162 574.3 325 82.8
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 1.3e-161 573.2 321 82.9
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 3.8e-161 571.6 383 72.8
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 8.6e-161 570.5 317 82.6
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 8.6e-161 570.5 329 80.2
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 8.6e-161 570.5 329 80.2
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 7.2e-160 567.4 326 79.4
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 7.2e-160 567.4 324 81.2
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 9.5e-160 567.0 317 82.6
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 1.6e-159 566.2 312 83.7
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 4.7e-159 564.7 312 82.4
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.0e-158 563.5 322 82.9
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 2.3e-158 562.4 327 80.1
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 6.8e-158 560.8 307 85.7
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 6.8e-158 560.8 316 82.3
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 1.2e-157 560.1 317 81.4
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.2e-157 560.1 326 81.3
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 2.6e-157 558.9 327 80.1
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 5.7e-157 557.8 324 81.5
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 3.7e-156 555.1 320 80.0
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 5.9e-154 547.7 316 79.7
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.0e-153 547.0 324 78.1
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 1.9e-152 542.7 314 79.6
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 2.5e-152 542.3 317 78.5
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 1.4e-150 536.6 347 73.8
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.8e-150 536.2 296 82.4
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 2.0e-149 532.7 324 76.2
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 5.8e-149 531.2 324 75.9
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 4.6e-146 521.5 321 76.0
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.0e-145 518.8 317 74.4
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 7.3e-144 514.2 316 78.8
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.2e-143 513.5 315 74.3
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 1.5e-141 506.5 273 85.7
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 3.7e-140 501.9 304 74.0
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 6.6e-137 491.1 279 82.8
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 1.2e-135 486.9 321 70.1
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 2.1e-130 469.5 337 68.2
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 8.6e-129 464.2 309 67.0
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.1e-126 457.2 317 65.3
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.1e-126 457.2 317 65.3
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.8e-126 456.4 309 66.0
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 1.3e-124 450.3 251 81.3
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 4.6e-114 415.2 229 84.7
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.3e-113 413.7 308 59.4
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 2.6e-101 372.9 313 56.2
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 2.2e-100 369.8 250 69.2
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 1.1e-94 350.9 215 75.3
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 1.1e-88 330.9 323 49.5
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 8.8e-81 304.7 352 43.5
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 4.8e-71 272.3 369 40.1
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 2.7e-53 213.4 123 74.8
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 6.8e-33 145.6 82 84.1
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 1.2e-29 134.8 89 74.2
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.7e-21 107.1 75 72.0
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 1.0e-20 105.1 68 70.6
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 4.1e-14 83.2 45 77.8
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 2.7e-13 80.5 41 82.9
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 3.5e-13 80.1 42 78.6
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 3.9e-12 76.6 68 58.8
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 9.9e-08 62.0 42 59.5


User provided reference genes

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