Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 6.6e-63 244.6 204 100.0
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 4.2e-41 172.2 125 73.6
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 6.7e-39 164.9 125 74.4
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 3.3e-38 162.5 125 69.6
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.6e-37 160.2 125 70.4
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 3.7e-37 159.1 125 74.4
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 4.8e-37 158.7 125 68.8
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 4.8e-37 158.7 125 69.6
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.8e-37 158.7 125 72.0
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.8e-36 156.8 125 69.6
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.8e-36 156.8 125 69.6
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.8e-36 156.8 125 69.6
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.8e-36 156.8 124 70.2
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 4.1e-36 155.6 125 68.0
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 6.9e-36 154.8 128 65.6
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 9.0e-36 154.5 125 68.0
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 2.0e-35 153.3 125 66.4
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.4e-35 152.5 125 64.8
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 4.5e-35 152.1 125 64.8
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 4.5e-35 152.1 125 67.2
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 5.9e-35 151.8 125 67.2
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.7e-34 150.2 125 65.6
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.2e-34 149.8 125 66.4
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 2.2e-34 149.8 125 66.4
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.2e-34 149.8 127 66.9
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 2.2e-34 149.8 125 67.2
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 2.9e-34 149.4 125 65.6
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 5.0e-34 148.7 128 66.4
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 6.5e-34 148.3 128 67.2
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 6.5e-34 148.3 125 65.6
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.1e-33 147.5 129 67.4
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 1.1e-33 147.5 128 67.2
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.1e-33 147.5 125 66.4
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 1.9e-33 146.7 130 66.2
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.5e-33 146.4 125 64.8
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 3.2e-33 146.0 129 66.7
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 4.2e-33 145.6 117 70.1
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 4.2e-33 145.6 117 70.1
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 5.5e-33 145.2 125 62.4
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 7.2e-33 144.8 119 67.2
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 9.4e-33 144.4 130 66.2
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.2e-32 144.1 125 61.6
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.6e-32 143.7 126 62.7
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.6e-32 143.7 126 62.7
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.6e-32 143.7 126 62.7
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.6e-32 143.7 124 64.5
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 1.6e-32 143.7 117 69.2
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 2.1e-32 143.3 126 61.9
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 2.1e-32 143.3 125 61.6
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 2.1e-32 143.3 125 63.2
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.1e-32 143.3 125 63.2
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.1e-32 143.3 125 63.2
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 2.1e-32 143.3 125 62.4
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 2.1e-32 143.3 117 69.2
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 2.1e-32 143.3 117 69.2
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 2.7e-32 142.9 125 62.4
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 2.7e-32 142.9 117 69.2
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.7e-32 142.9 92 80.4
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 3.6e-32 142.5 125 60.8
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 4.6e-32 142.1 125 61.6
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 6.1e-32 141.7 125 62.4
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.0e-31 141.0 128 64.1
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 1.8e-31 140.2 128 63.3
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.8e-31 140.2 119 67.2
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 2.3e-31 139.8 125 64.0
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 2.3e-31 139.8 128 63.3
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.3e-31 139.8 167 52.1
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 3.0e-31 139.4 95 78.9
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 5.1e-31 138.7 129 61.2
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.7e-31 138.3 128 61.7
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 6.7e-31 138.3 128 60.9
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 8.8e-31 137.9 128 61.7
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.5e-30 137.1 171 54.4
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 2.0e-30 136.7 125 60.0
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 2.6e-30 136.3 117 64.1
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.6e-30 136.3 117 67.5
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 3.3e-30 136.0 127 62.2
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 3.3e-30 136.0 127 61.4
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 4.3e-30 135.6 126 59.5
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 4.3e-30 135.6 129 59.7
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 5.7e-30 135.2 128 60.2
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.3e-29 134.0 124 62.1
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.2e-29 133.3 129 59.7
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 3.7e-29 132.5 126 61.9
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 3.7e-29 132.5 126 61.9
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.3e-29 131.7 121 62.0
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 8.2e-29 131.3 100 69.0
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 8.2e-29 131.3 90 76.7
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 2.4e-28 129.8 82 82.9
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.4e-28 129.8 118 63.6
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 2.4e-28 129.8 127 60.6
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 4.1e-28 129.0 82 76.8
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.3e-28 128.6 90 74.4
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.9e-28 128.3 90 74.4
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 6.9e-28 128.3 127 63.0
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 6.9e-28 128.3 127 59.8
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 3.4e-27 125.9 117 63.2
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 4.5e-27 125.6 123 59.3
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.0e-26 124.4 74 83.8
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.0e-26 124.4 99 67.7
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.3e-26 124.0 124 59.7
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 2.2e-26 123.2 70 88.6
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 3.8e-26 122.5 92 71.7
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 5.0e-26 122.1 95 68.4
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 6.5e-26 121.7 95 68.4
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 3.2e-25 119.4 116 59.5
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 5.5e-25 118.6 67 88.1
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 7.2e-25 118.2 114 63.2
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 1.2e-24 117.5 92 67.4
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.7e-24 116.3 91 65.9
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 4.7e-24 115.5 87 69.0
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.1e-24 115.2 180 45.0
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 2.3e-23 113.2 125 56.8
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 1.5e-22 110.5 89 66.3
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 4.4e-22 109.0 70 75.7
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 7.4e-22 108.2 120 53.3
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 6.3e-21 105.1 143 46.9
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 4.1e-20 102.4 69 73.9
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.3e-18 97.4 121 49.6
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 3.8e-18 95.9 97 59.8
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.1e-17 94.4 99 59.6
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 3.2e-17 92.8 61 78.7
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 2.1e-16 90.1 62 74.2
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 2.4e-12 76.6 95 49.5
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 2.4e-12 76.6 69 62.3
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 5.3e-12 75.5 61 67.2
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 9.1e-12 74.7 93 50.5
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 1.2e-06 57.8 66 47.0
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 9.8e-06 54.7 38 73.7
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 9.8e-06 54.7 48 58.3


User provided reference genes

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