Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 1.2e-167 593.2 309 100.0
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 3.7e-89 332.4 265 74.3
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 6.9e-88 328.2 293 67.9
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 1.2e-87 327.4 290 68.3
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 2.6e-87 326.2 269 71.0
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 5.9e-87 325.1 270 70.0
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 1.7e-86 323.6 292 67.1
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 2.2e-86 323.2 221 79.6
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 2.2e-86 323.2 300 63.0
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 1.4e-85 320.5 295 66.8
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 5.5e-85 318.5 293 68.3
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 5.5e-85 318.5 296 64.2
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 7.2e-85 318.2 294 65.0
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.6e-84 317.0 296 63.9
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 6.1e-84 315.1 295 65.1
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 2.3e-83 313.2 304 64.1
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 3.0e-83 312.8 295 66.8
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 5.1e-83 312.0 289 65.4
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 1.1e-82 310.8 289 64.7
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 2.0e-82 310.1 291 63.2
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 3.3e-82 309.3 289 64.7
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 3.3e-82 309.3 289 64.7
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 7.4e-82 308.1 292 64.4
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 1.3e-81 307.4 266 66.9
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 1.7e-81 307.0 266 67.3
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 1.7e-81 307.0 291 65.6
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 2.2e-81 306.6 296 64.9
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 2.2e-81 306.6 289 66.1
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 2.8e-81 306.2 290 65.9
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 2.8e-81 306.2 290 65.2
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 2.8e-81 306.2 290 63.8
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 3.7e-81 305.8 290 65.9
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 4.8e-81 305.4 295 65.8
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 6.3e-81 305.1 268 67.5
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 8.2e-81 304.7 289 64.0
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 1.1e-80 304.3 295 63.4
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 1.4e-80 303.9 291 64.9
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 1.4e-80 303.9 296 63.2
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 5.3e-80 302.0 302 61.9
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 6.9e-80 301.6 271 64.6
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 6.9e-80 301.6 291 63.6
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 9.1e-80 301.2 290 64.5
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 1.2e-79 300.8 266 68.4
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 1.5e-79 300.4 289 64.0
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 2.0e-79 300.1 291 63.9
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 2.6e-79 299.7 264 65.2
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 3.4e-79 299.3 268 66.0
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 3.4e-79 299.3 267 66.7
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 4.5e-79 298.9 271 65.3
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 4.5e-79 298.9 296 64.2
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 5.9e-79 298.5 290 64.1
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 5.9e-79 298.5 297 65.0
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 5.9e-79 298.5 290 62.4
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 7.7e-79 298.1 303 59.7
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 1.0e-78 297.7 268 63.4
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 2.2e-78 296.6 290 64.1
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 2.2e-78 296.6 296 62.8
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 2.9e-78 296.2 291 61.9
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 3.8e-78 295.8 289 61.6
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 5.0e-78 295.4 248 69.0
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 5.0e-78 295.4 292 61.6
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 6.5e-78 295.0 265 66.0
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.4e-77 293.9 289 61.6
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 1.9e-77 293.5 264 64.4
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 3.2e-77 292.7 293 61.1
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 7.2e-77 291.6 266 63.5
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 7.2e-77 291.6 266 64.3
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 9.4e-77 291.2 265 63.8
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 2.1e-76 290.0 266 64.7
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 3.6e-76 289.3 264 65.5
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 6.1e-76 288.5 289 61.6
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 7.9e-76 288.1 275 62.2
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 7.9e-76 288.1 209 77.0
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 1.0e-75 287.7 267 65.2
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 1.4e-75 287.3 282 63.1
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.4e-75 287.3 268 65.7
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 1.4e-75 287.3 269 63.9
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 1.8e-75 287.0 347 56.2
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 2.3e-75 286.6 292 60.3
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 3.0e-75 286.2 170 84.7
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 3.9e-75 285.8 273 62.3
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 6.7e-75 285.0 274 61.7
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 6.7e-75 285.0 266 63.2
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 6.7e-75 285.0 268 63.8
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 8.8e-75 284.6 291 61.2
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 1.5e-74 283.9 261 64.0
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 1.5e-74 283.9 294 60.2
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 1.5e-74 283.9 289 61.2
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 2.0e-74 283.5 230 68.3
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 2.0e-74 283.5 357 52.9
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 2.6e-74 283.1 267 61.8
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 3.3e-74 282.7 251 64.1
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 3.3e-74 282.7 251 64.1
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 3.3e-74 282.7 290 61.0
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 4.4e-74 282.3 290 59.7
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 7.4e-74 281.6 292 58.9
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 9.7e-74 281.2 209 72.7
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 1.3e-73 280.8 265 60.0
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.3e-73 280.8 265 60.8
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 1.3e-73 280.8 296 59.5
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.2e-73 280.0 280 63.2
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 2.8e-73 279.6 286 60.5
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 3.7e-73 279.3 224 70.5
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 4.8e-73 278.9 268 62.7
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 4.8e-73 278.9 269 61.7
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 6.3e-73 278.5 208 72.6
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 8.2e-73 278.1 267 62.2
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 1.4e-72 277.3 249 63.5
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.8e-72 276.9 264 61.7
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 4.1e-72 275.8 264 59.8
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 4.1e-72 275.8 269 61.3
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 7.0e-72 275.0 264 59.8
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 7.0e-72 275.0 272 60.7
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 7.0e-72 275.0 267 62.2
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 1.6e-71 273.9 172 82.6
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 2.0e-71 273.5 293 59.4
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 2.6e-71 273.1 270 61.1
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 2.6e-71 273.1 269 61.0
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 7.7e-71 271.6 269 60.6
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 3.8e-70 269.2 311 55.0
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 5.0e-70 268.9 315 54.9
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 6.5e-70 268.5 160 83.8
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 1.9e-69 266.9 260 61.2
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 7.2e-69 265.0 157 83.4
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 2.1e-68 263.5 154 85.7
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 2.7e-68 263.1 179 74.3
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 8.0e-68 261.5 269 59.9
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 2.3e-67 260.0 266 57.1
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 4.8e-65 252.3 186 72.6
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 1.6e-63 247.3 155 81.3
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 2.7e-63 246.5 174 73.0
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 2.7e-63 246.5 281 53.4
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 2.2e-62 243.4 224 63.8
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 2.9e-62 243.0 165 73.3
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 3.2e-61 239.6 250 56.0
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 4.2e-61 239.2 161 75.2
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 1.2e-60 237.7 199 62.3
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 1.6e-60 237.3 201 65.2
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 8.0e-60 235.0 326 47.5
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 8.0e-60 235.0 152 77.6
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 8.8e-59 231.5 243 55.1
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 7.5e-58 228.4 201 61.2
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 2.4e-56 223.4 207 59.4
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 7.5e-50 201.8 282 48.6
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 5.9e-47 192.2 218 54.6
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 8.6e-46 188.3 157 59.9
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 2.5e-45 186.8 217 52.1
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 4.9e-41 172.6 159 60.4
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 8.0e-36 155.2 156 57.7
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 3.7e-33 146.4 89 77.5
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 5.4e-32 142.5 118 66.1
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 1.2e-31 141.4 243 42.0
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.1e-27 128.3 95 76.8
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 2.9e-25 120.2 251 35.1
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 3.5e-23 113.2 110 54.5
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 1.0e-22 111.7 218 37.2
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 8.6e-22 108.6 63 84.1
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 2.5e-21 107.1 63 82.5
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 1.2e-20 104.8 87 59.8
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 5.2e-19 99.4 180 39.4
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 5.2e-11 72.8 42 83.3
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 1.1e-08 65.1 174 30.5
VMungo0251G3374 Vigna mungo HOM05D004451 ORTHO05D005177 3.2e-08 63.5 86 48.8
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 7.1e-08 62.4 65 61.5


User provided reference genes

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