Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.4e-189 663.7 329 100.0
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.1e-155 550.4 311 89.4
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.3e-153 545.8 311 88.4
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.0e-153 544.7 311 89.1
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-152 543.1 311 88.1
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.8e-150 534.3 338 82.0
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-137 493.4 298 85.2
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 2.7e-122 442.6 320 70.9
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 8.9e-118 427.6 334 67.4
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.7e-116 423.3 334 67.1
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 3.8e-116 422.2 317 70.0
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.1e-115 420.6 333 67.9
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 3.2e-115 419.1 322 68.6
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 1.2e-114 417.2 314 69.7
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 1.6e-114 416.8 326 69.0
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 6.0e-114 414.8 322 68.0
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 7.8e-114 414.5 322 67.7
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 2.3e-113 412.9 328 67.1
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 2.5e-112 409.5 314 67.8
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 9.6e-112 407.5 317 67.8
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 1.6e-111 406.8 329 67.8
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 1.6e-111 406.8 322 66.8
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 2.8e-111 406.0 329 67.2
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 4.7e-111 405.2 322 66.1
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 6.2e-111 404.8 313 67.4
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 3.1e-110 402.5 326 67.5
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 2.6e-109 399.4 315 66.3
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 5.8e-109 398.3 341 62.8
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 9.9e-109 397.5 317 68.1
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 4.9e-108 395.2 315 64.1
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 8.4e-108 394.4 315 64.1
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 2.4e-107 392.9 324 63.3
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 3.2e-107 392.5 324 63.9
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 4.2e-107 392.1 323 64.4
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 7.1e-107 391.3 318 65.1
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 9.3e-107 391.0 323 64.1
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 2.1e-106 389.8 317 64.7
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-106 389.8 246 82.1
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.1e-106 389.8 318 63.5
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.3e-105 386.3 326 62.9
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 2.3e-105 386.3 325 63.1
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 2.5e-104 382.9 288 71.2
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 5.6e-104 381.7 326 63.8
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 1.6e-103 380.2 309 64.4
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.8e-103 378.6 329 61.4
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.8e-102 376.7 307 63.8
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 2.4e-102 376.3 334 62.6
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 2.4e-102 376.3 324 61.1
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.5e-101 373.6 316 63.0
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 7.6e-101 371.3 318 62.9
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 9.9e-101 370.9 328 58.8
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 5.4e-99 365.2 302 64.2
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 1.2e-98 364.0 320 61.6
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 2.1e-98 363.2 300 65.0
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 3.5e-98 362.5 312 61.9
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 8.7e-97 357.8 369 54.5
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.5e-96 356.3 291 64.9
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.3e-96 355.9 311 65.9
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 5.6e-96 355.1 291 64.9
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 7.4e-96 354.8 335 59.4
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 2.1e-95 353.2 320 60.3
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 8.1e-95 351.3 291 64.6
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 8.1e-95 351.3 324 57.7
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.4e-94 350.5 313 62.0
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.4e-94 349.7 291 63.6
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.8e-93 345.1 311 62.7
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.7e-92 343.6 319 59.6
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-91 340.5 311 62.4
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 3.2e-91 339.3 333 56.8
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 4.3e-88 328.9 312 58.0
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 7.4e-88 328.2 359 54.3
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-87 327.0 217 80.6
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.1e-86 324.3 315 56.8
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 2.4e-86 323.2 288 62.5
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 4.5e-85 318.9 267 62.9
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 4.5e-85 318.9 279 60.2
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 4.9e-84 315.5 275 61.5
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-82 310.5 291 61.5
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 2.7e-82 309.7 268 63.1
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.0e-81 306.2 188 81.9
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 3.9e-81 305.8 316 54.7
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.3e-79 298.5 330 50.9
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 5.9e-77 292.0 209 70.3
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 7.2e-75 285.0 315 51.7
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 7.2e-75 285.0 223 66.4
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 7.2e-75 285.0 297 54.5
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.9e-73 279.3 177 79.7
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 9.1e-70 268.1 212 66.0
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.2e-69 267.7 326 49.7
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 5.9e-69 265.4 312 51.6
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 1.0e-65 254.6 312 46.5
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 1.5e-61 240.7 215 61.4
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 6.1e-58 228.8 268 50.7
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 7.2e-51 205.3 163 66.3
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 6.7e-49 198.7 361 36.0
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 4.4e-48 196.1 177 61.0
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.9e-43 180.6 263 42.6
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.9e-43 180.6 170 60.6
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 7.5e-40 168.7 172 54.7
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 9.1e-38 161.8 256 37.5
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 7.7e-37 158.7 128 64.8
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.4e-33 147.9 271 35.8
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 7.5e-32 142.1 139 55.4
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 9.2e-30 135.2 246 35.8
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 3.9e-20 103.2 93 59.1
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 3.6e-18 96.7 69 66.7
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 3.1e-17 93.6 94 55.3
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 5.2e-17 92.8 78 60.3
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 4.4e-08 63.2 88 38.6
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.3e-07 61.6 41 65.9


User provided reference genes

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