Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.3e-105 385.6 191 100.0
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 3.9e-81 305.1 158 96.8
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 5.1e-65 251.5 137 89.8
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.3e-63 246.9 131 91.6
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.8e-63 245.7 131 90.8
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 2.8e-63 245.7 131 90.8
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 1.4e-62 243.4 156 77.6
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 1.2e-61 240.4 133 87.2
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 5.8e-61 238.0 140 82.9
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 7.6e-61 237.7 132 85.6
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 9.9e-61 237.3 160 76.2
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.3e-60 236.9 140 82.1
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 2.2e-60 236.1 138 83.3
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 3.8e-60 235.3 138 81.2
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 3.8e-60 235.3 137 84.7
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 8.4e-60 234.2 138 83.3
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 1.1e-59 233.8 133 85.0
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 1.1e-59 233.8 133 85.0
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 2.4e-59 232.6 127 89.8
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 9.3e-59 230.7 162 71.6
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 9.3e-59 230.7 179 66.5
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 2.1e-58 229.6 138 79.7
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 2.1e-58 229.6 140 81.4
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.1e-58 229.6 140 81.4
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.1e-58 229.6 140 81.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 2.7e-58 229.2 139 81.3
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 4.6e-58 228.4 124 87.9
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 6.0e-58 228.0 124 87.1
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 6.0e-58 228.0 151 76.2
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 6.0e-58 228.0 151 76.2
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 7.9e-58 227.6 127 86.6
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 1.0e-57 227.3 142 81.0
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 1.8e-57 226.5 124 86.3
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 2.3e-57 226.1 124 84.7
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 2.3e-57 226.1 139 77.7
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 2.3e-57 226.1 124 84.7
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 2.3e-57 226.1 124 85.5
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 3.9e-57 225.3 134 79.9
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 5.1e-57 224.9 124 84.7
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 5.1e-57 224.9 127 84.3
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 5.1e-57 224.9 138 78.3
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 6.7e-57 224.6 152 73.7
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 8.7e-57 224.2 138 78.3
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 1.9e-56 223.0 149 73.8
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 7.4e-56 221.1 146 75.3
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 2.1e-55 219.5 132 79.5
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 2.1e-55 219.5 145 75.2
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 2.8e-55 219.2 124 83.1
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 2.8e-55 219.2 145 75.2
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 3.7e-55 218.8 134 79.9
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 3.7e-55 218.8 131 80.9
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 6.2e-55 218.0 138 77.5
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 6.2e-55 218.0 143 75.5
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 8.1e-55 217.6 124 83.1
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 8.1e-55 217.6 127 83.5
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 8.1e-55 217.6 132 80.3
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 8.1e-55 217.6 124 85.5
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.1e-54 217.2 124 83.9
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.4e-54 216.1 155 71.6
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 2.4e-54 216.1 132 78.8
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 2.4e-54 216.1 138 76.8
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 3.1e-54 215.7 127 83.5
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 3.1e-54 215.7 128 81.2
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 1.2e-53 213.8 132 77.3
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.2e-53 213.8 126 82.5
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 1.2e-53 213.8 139 76.3
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 2.0e-53 213.0 135 77.8
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 2.6e-53 212.6 132 78.8
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 2.6e-53 212.6 139 78.4
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 2.6e-53 212.6 124 82.3
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 3.4e-53 212.2 145 73.8
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 5.8e-53 211.5 124 82.3
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 2.2e-52 209.5 124 80.6
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 2.2e-52 209.5 139 74.8
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 2.2e-52 209.5 124 80.6
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 6.5e-52 208.0 124 80.6
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 2.5e-51 206.1 124 80.6
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 4.2e-51 205.3 124 79.0
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 4.2e-51 205.3 124 81.5
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 1.2e-50 203.8 124 80.6
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 1.2e-50 203.8 124 80.6
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 6.0e-50 201.4 128 77.3
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 2.5e-48 196.1 135 74.1
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 9.6e-48 194.1 124 75.0
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 1.4e-46 190.3 124 73.4
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 2.4e-46 189.5 131 72.5
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 2.4e-46 189.5 131 72.5
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 5.3e-46 188.3 131 69.5
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.0e-44 184.1 124 70.2
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 1.3e-44 183.7 124 71.0
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 1.7e-44 183.3 124 76.6
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 6.5e-44 181.4 124 69.4
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 2.5e-43 179.5 118 72.9
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 1.3e-39 167.2 124 70.2
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.1e-38 164.1 124 70.2
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 1.6e-34 150.2 150 60.0
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 4.4e-32 142.1 79 81.0
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 8.2e-31 137.9 126 59.5
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 2.4e-30 136.3 148 53.4
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.2e-29 134.0 82 73.2
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.4e-27 127.1 124 56.5
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 3.6e-26 122.5 125 50.4
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 7.9e-26 121.3 73 75.3
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 3.0e-25 119.4 122 51.6
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 4.4e-24 115.5 144 41.7
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 4.8e-23 112.1 58 87.9
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 3.1e-22 109.4 134 46.3
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 4.1e-22 109.0 158 44.3
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 7.7e-21 104.8 57 80.7
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-20 103.2 64 70.3
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 2.1e-18 96.7 135 45.2
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.3e-15 87.4 79 62.0
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 8.0e-10 68.2 42 76.2


User provided reference genes

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