Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.3e-60 236.1 116 100.0
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 3.0e-44 181.8 113 79.6
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 9.7e-43 176.8 113 77.9
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 3.7e-42 174.9 113 75.2
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 4.8e-42 174.5 114 72.8
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 6.3e-42 174.1 113 74.3
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 8.2e-42 173.7 111 75.7
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 8.2e-42 173.7 104 83.7
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.1e-41 173.3 115 76.5
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 2.4e-41 172.2 100 83.0
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.4e-41 172.2 111 74.8
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 3.1e-41 171.8 113 77.9
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 5.3e-41 171.0 109 80.7
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 5.3e-41 171.0 108 78.7
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.5e-40 169.5 91 89.0
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.5e-40 169.5 115 73.9
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 2.0e-40 169.1 115 73.0
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.6e-40 168.7 113 75.2
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 2.6e-40 168.7 113 74.3
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 2.6e-40 168.7 104 81.7
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 3.4e-40 168.3 114 76.3
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 4.5e-40 167.9 93 86.0
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 7.7e-40 167.2 116 70.7
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 7.7e-40 167.2 116 70.7
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 7.7e-40 167.2 99 78.8
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 7.7e-40 167.2 115 73.9
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 7.7e-40 167.2 112 75.0
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.3e-39 166.4 115 73.0
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.3e-39 166.4 111 75.7
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 2.9e-39 165.2 116 71.6
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 2.9e-39 165.2 103 76.7
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.9e-39 165.2 114 74.6
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 3.8e-39 164.9 112 76.8
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 3.8e-39 164.9 95 82.1
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 3.8e-39 164.9 99 77.8
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.8e-39 164.9 112 75.9
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 3.8e-39 164.9 120 70.0
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 3.8e-39 164.9 100 82.0
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 5.0e-39 164.5 111 73.0
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 8.5e-39 163.7 103 79.6
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 8.5e-39 163.7 114 71.9
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 1.1e-38 163.3 113 69.9
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 1.1e-38 163.3 113 69.9
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.1e-38 163.3 95 82.1
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.9e-38 162.5 87 87.4
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.9e-38 162.5 105 76.2
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 2.5e-38 162.2 95 81.1
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 2.5e-38 162.2 95 81.1
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 2.5e-38 162.2 95 81.1
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.5e-38 162.2 108 75.0
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 2.5e-38 162.2 110 72.7
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 2.5e-38 162.2 100 80.0
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 3.2e-38 161.8 100 79.0
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 4.2e-38 161.4 113 69.9
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 4.2e-38 161.4 95 81.1
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 4.2e-38 161.4 95 81.1
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 4.2e-38 161.4 114 70.2
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 5.5e-38 161.0 115 68.7
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 5.5e-38 161.0 117 72.6
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 7.2e-38 160.6 92 82.6
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 7.2e-38 160.6 116 70.7
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.2e-37 159.8 116 69.8
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.2e-37 159.8 108 75.0
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.6e-37 159.5 116 69.8
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 2.1e-37 159.1 113 69.0
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 3.6e-37 158.3 102 74.5
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 3.6e-37 158.3 100 76.0
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 4.7e-37 157.9 114 67.5
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 4.7e-37 157.9 108 72.2
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.9e-37 157.1 120 65.8
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.0e-36 156.8 94 77.7
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 1.4e-36 156.4 103 73.8
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 2.3e-36 155.6 115 67.0
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 2.6e-35 152.1 94 77.7
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 3.3e-35 151.8 90 78.9
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 9.7e-35 150.2 103 72.8
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.7e-34 149.4 91 75.8
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 1.7e-34 149.4 98 70.4
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 3.7e-34 148.3 93 73.1
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 3.7e-34 148.3 112 64.3
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 3.7e-34 148.3 76 90.8
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 4.8e-34 147.9 112 65.2
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 1.1e-33 146.7 90 76.7
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 4.1e-33 144.8 78 84.6
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 9.1e-33 143.7 118 64.4
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.5e-32 142.9 117 67.5
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 1.5e-32 142.9 77 85.7
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 5.9e-32 141.0 76 86.8
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 5.9e-32 141.0 111 62.2
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.0e-31 140.2 85 74.1
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 3.8e-31 138.3 117 60.7
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 3.8e-31 138.3 92 69.6
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 5.5e-30 134.4 94 72.3
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 7.2e-30 134.0 79 77.2
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 9.4e-30 133.7 101 68.3
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.2e-29 133.3 77 81.8
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.2e-29 133.3 94 68.1
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.2e-29 133.3 92 67.4
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 8.0e-29 130.6 76 82.9
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 2.9e-23 112.1 97 57.7
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 6.5e-23 110.9 100 52.0
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 1.1e-22 110.2 109 50.5
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 6.8e-20 100.9 88 54.5
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 2.8e-18 95.5 76 57.9
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 6.3e-18 94.4 55 81.8
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.2e-15 85.9 134 38.8
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 3.2e-14 82.0 111 42.3


User provided reference genes

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