Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.8e-61 239.2 131 100.0
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.7e-57 225.3 131 93.1
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.0e-56 223.4 131 91.6
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.7e-56 222.6 131 92.4
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.3e-56 222.2 131 91.6
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.9e-56 221.5 130 92.3
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 5.1e-56 221.1 131 90.8
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 8.6e-56 220.3 131 90.8
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.1e-55 219.9 131 90.1
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.9e-55 219.2 131 90.8
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 2.5e-55 218.8 130 90.0
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.5e-55 218.8 130 91.5
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 91.6
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 90.8
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 3.3e-55 218.4 127 92.9
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 4.3e-55 218.0 127 92.1
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 4.3e-55 218.0 131 90.1
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 4.3e-55 218.0 130 91.5
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 87.8
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 89.3
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.3e-55 217.2 130 90.8
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 7.3e-55 217.2 130 90.8
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 7.3e-55 217.2 129 89.9
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 7.3e-55 217.2 131 88.5
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 9.5e-55 216.9 131 88.5
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 9.5e-55 216.9 131 88.5
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 9.5e-55 216.9 129 90.7
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 1.2e-54 216.5 129 89.1
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 1.6e-54 216.1 131 89.3
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.6e-54 216.1 131 91.6
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 1.6e-54 216.1 129 89.1
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 2.8e-54 215.3 131 87.8
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 2.8e-54 215.3 131 85.5
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 86.3
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 3.6e-54 214.9 129 89.1
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.6e-54 214.9 130 90.8
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 3.6e-54 214.9 129 88.4
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 4.7e-54 214.5 127 89.8
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 4.7e-54 214.5 127 89.8
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 4.7e-54 214.5 129 89.1
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 8.1e-54 213.8 129 88.4
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.1e-53 213.4 127 90.6
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 84.7
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.4e-53 213.0 130 90.0
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 1.4e-53 213.0 131 87.8
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 1.8e-53 212.6 127 89.0
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.3e-53 212.2 131 87.8
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 2.3e-53 212.2 128 88.3
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 85.5
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 86.0
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 4.0e-53 211.5 131 86.3
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 86.3
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.9e-53 210.3 130 86.9
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 8.9e-53 210.3 131 86.3
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 1.2e-52 209.9 131 86.3
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 1.2e-52 209.9 126 88.9
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 2.0e-52 209.1 138 84.1
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 2.6e-52 208.8 130 86.2
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 2.6e-52 208.8 127 87.4
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.4e-52 208.4 131 85.5
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.4e-52 208.0 130 88.5
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 5.8e-52 207.6 125 88.0
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 1.7e-51 206.1 130 83.8
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 83.2
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 83.2
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 83.2
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 2.9e-51 205.3 130 83.8
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 2.9e-51 205.3 130 83.8
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 4.9e-51 204.5 140 81.4
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 6.4e-51 204.1 131 84.0
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 8.4e-51 203.8 131 82.4
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 8.4e-51 203.8 131 82.4
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 1.9e-50 202.6 130 85.4
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.7e-49 198.7 129 80.6
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 79.4
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.6e-49 198.0 129 80.6
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 4.6e-49 198.0 113 91.2
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 7.8e-49 197.2 131 81.7
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.3e-48 195.7 130 82.3
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 3.9e-48 194.9 186 64.0
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.9e-47 192.6 113 89.4
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.3e-47 191.8 144 75.0
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 7.3e-47 190.7 111 88.3
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.2e-46 189.9 134 79.9
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.6e-46 189.5 121 86.8
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 2.1e-46 189.1 122 83.6
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 2.1e-46 189.1 110 91.8
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 1.4e-45 186.4 113 86.7
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.4e-45 186.4 121 85.1
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 4.0e-45 184.9 105 95.2
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 8.9e-45 183.7 129 75.2
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.2e-44 183.3 106 91.5
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.2e-44 183.3 104 95.2
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 2.0e-44 182.6 124 75.0
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 4.4e-44 181.4 111 82.9
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 5.8e-44 181.0 118 83.1
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 5.8e-44 181.0 107 87.9
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 1.3e-43 179.9 108 87.0
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 3.8e-43 178.3 121 82.6
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 4.9e-43 177.9 113 82.3
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.1e-42 176.8 111 81.1
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 1.9e-42 176.0 105 89.5
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 9.3e-42 173.7 128 75.8
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 4.6e-41 171.4 119 78.2
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.3e-40 169.1 131 73.3
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 3.9e-40 168.3 133 72.2
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.9e-40 168.3 105 83.8
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 3.9e-40 168.3 125 68.8
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 1.9e-39 166.0 107 81.3
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 4.3e-39 164.9 92 93.5
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 2.1e-38 162.5 92 91.3
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 3.6e-38 161.8 160 58.8
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 6.2e-38 161.0 119 74.8
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 6.2e-38 161.0 92 89.1
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.1e-37 160.2 91 91.2
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 2.4e-37 159.1 87 94.3
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 5.3e-37 157.9 126 65.1
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 6.9e-37 157.5 131 61.8
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 6.9e-37 157.5 124 69.4
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 1.2e-36 156.8 87 93.1
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 1.5e-36 156.4 92 90.2
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 9.9e-36 153.7 117 73.5
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 1.3e-35 153.3 92 83.7
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 4.9e-35 151.4 131 70.2
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.4e-34 149.8 84 89.3
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.9e-34 149.4 87 93.1
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 5.4e-34 147.9 92 81.5
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.2e-33 146.7 95 78.9
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 2.1e-33 146.0 110 65.5
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 3.5e-33 145.2 88 87.5
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 9.6e-31 137.1 95 82.1
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 9.6e-31 137.1 102 74.5
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 9.6e-31 137.1 90 78.9
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 2.9e-27 125.6 71 90.1
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.1e-26 123.6 92 73.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 2.4e-26 122.5 92 73.9
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.1e-25 119.4 70 88.6
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 1.1e-23 113.6 202 43.1
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 4.3e-23 111.7 63 90.5
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.7e-22 108.6 61 90.2
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 4.8e-22 108.2 111 59.5
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 1.2e-20 103.6 125 45.6
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.0e-19 100.5 125 44.0
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 3.2e-18 95.5 67 70.1
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 7.1e-18 94.4 64 71.9
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 2.1e-17 92.8 64 70.3
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 6.0e-17 91.3 78 60.3
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 1.3e-16 90.1 66 68.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.8e-16 89.7 64 70.3
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.9e-15 86.3 64 67.2
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 9.6e-15 84.0 173 39.9
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.1e-13 80.5 112 41.1
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 8.4e-11 70.9 123 35.0
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 1.0e-08 63.9 124 37.9
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 2.3e-08 62.8 39 87.2


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