Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.1e-99 364.4 179 100.0
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.5e-95 352.8 179 96.6
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-53 213.0 180 64.4
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-51 206.1 182 64.3
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.3e-48 194.9 182 63.2
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.9e-48 194.5 179 63.7
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.9e-46 189.1 190 56.8
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 8.5e-46 187.6 176 59.1
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 1.1e-45 187.2 193 55.4
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.6e-44 183.3 190 55.8
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.3e-43 179.5 186 53.2
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 3.0e-43 179.1 184 56.0
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 3.9e-43 178.7 190 56.8
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 5.1e-43 178.3 186 52.7
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.0e-42 176.4 191 54.5
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 3.3e-42 175.6 191 53.9
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 4.3e-42 175.3 178 55.6
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 5.7e-42 174.9 186 54.3
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.4e-42 174.5 178 58.4
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.3e-41 173.7 189 51.9
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 2.8e-41 172.6 192 52.1
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 3.7e-41 172.2 176 54.5
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 6.3e-41 171.4 184 53.8
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.1e-40 168.7 158 62.7
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 4.1e-40 168.7 180 54.4
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.2e-39 167.2 192 51.0
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 2.6e-39 166.0 185 53.0
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 3.4e-39 165.6 184 51.1
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 3.4e-39 165.6 184 50.5
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 5.9e-39 164.9 194 52.6
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 7.7e-39 164.5 193 47.2
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.7e-38 163.3 172 53.5
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 1.7e-38 163.3 183 51.4
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.7e-38 163.3 181 48.6
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 2.2e-38 162.9 182 46.7
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 2.2e-38 162.9 191 51.8
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 2.2e-38 162.9 187 50.8
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 8.5e-38 161.0 196 51.0
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 1.4e-37 160.2 177 53.1
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.4e-37 160.2 184 50.0
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.5e-37 159.5 190 50.0
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 4.2e-37 158.7 169 53.8
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 4.2e-37 158.7 187 50.8
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.2e-36 157.1 169 54.4
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.2e-36 157.1 207 44.9
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.6e-36 156.8 178 53.4
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.7e-36 156.0 156 60.3
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 3.6e-36 155.6 192 50.5
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 3.6e-36 155.6 185 49.2
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.7e-36 155.2 186 48.9
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.9e-36 154.5 108 67.6
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 7.9e-36 154.5 190 47.4
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 7.9e-36 154.5 189 48.7
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 1.8e-35 153.3 172 49.4
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 3.0e-35 152.5 190 47.9
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 3.0e-35 152.5 168 54.2
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 3.9e-35 152.1 168 50.0
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 8.8e-35 151.0 197 48.7
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 8.8e-35 151.0 193 45.6
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 8.8e-35 151.0 182 48.4
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 1.5e-34 150.2 184 46.7
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 2.0e-34 149.8 163 50.9
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 2.6e-34 149.4 184 47.8
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 2.6e-34 149.4 189 48.1
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 3.3e-34 149.1 192 46.9
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 7.4e-34 147.9 163 49.7
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 9.7e-34 147.5 171 49.7
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 1.3e-33 147.1 176 48.3
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 1.3e-33 147.1 165 52.1
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 1.3e-33 147.1 195 44.6
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.7e-33 146.7 204 47.1
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.7e-33 146.7 185 46.5
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.7e-33 146.7 173 49.1
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 2.2e-33 146.4 170 48.8
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.3e-33 144.8 188 46.8
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 6.3e-33 144.8 184 47.8
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 1.4e-32 143.7 182 47.3
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.4e-32 143.7 164 49.4
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.4e-32 143.7 196 44.4
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 3.1e-32 142.5 178 48.3
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.1e-32 142.1 182 45.1
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 4.1e-32 142.1 175 45.7
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 5.3e-32 141.7 171 52.6
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 7.0e-32 141.4 185 46.5
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.2e-31 140.6 199 44.2
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 2.0e-31 139.8 170 45.9
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.6e-31 139.4 200 45.0
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 3.5e-31 139.0 184 46.7
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 4.5e-31 138.7 169 52.7
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.0e-30 137.5 211 44.5
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.0e-30 137.5 191 46.1
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.3e-30 137.1 186 45.7
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 2.9e-30 136.0 195 44.1
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 5.0e-30 135.2 189 45.0
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 5.0e-30 135.2 183 45.9
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 6.5e-30 134.8 218 42.2
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 8.5e-30 134.4 182 46.2
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 1.1e-29 134.0 201 46.3
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.1e-29 134.0 201 46.3
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.1e-29 134.0 204 46.1
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.1e-29 134.0 201 46.3
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 2.5e-29 132.9 175 45.7
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 3.2e-29 132.5 180 47.2
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 5.5e-29 131.7 186 45.7
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 4.7e-28 128.6 182 46.2
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 8.0e-28 127.9 186 44.6
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.0e-28 127.9 175 42.3
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 8.0e-28 127.9 176 43.2
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 2.3e-27 126.3 175 45.1
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 2.3e-27 126.3 186 44.1
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 2.3e-27 126.3 186 44.1
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 3.0e-27 125.9 185 43.8
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 3.9e-27 125.6 186 44.1
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.1e-26 124.0 185 44.3
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.5e-26 123.6 178 45.5
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 5.7e-26 121.7 170 46.5
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.3e-25 120.6 185 44.3
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 2.2e-25 119.8 176 44.3
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 2.8e-25 119.4 176 43.8
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 2.8e-25 119.4 164 47.0
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 4.1e-24 115.5 180 43.9
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 5.3e-24 115.2 177 44.6
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 7.0e-24 114.8 176 43.8
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 7.0e-24 114.8 176 43.8
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.0e-24 114.8 178 42.7
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 7.0e-24 114.8 184 41.3
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 1.2e-23 114.0 177 43.5
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 1.2e-23 114.0 177 43.5
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.2e-23 114.0 175 45.1
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.6e-23 113.6 182 44.0
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 2.6e-23 112.8 176 41.5
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 2.6e-23 112.8 181 43.6
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 4.5e-23 112.1 176 39.8
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.5e-23 112.1 170 44.1
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 4.5e-23 112.1 163 42.3
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 5.9e-23 111.7 130 45.4
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.3e-22 110.5 176 40.9
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 2.2e-22 109.8 176 42.0
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 2.2e-22 109.8 176 42.0
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 2.2e-22 109.8 181 43.1
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 2.2e-22 109.8 176 42.0
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 3.8e-22 109.0 182 43.4
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 3.8e-22 109.0 182 41.8
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 5.0e-22 108.6 187 39.6
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.5e-21 107.1 176 41.5
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 2.1e-20 103.2 179 39.7
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 2.7e-20 102.8 187 39.6
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 4.0e-19 99.0 167 40.1
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.8e-19 98.2 123 47.2
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 2.0e-18 96.7 160 41.9
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 4.4e-18 95.5 179 35.2
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 5.7e-18 95.1 204 35.3
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 2.2e-17 93.2 207 34.8
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 3.7e-17 92.4 160 40.0
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.4e-16 89.7 141 41.1
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.5e-15 85.5 94 52.1
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.3e-14 84.0 108 48.1
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 3.8e-14 82.4 215 34.0
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 6.5e-14 81.6 104 47.1
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.5e-13 80.5 164 35.4
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 1.5e-13 80.5 165 38.2
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-13 80.1 145 41.4
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 3.2e-13 79.3 164 36.0
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 1.0e-11 74.3 166 38.6
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 1.0e-11 74.3 206 33.0
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 2.3e-11 73.2 128 37.5
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 5.2e-11 72.0 120 39.2
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.5e-10 70.5 165 33.3
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 9.8e-10 67.8 195 30.8
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 2.8e-09 66.2 215 28.4
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.3e-09 64.7 72 51.4
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 8.3e-09 64.7 128 36.7
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 3.1e-08 62.8 65 46.2
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 5.4e-08 62.0 206 28.2
ATR0580G176 Amborella trichopoda HOM05D003790 ORTHO05D004481 7.0e-08 61.6 179 29.1
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 7.0e-08 61.6 168 28.0
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 3.5e-07 59.3 167 28.7
Nn2g14986 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.0e-06 57.8 53 50.9
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.0e-06 57.8 160 30.0
SEGI_22892 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 3.8e-06 55.8 187 28.9
MBI07_g42010_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 8.6e-06 54.7 200 27.0


User provided reference genes

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