Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02291 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.7e-99 365.9 179 100.0
Eucgr.E02911 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.3e-49 200.3 185 63.2
Eucgr.E02232 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.0e-46 190.7 184 61.4
Eucgr.E02171 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.2e-46 189.5 184 61.4
Eucgr.E02915 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.7e-41 173.3 165 60.6
GSVIVG01010856001 Vitis vinifera HOM05D003832 ORTHO05D004365 1.7e-41 173.3 174 57.5
Eucgr.E02201 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.5e-39 166.8 184 55.4
Ciclev10009594m.g Citrus clementina HOM05D003832 ORTHO05D004365 2.6e-39 166.0 168 55.4
Lj4g0009154 Lotus japonicus HOM05D003832 ORTHO05D004365 4.5e-39 165.2 168 54.8
Dinv41177 Davidia involucrata HOM05D003832 ORTHO05D004365 1.0e-38 164.1 168 54.2
Manes.02G069300 Manihot esculenta HOM05D003832 ORTHO05D004365 1.0e-38 164.1 170 53.5
Atru.chr12.1654 Acer truncatum HOM05D003832 ORTHO05D004365 2.9e-38 162.5 173 54.9
Nn3g18876 Nelumbo nucifera HOM05D003832 ORTHO05D004365 2.9e-38 162.5 168 54.2
CANSAT80G0863 Cannabis sativa HOM05D003832 ORTHO05D004365 6.5e-38 161.4 180 50.6
ClCG06G013620 Citrullus lanatus HOM05D003832 ORTHO05D004365 6.5e-38 161.4 166 53.0
MELO3C017427.2 Cucumis melo HOM05D003832 ORTHO05D004365 6.5e-38 161.4 168 53.0
CsaV3_1G031890 Cucumis sativus L. HOM05D003832 ORTHO05D004365 8.5e-38 161.0 168 52.4
Potri.006G075300 Populus trichocarpa HOM05D003832 ORTHO05D004365 8.5e-38 161.0 169 55.0
TWI63G0052 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 1.1e-37 160.6 168 53.6
MSTRG.10440 Avicennia marina HOM05D003832 ORTHO05D004365 1.4e-37 160.2 174 52.3
CANSAT80G1489 Cannabis sativa HOM05D003832 ORTHO05D004365 1.4e-37 160.2 180 49.4
FvH4_5g15360 Fragaria vesca HOM05D003832 ORTHO05D004365 1.4e-37 160.2 179 50.3
FAN18G2818 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.4e-37 160.2 179 50.3
COL.COLO4_07061 Corchorus olitorius HOM05D003832 ORTHO05D004365 3.2e-37 159.1 180 50.6
Hma1.2p1_1326F.1_g275840 Hydrangea macrophylla HOM05D003832 ORTHO05D004365 4.2e-37 158.7 166 51.8
RcHm_v2.0_Chr4g0399541 Rosa chinensis HOM05D003832 ORTHO05D004365 4.2e-37 158.7 177 52.0
DCAR_018031 Daucus carota HOM05D003832 ORTHO05D004365 5.5e-37 158.3 180 48.9
Migut.L01881 Erythranthe guttata HOM05D003832 ORTHO05D004365 5.5e-37 158.3 174 51.7
Oeu005620.2 Olea europaea HOM05D003832 ORTHO05D004365 5.5e-37 158.3 167 53.9
FAN04G3185 Fragaria x ananassa HOM05D003832 ORTHO05D004365 7.2e-37 157.9 182 50.0
Phvul.003G141300 Phaseolus vulgaris HOM05D003832 ORTHO05D004365 7.2e-37 157.9 170 54.1
Lalb_Chr13g0300001 Lupinus albus HOM05D003832 ORTHO05D004365 9.4e-37 157.5 168 52.4
Sed0004806 Sechium edule HOM05D003832 ORTHO05D004365 9.4e-37 157.5 168 52.4
RcHm_v2.0_Chr7g0180711 Rosa chinensis HOM05D003832 ORTHO05D004365 1.2e-36 157.1 166 53.6
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 2.1e-36 156.4 167 52.1
Oeu064557.2 Olea europaea HOM05D003832 ORTHO05D004365 2.7e-36 156.0 167 53.3
SalBow5G5556 Salvia bowleyana HOM05D003832 ORTHO05D004365 2.7e-36 156.0 166 50.6
MD13G1241600 Malus domestica HOM05D003832 ORTHO05D004365 3.6e-36 155.6 168 51.8
FvH4_4g07280 Fragaria vesca HOM05D003832 ORTHO05D004365 4.7e-36 155.2 181 50.3
Medtr7g086830 Medicago truncatula HOM05D003832 ORTHO05D004365 6.1e-36 154.8 166 52.4
CiPaw.07G197200 Carya illinoinensis HOM05D003832 ORTHO05D004365 7.9e-36 154.5 168 53.0
HanXRQChr16g0514821 Helianthus annuus HOM05D003832 ORTHO05D004365 1.0e-35 154.1 175 48.6
THA.LOC104800261 Tarenaya hassleriana HOM05D003832 ORTHO05D004365 1.0e-35 154.1 168 51.2
RcHm_v2.0_Chr4g0399571 Rosa chinensis HOM05D003832 ORTHO05D004365 1.4e-35 153.7 166 53.0
FAN17G1929 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.8e-35 153.3 171 52.0
Zm00001eb054120 Zea mays HOM05D003832 ORTHO05D004365 1.8e-35 153.3 168 49.4
Psat3g085920 Pisum sativum HOM05D003832 ORTHO05D004365 2.3e-35 152.9 178 50.6
ATR0307G033 Amborella trichopoda HOM05D003832 ORTHO05D004365 3.0e-35 152.5 180 47.2
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 3.0e-35 152.5 166 50.0
SGA_v2.0_scaffold231G43408 Striga asiatica HOM05D003832 ORTHO05D004365 3.9e-35 152.1 170 49.4
Aa31LG3G7130 Aethionema arabicum HOM05D003832 ORTHO05D004365 5.1e-35 151.8 169 50.3
BolC8t47358H Brassica oleracea HOM05D003832 ORTHO05D004365 5.1e-35 151.8 166 50.0
CAN.G199.14 Capsicum annuum HOM05D003832 ORTHO05D004365 5.1e-35 151.8 169 50.9
Duzib170G0568 Durio zibethinus HOM05D003832 ORTHO05D004365 5.1e-35 151.8 168 50.0
Glyma.13G100600 Glycine max HOM05D003832 ORTHO05D004365 5.1e-35 151.8 170 52.9
Glyma.17G059300 Glycine max HOM05D003832 ORTHO05D004365 6.7e-35 151.4 170 53.5
Lsat_1_v5_gn_4_41160 Lactuca sativa HOM05D003832 ORTHO05D004365 8.8e-35 151.0 175 47.4
Sp1g35130 Schrenkiella parvula HOM05D003832 ORTHO05D004365 8.8e-35 151.0 166 50.6
Solyc07g008650.4 Solanum lycopersicum HOM05D003832 ORTHO05D004365 8.8e-35 151.0 177 48.0
BraA08t32534Z Brassica rapa HOM05D003832 ORTHO05D004365 1.1e-34 150.6 166 50.0
Gorai.012G114300 Gossypium raimondii HOM05D003832 ORTHO05D004365 1.1e-34 150.6 168 51.8
PSO801G0378 Papaver somniferum HOM05D003832 ORTHO05D004365 1.1e-34 150.6 177 50.8
Sopen07g004580 Solanum pennellii HOM05D003832 ORTHO05D004365 1.1e-34 150.6 169 49.7
A08p05010 Brassica napus HOM05D003832 ORTHO05D004365 1.5e-34 150.2 166 50.0
BraA08t32523Z Brassica rapa HOM05D003832 ORTHO05D004365 1.5e-34 150.2 166 50.0
TPR.G17987 Trifolium pratense HOM05D003832 ORTHO05D004365 1.5e-34 150.2 159 54.7
VMungo1215G0400 Vigna mungo HOM05D003832 ORTHO05D004365 1.5e-34 150.2 171 51.5
EL10Ac9g22760 Beta vulgaris HOM05D003832 ORTHO05D004365 2.6e-34 149.4 167 50.9
BcaC07g37168 Brassica carinata HOM05D003832 ORTHO05D004365 2.6e-34 149.4 166 49.4
A08p05170 Brassica napus HOM05D003832 ORTHO05D004365 2.6e-34 149.4 166 50.0
VMungo1127G0216 Vigna mungo HOM05D003832 ORTHO05D004365 2.6e-34 149.4 167 51.5
BcaB04g17461 Brassica carinata HOM05D003832 ORTHO05D004365 5.7e-34 148.3 166 49.4
C08p05410 Brassica napus HOM05D003832 ORTHO05D004365 5.7e-34 148.3 166 49.4
CDE04G0848 Ceratophyllum demersum HOM05D003832 ORTHO05D004365 5.7e-34 148.3 177 46.9
AUR62017542 Chenopodium quinoa HOM05D003832 ORTHO05D004365 5.7e-34 148.3 166 50.0
Ah.01g002120 Amaranthus hybridus HOM05D003832 ORTHO05D004365 7.4e-34 147.9 175 48.6
Prupe.1G075100 Prunus persica HOM05D003832 ORTHO05D004365 9.7e-34 147.5 168 50.0
HPP92_008659 Vanilla planifolia HOM05D003832 ORTHO05D004365 1.3e-33 147.1 169 47.9
Nitab4.5_0010556g0010 Nicotiana tabacum HOM05D003832 ORTHO05D004365 1.7e-33 146.7 179 48.6
Peaxi162Scf01038g00134 Petunia axillaris HOM05D003832 ORTHO05D004365 4.8e-33 145.2 165 50.9
AL1G54750 Arabidopsis lyrata HOM05D003832 ORTHO05D004365 6.3e-33 144.8 166 48.2
Sp7g33250 Schrenkiella parvula HOM05D003832 ORTHO05D004365 6.3e-33 144.8 166 49.4
AT1G48175 Arabidopsis thaliana HOM05D003832 ORTHO05D004365 1.1e-32 144.1 166 49.4
Thhalv10001035m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 1.4e-32 143.7 167 47.9
Ah.01g002650 Amaranthus hybridus HOM05D003832 ORTHO05D004365 1.8e-32 143.3 166 47.6
Nitab4.5_0000725g0040 Nicotiana tabacum HOM05D003832 ORTHO05D004365 2.4e-32 142.9 165 50.3
C06p02680 Brassica napus HOM05D003832 ORTHO05D004365 4.1e-32 142.1 166 47.6
ECA232G4969 Erigeron canadensis HOM05D003832 ORTHO05D004365 5.3e-32 141.7 174 46.6
Lsat_1_v5_gn_5_90120 Lactuca sativa HOM05D003832 ORTHO05D004365 5.3e-32 141.7 175 46.3
Sc20g0003900 Simmondsia chinensis HOM05D003832 ORTHO05D004365 5.3e-32 141.7 162 50.0
ECA234G0864 Erigeron canadensis HOM05D003832 ORTHO05D004365 7.0e-32 141.4 187 45.5
Nitab4.5_0000617g0240 Nicotiana tabacum HOM05D003832 ORTHO05D004365 9.1e-32 141.0 177 47.5
unitig_8.g4676 Utricularia gibba HOM05D003832 ORTHO05D004365 9.1e-32 141.0 183 46.4
Rhsim01G0116900 Rhododendron simsii HOM05D003832 ORTHO05D004365 2.0e-31 139.8 260 36.9
BcaC08g43013 Brassica carinata HOM05D003832 ORTHO05D004365 2.6e-31 139.4 166 47.6
Thhalv10012316m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 4.5e-31 138.7 161 50.9
TPR.G31075 Trifolium pratense HOM05D003832 ORTHO05D004365 4.5e-31 138.7 154 52.6
TWI34G0584 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 7.7e-31 137.9 161 50.3
Sabra06G0056000 Salix brachista HOM05D003832 ORTHO05D004365 3.8e-30 135.6 220 41.8
BcaB07g33785 Brassica carinata HOM05D003832 ORTHO05D004365 5.0e-30 135.2 167 47.9
Aqoxy2G00660 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 8.5e-30 134.4 179 44.1
Aqoxy3G00356 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 1.9e-29 133.3 168 44.6
BolC6t35394H Brassica oleracea HOM05D003832 ORTHO05D004365 2.5e-29 132.9 164 45.7
Eucgr.E02240 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.5e-29 132.9 102 72.5
AUR62005177 Chenopodium quinoa HOM05D003832 ORTHO05D004365 3.2e-29 132.5 166 47.0
Eucgr.E02530 Eucalyptus grandis HOM05D003832 ORTHO05D004365 5.5e-29 131.7 118 60.2
SGA_v2.0_scaffold14G07081 Striga asiatica HOM05D003832 ORTHO05D004365 3.9e-27 125.6 167 47.9
TAR626G0116 Trochodendron aralioides HOM05D003832 ORTHO05D004365 5.2e-27 125.2 133 51.9
MBI19_g45101_MAGBIO Magnolia biondii HOM05D003832 ORTHO05D004365 1.5e-26 123.6 250 34.4
QL07p021332 Quercus lobata HOM05D003832 ORTHO05D004365 8.2e-25 117.9 134 50.7
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 1.4e-24 117.1 126 48.4
SEGI_25137 Sequoiadendron giganteum HOM05D003832 ORTHO05D004365 1.4e-24 117.1 166 38.6
arahy.Tifrunner.gnm1.ann1.K6AR5W Arachis hypogaea HOM05D003832 ORTHO05D004365 5.3e-24 115.2 131 49.6
SMO164G0036 Selaginella moellendorffii HOM05D003832 ORTHO05D004365 7.0e-24 114.8 161 42.9
Eucgr.E02102 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.2e-23 114.0 125 55.2
arahy.Tifrunner.gnm1.ann1.S5DLTG Arachis hypogaea HOM05D003832 ORTHO05D004365 1.6e-23 113.6 122 50.8
CBR_g19929 Chara braunii HOM05D003832 ORTHO05D004365 1.6e-23 113.6 171 37.4
Cc02_g28310 Coffea canephora HOM05D003832 ORTHO05D004365 1.6e-23 113.6 173 42.2
Pp3c14_6040 Physcomitrium patens HOM05D003832 ORTHO05D004365 2.0e-23 113.2 185 37.3
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.0e-22 110.9 135 48.1
Thecc.09G186100 Theobroma cacao HOM05D003832 ORTHO05D004365 1.0e-22 110.9 121 51.2
SalBow5G0739 Salvia bowleyana HOM05D003832 ORTHO05D004365 1.3e-22 110.5 122 49.2
BcaC06g35194 Brassica carinata HOM05D003832 ORTHO05D004365 2.2e-22 109.8 165 43.6
FAN08G2334 Fragaria x ananassa HOM05D003832 ORTHO05D004365 3.8e-22 109.0 126 48.4
Gohir.D04G130600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 4.2e-21 105.5 124 50.0
Mapoly0047s0093 Marchantia polymorpha HOM05D003832 ORTHO05D004365 1.6e-20 103.6 173 38.2
PGSC0003DMG400022976 Solanum tuberosum HOM05D003832 ORTHO05D004365 1.6e-20 103.6 181 38.1
Gohir.A04G090600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 3.6e-20 102.4 117 48.7
Cc02_g28290 Coffea canephora HOM05D003832 ORTHO05D004365 4.0e-19 99.0 123 45.5
AUR62000790 Chenopodium quinoa HOM05D003832 ORTHO05D004365 5.2e-19 98.6 147 42.9
Ah.01g001730 Amaranthus hybridus HOM05D003832 ORTHO05D004365 2.0e-18 96.7 117 42.7
Eucgr.E02147 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.0e-18 96.7 104 55.8
Eucgr.E02142 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.6e-18 96.3 94 57.4
FAN22G0067 Fragaria x ananassa HOM05D003832 ORTHO05D004365 2.6e-18 96.3 118 45.8
Eucgr.E02175 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.8e-17 92.8 105 50.5
Lj5A749G38 Lonicera japonica HOM05D003832 ORTHO05D004365 3.7e-17 92.4 80 58.8
AUR62015080 Chenopodium quinoa HOM05D003832 ORTHO05D004365 8.3e-17 91.3 111 48.6
EL10Ac4g09389 Beta vulgaris HOM05D003832 ORTHO05D004365 1.4e-16 90.5 96 45.8
EL10Ac4g09380 Beta vulgaris HOM05D003832 ORTHO05D004365 4.1e-16 89.0 166 36.1
arahy.Tifrunner.gnm1.ann1.SNS3QW Arachis hypogaea HOM05D003832 ORTHO05D004365 7.0e-16 88.2 107 46.7
EL10Ac4g09383 Beta vulgaris HOM05D003832 ORTHO05D004365 7.0e-16 88.2 166 36.1
BolC9t57639H Brassica oleracea HOM05D003832 ORTHO05D004365 7.0e-16 88.2 161 39.1
BolC7t42388H Brassica oleracea HOM05D003832 ORTHO05D004365 9.1e-16 87.8 151 39.7
MCO05G158 Micromonas commoda HOM05D003832 ORTHO05D004365 7.7e-15 84.7 182 35.2
Eucgr.E02551 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.3e-14 84.0 111 47.7
MD16G1248500 Malus domestica HOM05D003832 ORTHO05D004365 2.9e-14 82.8 102 42.2
AagrBONN_evm.TU.Sc2ySwM_228.1832 Anthoceros agrestis HOM05D003832 ORTHO05D004365 3.2e-13 79.3 147 35.4
C07p18790 Brassica napus HOM05D003832 ORTHO05D004365 5.5e-13 78.6 183 33.3
FAN07G1538 Fragaria x ananassa HOM05D003811 ORTHO05D004470 5.5e-13 78.6 80 55.0
CARHR289090 Cardamine hirsuta HOM05D003832 ORTHO05D004365 4.0e-11 72.4 75 48.0
PRCOL_00000145 Prasinoderma coloniale HOM05D003832 ORTHO05D004365 1.2e-10 70.9 147 34.7
CARHR037820 Cardamine hirsuta HOM05D003832 ORTHO05D004365 9.8e-10 67.8 62 56.5
Haze_22022 Corylus avellana HOM05D003832 ORTHO05D004365 1.3e-09 67.4 77 50.6
C09p47960 Brassica napus HOM05D003832 ORTHO05D004365 1.7e-09 67.0 142 33.8
A07p42340 Brassica napus HOM05D003832 ORTHO05D004365 4.9e-09 65.5 99 40.4
Eucgr.E02600 Eucalyptus grandis HOM05D003832 ORTHO05D004365 4.9e-09 65.5 62 61.3
Os03g0321900 Oryza sativa ssp. japonica HOM05D003832 ORTHO05D004365 6.3e-09 65.1 58 53.4
A05p26850 Brassica napus HOM05D003832 ORTHO05D004365 8.3e-09 64.7 99 40.4
Haze_26440 Corylus avellana HOM05D003832 ORTHO05D004365 2.4e-08 63.2 161 32.3
Lsat_1_v5_gn_5_115440 Lactuca sativa HOM05D003832 ORTHO05D004365 9.1e-08 61.2 73 46.6
Eucgr.E02942 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.6e-07 60.5 72 51.4
Eucgr.E02248 Eucalyptus grandis HOM05D003832 ORTHO05D004365 3.5e-07 59.3 37 78.4
Eucgr.E02155 Eucalyptus grandis HOM05D003832 ORTHO05D004365 4.5e-07 58.9 35 74.3
Lj5A766G14 Lonicera japonica HOM05D003832 ORTHO05D004365 4.5e-07 58.9 145 31.7
CDE07G0789 Ceratophyllum demersum HOM05D001368 ORTHO05D003846 5.9e-07 58.5 74 40.5
Cc02_g28280 Coffea canephora HOM05D003832 ORTHO05D004365 2.9e-06 56.2 62 54.8
BcaC06g36546 Brassica carinata HOM05D003832 ORTHO05D004365 6.6e-06 55.1 162 30.2
BraA05t21564Z Brassica rapa HOM05D003832 ORTHO05D004365 6.6e-06 55.1 70 42.9
CSS0018468 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 8.6e-06 54.7 43 60.5
CSS0020950 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 8.6e-06 54.7 43 60.5


User provided reference genes

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