Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.2e-136 488.4 244 100.0
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.8e-108 394.8 312 69.6
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-107 392.1 312 69.2
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-106 390.2 265 80.4
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-106 390.2 312 68.9
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.4e-105 384.0 312 68.3
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.5e-98 361.7 263 75.7
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-92 343.6 311 62.7
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-91 339.0 302 64.6
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.9e-80 303.1 321 55.8
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.6e-79 300.1 318 56.9
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.8e-78 294.3 310 56.8
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 3.3e-77 292.4 335 52.2
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.3e-76 290.4 335 51.9
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 2.2e-76 289.7 317 55.2
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 2.8e-76 289.3 334 53.0
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 8.2e-76 287.7 315 54.3
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 3.1e-75 285.8 317 53.9
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 6.9e-75 284.6 329 53.2
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 4.5e-74 282.0 327 53.2
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.3e-73 280.4 283 58.0
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 5.0e-73 278.5 270 57.8
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 6.5e-73 278.1 270 57.0
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 8.5e-73 277.7 272 57.7
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 1.1e-72 277.3 272 57.4
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 1.1e-72 277.3 343 49.9
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 2.5e-72 276.2 330 52.4
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 9.4e-72 274.2 330 52.7
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.1e-71 273.1 324 50.3
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 2.7e-71 272.7 327 52.3
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 1.0e-70 270.8 317 51.1
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 1.4e-70 270.4 323 51.1
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-70 270.4 157 84.7
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 3.0e-70 269.2 317 50.8
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 5.1e-70 268.5 270 55.9
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 1.1e-69 267.3 319 51.4
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.5e-69 266.9 262 57.3
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 2.0e-69 266.5 319 50.5
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 3.3e-69 265.8 324 50.0
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 5.7e-69 265.0 318 50.3
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 1.3e-68 263.8 324 50.6
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 1.7e-68 263.5 323 50.2
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 1.8e-67 260.0 310 51.6
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.3e-67 258.5 154 82.5
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 7.0e-67 258.1 336 48.5
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 9.1e-67 257.7 330 48.8
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 2.6e-66 256.1 266 54.9
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.6e-66 256.1 326 49.4
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 2.6e-66 256.1 266 55.6
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 3.4e-66 255.8 272 53.7
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 3.4e-66 255.8 276 53.6
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 4.5e-66 255.4 327 49.8
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 4.5e-66 255.4 326 47.5
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 5.9e-66 255.0 270 54.8
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 1.0e-65 254.2 329 47.1
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 1.3e-65 253.8 334 49.1
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 5.0e-65 251.9 270 54.8
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 5.0e-65 251.9 288 54.5
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 8.5e-65 251.1 279 54.1
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.6e-63 246.9 307 48.9
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.6e-63 246.9 316 48.4
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 8.0e-63 244.6 208 61.5
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 3.0e-62 242.7 262 55.3
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 4.4e-61 238.8 278 50.0
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 6.3e-60 235.0 322 47.2
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.8e-59 233.4 291 49.5
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.8e-59 233.4 291 49.8
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 5.3e-59 231.9 325 46.8
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 9.1e-59 231.1 291 49.5
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.2e-58 230.7 287 49.5
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 4.5e-58 228.8 291 49.1
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.5e-58 228.8 238 58.4
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-56 224.2 276 53.3
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.5e-56 223.8 369 42.0
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 1.2e-55 220.7 321 44.5
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 2.1e-55 219.9 210 56.7
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 3.6e-55 219.2 285 46.7
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 8.8e-54 214.5 315 46.0
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 7.5e-53 211.5 359 42.3
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 3.7e-52 209.1 323 44.0
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 4.8e-52 208.8 246 50.0
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 5.3e-51 205.3 323 42.1
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 7.0e-51 204.9 301 46.2
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 7.0e-51 204.9 263 47.9
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 4.5e-50 202.2 299 46.5
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 4.5e-50 202.2 215 53.5
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 4.5e-50 202.2 235 52.3
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 5.9e-50 201.8 267 47.2
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 5.9e-50 201.8 286 45.8
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 5.0e-49 198.7 335 40.6
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 6.5e-49 198.4 301 43.5
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.5e-48 196.4 162 64.8
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.7e-47 193.0 205 58.0
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 1.3e-41 174.1 243 44.4
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 1.6e-39 167.2 157 56.7
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 2.3e-38 163.3 151 58.3
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 2.0e-37 160.2 114 71.1
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 3.7e-28 129.4 271 35.8
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 5.0e-25 119.0 231 34.6
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 9.8e-21 104.8 225 37.8
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.9e-16 90.5 201 31.3
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 3.1e-14 83.2 98 48.0
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 3.2e-11 73.2 126 40.5
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 3.9e-09 66.2 105 40.0
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.8e-06 57.4 111 45.0


User provided reference genes

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