Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-176 622.5 312 100.0
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.8e-172 607.1 312 96.8
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.1e-171 604.4 312 96.5
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.6e-170 600.9 312 96.8
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.7e-155 550.4 311 89.4
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-152 542.0 312 89.1
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.8e-135 484.6 310 81.0
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 3.8e-134 481.9 321 75.1
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 1.3e-131 473.4 335 72.8
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 8.7e-131 470.7 334 73.4
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 2.5e-130 469.2 335 72.2
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 1.6e-129 466.5 327 74.0
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 2.1e-129 466.1 318 75.8
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 8.2e-129 464.2 317 75.1
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 9.0e-128 460.7 315 74.0
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 1.0e-126 457.2 323 72.8
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 1.7e-126 456.4 330 73.3
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 2.2e-126 456.1 329 72.0
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 2.9e-126 455.7 330 72.4
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 5.0e-126 454.9 317 73.5
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 5.0e-126 454.9 323 72.4
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 6.5e-126 454.5 323 72.1
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 3.2e-125 452.2 327 72.8
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 3.6e-124 448.7 317 71.9
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 4.6e-124 448.4 324 70.4
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 4.6e-124 448.4 343 68.5
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 2.3e-123 446.0 318 73.6
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 3.9e-123 445.3 323 70.9
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 5.1e-123 444.9 314 72.0
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 8.7e-123 444.1 317 70.3
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 1.5e-122 443.4 317 70.3
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.6e-121 439.9 318 69.8
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 6.3e-121 438.0 319 70.8
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 1.1e-120 437.2 319 70.2
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 3.8e-118 428.7 327 67.9
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 8.5e-118 427.6 330 67.3
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 1.1e-117 427.2 324 68.2
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.1e-117 427.2 324 67.9
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 1.4e-117 426.8 323 68.1
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 1.9e-117 426.4 314 70.1
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 2.5e-117 426.0 323 67.8
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 4.2e-117 425.2 288 76.7
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 5.5e-117 424.9 325 68.9
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 2.1e-116 422.9 334 67.4
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 2.7e-116 422.5 326 66.3
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 6.1e-116 421.4 329 65.0
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 3.0e-115 419.1 326 66.9
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 2.0e-114 416.4 321 69.2
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.6e-114 416.0 266 81.6
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.3e-113 413.7 307 68.1
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.3e-113 413.7 316 67.4
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 3.7e-113 412.1 313 68.4
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.8e-113 411.8 303 70.6
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.4e-112 410.2 300 70.7
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.3e-112 408.3 312 73.1
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 2.5e-109 399.4 322 65.5
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 5.5e-109 398.3 369 58.5
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 7.2e-109 397.9 286 70.6
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 7.2e-109 397.9 321 65.1
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 3.6e-108 395.6 336 64.0
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 7.9e-108 394.4 291 69.4
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 3.9e-107 392.1 325 63.4
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.7e-107 391.3 312 68.9
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.0e-106 389.8 291 68.7
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 3.3e-106 389.0 291 68.0
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.4e-106 387.9 312 68.3
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 2.2e-105 386.3 321 62.9
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 2.6e-103 379.4 315 64.8
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 7.7e-103 377.9 313 63.9
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.7e-103 377.9 217 89.9
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 2.9e-102 375.9 289 69.2
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 2.9e-102 375.9 335 60.6
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 8.5e-102 374.4 316 62.7
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 3.0e-99 365.9 283 65.7
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.5e-98 363.6 359 57.7
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.2e-97 359.8 189 93.7
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 3.7e-97 359.0 267 67.8
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 3.7e-97 359.0 269 70.6
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.5e-95 352.4 298 66.8
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 5.9e-95 351.7 275 65.8
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 1.1e-93 347.4 320 60.9
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.3e-91 339.7 335 55.8
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 1.5e-90 337.0 210 78.1
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 5.7e-90 335.1 316 58.2
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 1.2e-87 327.4 224 73.7
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-86 322.8 177 89.8
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.1e-85 320.9 299 58.2
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 6.1e-84 315.1 328 54.9
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 8.0e-84 314.7 212 73.1
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 8.3e-81 304.7 313 56.2
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 7.8e-79 298.1 312 51.6
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 4.7e-76 288.9 217 68.7
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 1.1e-69 267.7 268 55.2
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 7.0e-64 248.4 178 72.5
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.6e-58 229.9 368 38.3
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 2.2e-57 226.9 170 70.0
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 8.1e-52 208.4 174 62.1
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 4.0e-51 206.1 163 66.3
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 4.0e-51 206.1 128 78.9
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 3.5e-47 193.0 263 40.7
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 6.9e-43 178.7 274 39.1
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.4e-40 171.0 283 39.6
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.1e-32 144.8 139 57.6
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 1.6e-28 131.0 246 36.2
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 6.2e-20 102.4 98 55.1
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 1.1e-19 101.7 93 59.1
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 1.2e-18 98.2 62 74.2
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 4.5e-18 96.3 94 58.5
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 1.5e-10 71.2 264 25.0
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.1e-07 60.8 41 65.9
BcaC05g25535 Brassica carinata HOM05D007396 ORTHO05D009228 1.0e-06 58.5 102 37.3
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.7e-06 55.8 91 37.4


User provided reference genes

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