Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.1e-163 577.4 289 100.0
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.5e-153 543.9 312 89.1
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.9e-152 541.2 312 89.1
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.9e-152 541.2 312 88.8
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.2e-151 537.0 312 88.8
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-137 493.4 298 85.2
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.9e-124 449.5 297 79.5
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 5.4e-119 431.4 321 70.1
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.7e-118 429.1 335 68.1
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 3.0e-117 425.6 335 67.8
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.6e-115 419.9 315 71.1
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 2.1e-115 419.5 333 68.5
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 1.8e-114 416.4 326 69.0
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 3.1e-114 415.6 327 67.0
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 5.3e-114 414.8 313 68.7
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 1.5e-113 413.3 328 68.9
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 5.8e-113 411.4 316 69.3
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.7e-112 409.8 315 67.3
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 2.9e-112 409.1 315 67.3
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 3.8e-112 408.7 314 68.5
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 8.4e-112 407.5 329 67.5
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 3.2e-111 405.6 316 66.8
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 5.4e-111 404.8 323 68.1
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 7.1e-111 404.4 323 67.8
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 9.3e-111 404.1 323 68.1
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 9.3e-111 404.1 326 67.8
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 6.0e-110 401.4 340 62.9
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 7.9e-110 401.0 316 66.8
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 6.7e-109 397.9 323 65.0
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 4.3e-108 395.2 314 67.2
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 4.3e-108 395.2 323 66.6
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 5.6e-108 394.8 317 68.5
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 6.2e-107 391.3 329 63.5
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 1.1e-106 390.6 319 65.8
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 2.4e-106 389.4 316 66.5
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 7.6e-105 384.4 324 63.6
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 7.6e-105 384.4 324 63.0
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 6.4e-104 381.3 309 65.4
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 1.4e-103 380.2 323 63.5
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.9e-103 379.8 324 63.0
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 2.5e-103 379.4 326 61.3
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 2.5e-103 379.4 328 60.1
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 3.2e-103 379.0 333 62.8
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 5.5e-103 378.3 286 71.3
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 9.3e-103 377.5 323 62.5
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 1.2e-102 377.1 325 63.1
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.6e-102 376.7 318 64.5
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 1.6e-102 376.7 326 62.3
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 2.3e-101 372.9 307 63.5
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 6.7e-101 371.3 302 65.9
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 6.7e-101 371.3 298 66.8
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.7e-101 370.9 256 77.0
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.5e-100 370.2 314 62.4
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.6e-99 366.7 324 61.1
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 1.4e-98 363.6 322 62.1
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.8e-97 358.2 203 92.1
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 7.6e-97 357.8 315 61.3
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.3e-96 357.1 335 60.3
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 2.2e-96 356.3 368 54.9
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.2e-96 356.3 291 64.9
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.4e-96 354.4 302 65.6
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 2.5e-95 352.8 291 64.6
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 7.1e-95 351.3 325 58.8
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.1e-95 351.3 304 66.8
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.7e-94 349.4 291 64.3
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.3e-93 347.1 291 63.2
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.1e-92 344.0 321 60.4
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 2.5e-92 342.8 315 61.0
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.3e-92 342.0 281 68.3
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-91 340.5 302 64.6
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 6.3e-91 338.2 311 59.8
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 3.1e-90 335.9 286 64.0
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 9.0e-90 334.3 313 57.5
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 4.5e-89 332.0 334 56.9
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 7.7e-89 331.3 279 62.7
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 4.6e-86 322.0 358 52.8
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 1.8e-85 320.1 317 57.7
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 1.1e-84 317.4 267 62.9
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 3.3e-84 315.8 267 64.4
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 5.9e-81 305.1 275 60.0
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.2e-80 303.1 332 50.6
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-78 296.6 189 81.5
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 6.1e-78 295.0 298 54.7
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 4.4e-76 288.9 222 66.7
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 6.3e-75 285.0 209 69.9
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 9.1e-74 281.2 297 53.2
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 5.5e-71 271.9 327 50.8
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 3.6e-70 269.2 304 49.7
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.3e-68 262.7 177 78.0
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 2.2e-67 260.0 312 51.9
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 3.7e-67 259.2 211 63.5
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 2.2e-64 250.0 214 62.6
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 3.5e-57 226.1 268 50.0
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 7.5e-52 208.4 363 36.4
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.4e-50 203.4 177 62.1
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 6.1e-46 188.7 152 66.4
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.0e-45 188.0 167 62.3
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.1e-42 177.9 260 42.3
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.4e-42 177.6 259 40.2
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 1.8e-42 177.2 171 56.1
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 8.0e-38 161.8 127 66.9
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 2.2e-35 153.7 270 36.7
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 6.6e-32 142.1 139 54.7
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 5.8e-28 129.0 246 34.6
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 7.6e-20 102.1 85 61.2
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 2.9e-19 100.1 93 58.1
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 1.1e-18 98.2 69 69.6
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 3.2e-18 96.7 94 59.6
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 5.1e-08 62.8 41 68.3
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 3.3e-07 60.1 115 36.5
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 3.6e-06 56.6 91 37.4


User provided reference genes

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