Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-33 146.7 117 100.0
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-31 139.8 119 95.8
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.8e-31 138.3 119 95.0
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.5e-30 135.6 124 91.9
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-23 112.5 96 89.6
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.0e-23 111.3 96 88.5
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.6e-23 110.9 96 85.4
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.3e-22 107.5 102 83.3
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-20 103.2 95 73.7
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 1.4e-17 93.2 84 72.6
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 2.1e-16 89.4 81 72.8
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.6e-16 88.2 82 52.4
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.3e-14 81.6 82 51.2
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.1e-13 79.3 75 54.7
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.6e-13 78.6 67 59.7
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.7e-13 78.2 76 55.3
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 6.2e-13 77.8 74 56.8
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 6.2e-13 77.8 89 48.3
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.1e-13 77.4 53 69.8
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.1e-13 77.4 53 69.8
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 1.1e-12 77.0 74 55.4
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.1e-12 77.0 67 56.7
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.4e-12 76.6 81 45.7
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.8e-12 76.3 70 54.3
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.8e-12 76.3 83 53.0
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 4.0e-12 75.1 82 63.4
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.2e-12 74.7 38 94.7
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.8e-12 74.3 83 47.0
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.5e-11 73.2 81 63.0
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 7.5e-11 70.9 89 47.2
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 1.3e-10 70.1 81 42.0
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-10 70.1 83 44.6
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 2.9e-10 68.9 52 59.6
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.9e-10 68.2 70 67.1
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 8.3e-10 67.4 81 59.3
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.1e-09 67.0 87 44.8
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.9e-09 66.2 38 78.9
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 2.4e-09 65.9 53 90.6
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 3.2e-09 65.5 66 80.3
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 3.2e-09 65.5 56 75.0
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.1e-09 65.1 54 61.1
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 4.1e-09 65.1 81 67.9
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 4.1e-09 65.1 71 70.4
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.4e-09 64.7 60 53.3
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.1e-09 64.3 76 44.7
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 1.2e-08 63.5 52 80.8
Sc20g0003610 Simmondsia chinensis HOM05D009547 ORTHO05D011610 1.2e-08 63.5 45 62.2
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 1.6e-08 63.2 40 70.0
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.6e-08 63.2 79 45.6
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.6e-08 63.2 55 61.8
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.1e-08 62.8 78 44.9
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 2.1e-08 62.8 84 44.0
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.7e-08 62.4 53 58.5
AUR62040594 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-08 62.0 45 60.0
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.5e-08 62.0 74 45.9
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.5e-08 62.0 68 72.1
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 6.0e-08 61.2 82 63.4
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 6.0e-08 61.2 84 58.3
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.0e-08 61.2 66 54.5
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 7.8e-08 60.8 88 40.9
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.0e-07 60.5 53 56.6
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.0e-07 60.5 81 43.2
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.0e-07 60.5 53 56.6
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 1.0e-07 60.5 80 61.2
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.0e-07 60.5 56 83.9
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.0e-07 60.5 66 53.0
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.3e-07 60.1 80 60.0
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.3e-07 60.1 55 76.4
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.7e-07 59.7 49 59.2
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 2.3e-07 59.3 54 79.6
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.0e-07 58.9 57 54.4
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 3.0e-07 58.9 88 59.1
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.0e-07 58.9 84 59.5
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 3.0e-07 58.9 54 55.6
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 3.9e-07 58.5 107 38.3
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 3.9e-07 58.5 80 42.5
Zm00001eb131480 Zea mays HOM05D036376 ORTHO05D002930 3.9e-07 58.5 53 86.8
Actinidia27492 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.1e-07 58.2 52 55.8
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 5.1e-07 58.2 55 58.2
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 6.6e-07 57.8 55 54.5
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 6.6e-07 57.8 48 64.6
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.6e-07 57.4 87 40.2
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 8.6e-07 57.4 87 40.2
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 1.1e-06 57.0 61 59.0
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.5e-06 56.6 81 39.5
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.5e-06 55.8 80 41.2
SMO277G0001 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 2.5e-06 55.8 53 56.6
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 4.3e-06 55.1 41 58.5
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 4.3e-06 55.1 50 52.0
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 5.6e-06 54.7 84 57.1
Glyma.16G166600 Glycine max HOM05D002879 ORTHO05D002930 5.6e-06 54.7 81 63.0
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 7.3e-06 54.3 81 56.8
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.3e-06 54.3 78 41.0
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.3e-06 54.3 52 53.8
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 9.5e-06 53.9 48 50.0
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.5e-06 53.9 55 45.5


User provided reference genes

Program Settings