Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.6e-36 154.1 90 100.0
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-22 109.8 95 77.9
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.2e-22 108.2 95 76.8
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.8e-21 104.0 102 72.5
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.1e-20 101.3 95 73.7
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 1.1e-19 100.1 70 71.4
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-19 99.4 102 70.6
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.6e-18 96.3 102 69.6
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.2e-18 94.4 102 68.6
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-17 93.6 72 69.4
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.5e-16 89.7 68 63.2
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 4.5e-16 88.2 67 67.2
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.8e-16 87.8 67 68.7
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-15 86.7 70 64.3
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.7e-15 86.3 68 61.8
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.9e-15 84.7 65 66.2
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.4e-15 84.0 67 64.2
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 1.4e-14 83.2 65 66.2
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.2e-13 80.1 62 67.7
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.6e-13 79.7 76 59.2
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-13 79.3 62 62.9
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 3.5e-13 78.6 66 65.2
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 4.6e-13 78.2 67 62.7
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 6.0e-13 77.8 70 61.4
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.9e-13 77.4 60 65.0
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.8e-12 76.3 61 65.6
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.8e-12 76.3 61 65.6
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.8e-12 76.3 40 92.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.1e-11 73.6 67 53.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.1e-11 73.6 53 69.8
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.9e-11 72.8 70 54.3
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 4.3e-11 71.6 73 53.4
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.3e-10 70.1 68 57.4
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 2.1e-10 69.3 75 49.3
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 2.1e-10 69.3 57 63.2
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.1e-10 69.3 70 52.9
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 2.1e-10 69.3 54 64.8
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 3.6e-10 68.6 51 64.7
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.8e-10 68.2 52 67.3
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 4.8e-10 68.2 69 55.1
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.8e-10 68.2 67 52.2
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 4.8e-10 68.2 52 65.4
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 6.2e-10 67.8 49 69.4
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 8.1e-10 67.4 53 60.4
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.1e-09 67.0 53 64.2
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.1e-09 67.0 53 64.2
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 3.1e-09 65.5 48 62.5
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.1e-09 65.5 66 53.0
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.0e-09 65.1 55 58.2
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.0e-09 65.1 55 60.0
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 4.0e-09 65.1 55 60.0
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 5.3e-09 64.7 67 55.2
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.9e-09 64.3 66 51.5
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 9.0e-09 63.9 55 61.8
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 1.2e-08 63.5 34 88.2
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 2.0e-08 62.8 51 60.8
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.0e-08 62.8 48 62.5
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 2.6e-08 62.4 50 62.0
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 3.4e-08 62.0 38 73.7
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 3.4e-08 62.0 51 58.8
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.4e-08 62.0 48 62.5
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 3.4e-08 62.0 48 62.5
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.4e-08 62.0 52 59.6
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.4e-08 62.0 48 62.5
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 5.8e-08 61.2 68 48.5
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 5.8e-08 61.2 47 59.6
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 9.9e-08 60.5 48 60.4
Sc20g0003610 Simmondsia chinensis HOM05D009547 ORTHO05D011610 1.3e-07 60.1 43 60.5
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-07 60.1 54 55.6
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.7e-07 59.7 48 62.5
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.7e-07 59.7 70 50.0
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.7e-07 59.7 47 61.7
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.7e-07 59.7 46 67.4
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-07 59.7 50 60.0
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.2e-07 59.3 48 60.4
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 3.8e-07 58.5 48 60.4
AUR62040594 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.8e-07 58.5 40 62.5
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.8e-07 58.5 52 55.8
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 3.8e-07 58.5 50 58.0
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.8e-07 58.5 45 64.4
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 4.9e-07 58.2 45 66.7
EL10Ac1g01574 Beta vulgaris HOM05D002879 ORTHO05D002930 6.4e-07 57.8 77 44.2
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 8.4e-07 57.4 54 51.9
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.4e-07 57.4 52 53.8
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 8.4e-07 57.4 62 51.6
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 8.4e-07 57.4 47 57.4
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.4e-07 57.4 50 58.0
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.1e-06 57.0 47 59.6
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.1e-06 57.0 71 46.5
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.1e-06 57.0 57 45.6
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-06 56.6 44 65.9
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.4e-06 56.6 48 58.3
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.9e-06 56.2 68 47.1
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.9e-06 56.2 47 57.4
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-06 56.2 44 63.6
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.9e-06 56.2 44 65.9
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.9e-06 56.2 49 59.2
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 2.4e-06 55.8 57 50.9
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.2e-06 55.5 47 61.7
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 3.2e-06 55.5 61 52.5
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.2e-06 55.1 37 67.6
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 5.5e-06 54.7 46 56.5
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 5.5e-06 54.7 56 51.8
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 5.5e-06 54.7 45 62.2
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.5e-06 54.7 56 50.0
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.5e-06 54.7 44 63.6
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 7.1e-06 54.3 38 60.5
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 7.1e-06 54.3 68 45.6
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.3e-06 53.9 52 51.9
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 9.3e-06 53.9 43 62.8


User provided reference genes

Program Settings