Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.7e-34 149.4 119 100.0
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.9e-34 147.9 119 99.2
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.7e-31 137.1 119 95.0
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-28 129.8 96 96.9
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-25 119.4 126 86.5
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.2e-25 118.2 126 85.7
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.6e-24 114.8 126 81.7
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.1e-23 111.3 102 83.3
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.7e-23 110.9 95 77.9
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 1.4e-17 93.2 84 72.6
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 2.1e-16 89.4 81 72.8
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.6e-16 88.2 82 52.4
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.3e-14 81.6 67 62.7
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.3e-14 81.6 82 51.2
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.4e-14 80.9 75 56.0
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-13 80.1 67 59.7
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 1.7e-13 79.7 90 48.9
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 2.2e-13 79.3 75 57.3
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.2e-13 79.3 70 57.1
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-13 79.0 53 71.7
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-13 79.0 53 71.7
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.8e-13 78.2 76 55.3
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 1.1e-12 77.0 74 55.4
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.4e-12 76.6 81 45.7
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.8e-12 76.3 38 97.4
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.8e-12 76.3 83 53.0
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 4.1e-12 75.1 82 63.4
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 6.9e-12 74.3 90 48.9
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.9e-12 74.3 83 47.0
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.5e-11 73.2 81 63.0
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 1.5e-11 73.2 81 44.4
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-10 70.1 83 44.6
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.8e-10 68.6 88 45.5
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 5.0e-10 68.2 70 67.1
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.5e-10 67.8 60 56.7
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 6.5e-10 67.8 52 57.7
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 1.4e-09 66.6 81 59.3
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 2.5e-09 65.9 53 90.6
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.5e-09 65.9 78 47.4
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.5e-09 65.9 76 46.1
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.5e-09 65.9 67 52.2
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 3.2e-09 65.5 66 80.3
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 4.2e-09 65.1 71 70.4
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 4.2e-09 65.1 56 75.0
Sc20g0003610 Simmondsia chinensis HOM05D009547 ORTHO05D011610 4.2e-09 65.1 45 64.4
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 5.5e-09 64.7 40 72.5
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 9.4e-09 63.9 88 43.2
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.2e-08 63.5 74 47.3
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.2e-08 63.5 54 59.3
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 1.2e-08 63.5 52 80.8
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.6e-08 63.2 79 45.6
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 2.1e-08 62.8 84 44.0
AUR62040594 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-08 62.0 45 60.0
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 3.6e-08 62.0 53 58.5
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.6e-08 62.0 68 72.1
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 4.7e-08 61.6 94 40.4
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 4.7e-08 61.6 80 45.0
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 4.7e-08 61.6 55 60.0
Zm00001eb131480 Zea mays HOM05D036376 ORTHO05D002930 4.7e-08 61.6 53 90.6
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 6.1e-08 61.2 82 63.4
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 6.1e-08 61.2 81 65.4
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 6.1e-08 61.2 84 58.3
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.1e-08 61.2 66 54.5
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 1.0e-07 60.5 80 61.2
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.0e-07 60.5 66 53.0
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-07 60.1 53 56.6
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-07 60.1 80 60.0
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-07 60.1 53 56.6
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.4e-07 60.1 55 76.4
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-07 60.1 56 83.9
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.8e-07 59.7 49 59.2
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 2.3e-07 59.3 54 79.6
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.0e-07 58.9 57 54.4
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 3.0e-07 58.9 90 60.0
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.0e-07 58.9 84 59.5
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 3.0e-07 58.9 54 55.6
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 5.1e-07 58.2 55 58.2
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 6.7e-07 57.8 84 39.3
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 6.7e-07 57.8 55 54.5
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.8e-07 57.4 87 40.2
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 8.8e-07 57.4 87 40.2
Actinidia27492 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.5e-06 56.6 52 53.8
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.5e-06 56.6 81 39.5
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 2.0e-06 56.2 84 58.3
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 2.0e-06 56.2 48 62.5
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 2.6e-06 55.8 81 58.0
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.6e-06 55.8 80 41.2
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.3e-06 55.5 78 42.3
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 3.3e-06 55.5 61 57.4
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 4.4e-06 55.1 92 37.0
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 4.4e-06 55.1 50 52.0
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 5.7e-06 54.7 88 56.8
Glyma.16G166600 Glycine max HOM05D002879 ORTHO05D002930 5.7e-06 54.7 81 63.0
Os01g0959200 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 7.4e-06 54.3 56 76.8
SMO277G0001 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 7.4e-06 54.3 53 54.7
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.4e-06 54.3 52 53.8
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.7e-06 53.9 55 45.5
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 9.7e-06 53.9 41 56.1
Zm00001eb243310 Zea mays HOM05D002879 ORTHO05D002930 9.7e-06 53.9 76 63.2


User provided reference genes

Program Settings