Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 5.7e-214 747.3 366 100.0
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 6.3e-213 743.8 366 99.5
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 6.2e-112 408.3 369 54.5
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 3.4e-110 402.5 370 53.5
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 1.6e-107 393.7 371 54.4
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 4.6e-107 392.1 368 53.0
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 1.5e-105 387.1 360 52.5
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 4.3e-105 385.6 370 52.7
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 1.3e-104 384.0 367 52.6
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 6.3e-104 381.7 363 51.2
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 8.2e-104 381.3 363 51.2
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 3.1e-103 379.4 367 50.7
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 1.0e-101 374.4 371 50.1
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 2.5e-97 359.8 368 48.1
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 5.7e-97 358.6 368 49.2
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 7.4e-97 358.2 366 50.5
GSVIVG01013644001 Vitis vinifera HOM05D008798 ORTHO05D011016 6.3e-96 355.1 375 47.2
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 9.4e-92 341.3 368 48.6
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 4.4e-89 332.4 365 45.8
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 7.4e-89 331.6 342 48.0
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 9.4e-84 314.7 355 47.3
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 1.7e-80 303.9 373 45.0
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 9.4e-76 288.1 373 41.8
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 8.2e-72 275.0 259 53.7
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 8.3e-64 248.4 369 38.5
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 2.2e-61 240.4 374 37.4
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 2.5e-60 236.9 262 44.3
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 8.0e-51 205.3 292 39.7
Hma1.2p1_1159F.1_g262420 Hydrangea macrophylla HOM05D008798 ORTHO05D011016 1.8e-47 194.1 196 51.5
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 7.5e-41 172.2 202 44.6
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 1.0e-37 161.8 365 31.8
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 1.9e-36 157.5 335 32.8
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.1e-34 151.8 342 29.5
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 6.8e-34 149.1 314 31.5
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.3e-32 144.8 342 29.2
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.1e-28 131.7 354 28.8
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 1.4e-26 124.8 353 27.5
Haze_05996 Corylus avellana HOM05D008798 ORTHO05D011016 2.0e-25 120.9 114 53.5
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 7.6e-25 119.0 105 53.3
CBR_g6349 Chara braunii HOM05D000186 ORTHO05D000347 4.7e-19 99.8 269 26.4
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 2.0e-17 94.4 181 33.1
Zm00001eb431530 Zea mays HOM05D008798 ORTHO05D011016 1.2e-14 85.1 98 49.0
ATR0168G001 Amborella trichopoda HOM05D008798 ORTHO05D011016 5.8e-09 66.2 48 60.4
MBI01_g35739_MAGBIO Magnolia biondii HOM05D008798 ORTHO05D000004 8.4e-08 62.4 48 52.1
BcaC07g42306 Brassica carinata HOM05D000488 ORTHO05D000347 2.4e-07 60.8 302 24.2
Sc24g0004330 Simmondsia chinensis HOM05D000186 ORTHO05D005094 3.2e-07 60.5 297 25.9
A09p68570 Brassica napus HOM05D000488 ORTHO05D000347 4.6e-06 56.6 302 22.8


User provided reference genes

Program Settings