Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01879 Eucalyptus grandis HOM05D002385 ORTHO05D002245 4.4e-59 231.5 154 100.0
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 1.3e-10 70.5 65 58.5
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 4.9e-10 68.6 65 56.9
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 3.2e-09 65.9 57 63.2
Sabra15G0137200 Salix brachista HOM05D012689 ORTHO05D002245 9.3e-09 64.3 59 61.0
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 2.1e-08 63.2 56 58.9
Dinv18438 Davidia involucrata HOM05D002385 ORTHO05D002245 2.7e-08 62.8 57 56.1
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 3.5e-08 62.4 60 60.0
Actinidia11006 Actinidia chinensis HOM05D002385 ORTHO05D002245 6.0e-08 61.6 56 58.9
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 6.0e-08 61.6 57 56.1
Aqoxy1G01477 Aquilegia oxysepala HOM05D002385 ORTHO05D002245 7.9e-08 61.2 63 52.4
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 7.9e-08 61.2 63 47.6
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 1.0e-07 60.8 66 47.0
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.0e-07 60.8 56 58.9
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 1.0e-07 60.8 64 56.2
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 1.3e-07 60.5 56 57.1
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 2.3e-07 59.7 56 60.7
COL.COLO4_07164 Corchorus olitorius HOM05D002385 ORTHO05D002245 3.0e-07 59.3 56 60.7
TAR627G0329 Trochodendron aralioides HOM05D002385 ORTHO05D002245 3.9e-07 58.9 56 60.7
Glyma.08G170700 Glycine max HOM05D002385 ORTHO05D002245 5.1e-07 58.5 69 49.3
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 5.1e-07 58.5 53 58.5
Haze_13594 Corylus avellana HOM05D002385 ORTHO05D002245 6.7e-07 58.2 57 56.1
Glyma.15G256300 Glycine max HOM05D002385 ORTHO05D002245 6.7e-07 58.2 69 47.8
Glyma.15G256200 Glycine max HOM05D002385 ORTHO05D002245 8.7e-07 57.8 54 53.7
Rhsim06G0138200 Rhododendron simsii HOM05D002385 ORTHO05D002245 8.7e-07 57.8 63 57.1
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 8.7e-07 57.8 55 56.4
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.1e-06 57.4 70 48.6
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.1e-06 57.4 70 48.6
GSVIVG01015780001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.1e-06 57.4 64 51.6
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.5e-06 57.0 55 50.9
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 1.5e-06 57.0 57 57.9
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.9e-06 56.6 55 50.9
ClCG11G016780 Citrullus lanatus HOM05D002385 ORTHO05D002245 1.9e-06 56.6 53 58.5
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.9e-06 56.6 56 50.0
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.5e-06 56.2 50 56.0
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 2.5e-06 56.2 57 50.9
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 2.5e-06 56.2 57 50.9
Haze_13597 Corylus avellana HOM05D002385 ORTHO05D002245 2.5e-06 56.2 58 56.9
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 2.5e-06 56.2 70 50.0
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 2.5e-06 56.2 66 51.5
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 3.3e-06 55.8 56 44.6
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 3.3e-06 55.8 56 44.6
Lj3g0007335 Lotus japonicus HOM05D002385 ORTHO05D002245 3.3e-06 55.8 63 50.8
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 3.3e-06 55.8 71 50.7
vmacro12336 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 3.3e-06 55.8 50 56.0
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 3.3e-06 55.8 64 53.1
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 3.3e-06 55.8 64 53.1
A01p32930 Brassica napus HOM05D002385 ORTHO05D002245 4.3e-06 55.5 57 49.1
BraA01t03414Z Brassica rapa HOM05D002385 ORTHO05D002245 4.3e-06 55.5 57 49.1
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 4.3e-06 55.5 57 57.9
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 4.3e-06 55.5 57 57.9
RcHm_v2.0_Chr2g0114501 Rosa chinensis HOM05D002385 ORTHO05D002245 4.3e-06 55.5 58 50.0
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 5.6e-06 55.1 57 57.9
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 5.6e-06 55.1 66 43.9
Phvul.005G057500 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 5.6e-06 55.1 50 56.0
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 5.6e-06 55.1 54 48.1
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 7.4e-06 54.7 53 56.6
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 7.4e-06 54.7 56 50.0
Lsat_1_v5_gn_1_82281 Lactuca sativa HOM05D019240 ORTHO05D002245 7.4e-06 54.7 63 46.0
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 7.4e-06 54.7 60 56.7
Dinv05962 Davidia involucrata HOM05D014462 ORTHO05D018947 9.6e-06 54.3 58 46.6
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 9.6e-06 54.3 56 57.1
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 9.6e-06 54.3 59 55.9
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 9.6e-06 54.3 70 41.4
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 9.6e-06 54.3 56 57.1


User provided reference genes

Program Settings