Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01871 Eucalyptus grandis HOM05D012433 ORTHO05D007072 6.2e-211 737.3 384 100.0
Eucgr.E01852 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.1e-77 293.1 304 56.9
Eucgr.E01860 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.8e-76 288.9 304 56.6
Eucgr.E01836 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.9e-75 285.8 300 57.0
Eucgr.E01865 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.6e-62 243.0 302 50.3
Eucgr.E01810 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-58 230.7 294 49.3
Eucgr.J01320 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.7e-48 195.3 300 42.3
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-45 188.3 325 43.4
Eucgr.E01811 Eucalyptus grandis HOM05D012433 ORTHO05D007072 2.6e-44 183.7 195 53.8
Eucgr.J01296 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.5e-44 183.0 301 42.5
Eucgr.E01863 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-43 181.0 331 41.7
Eucgr.J01308 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.5e-41 173.3 385 36.1
Eucgr.J01324 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-40 171.4 316 39.6
Eucgr.J01303 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.2e-38 162.2 348 36.2
Eucgr.L01409 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.5e-36 156.4 355 36.3
Eucgr.E01797 Eucalyptus grandis HOM05D000005 ORTHO05D007073 8.5e-35 152.1 297 38.0
Eucgr.E01807 Eucalyptus grandis HOM05D000005 ORTHO05D007073 6.1e-33 146.0 302 37.7
Eucgr.L01406 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.1e-33 146.0 308 36.0
Eucgr.J01336 Eucalyptus grandis HOM05D000005 ORTHO05D011459 2.8e-30 137.1 358 34.1
Eucgr.J01330 Eucalyptus grandis HOM05D000005 ORTHO05D007072 6.9e-29 132.5 366 33.6
Eucgr.J01298 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.0e-28 131.0 303 37.0
PGR142G4263 Punica granatum HOM05D000005 ORTHO05D000012 2.3e-24 117.5 349 30.1
Eucgr.J01315 Eucalyptus grandis HOM05D018689 ORTHO05D029333 2.2e-22 110.9 233 37.8
Eucgr.C02041 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.8e-21 107.8 319 29.8
Eucgr.C01921 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.9e-19 100.5 268 32.1
Eucgr.H03723 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.5e-19 99.4 372 30.4
Eucgr.C02087 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.1e-18 98.6 351 31.1
Eucgr.J01301 Eucalyptus grandis HOM05D000005 ORTHO05D007073 1.9e-18 97.8 350 30.9
Eucgr.H03796 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.5e-18 97.4 215 37.7
Eucgr.H03847 Eucalyptus grandis HOM05D000005 ORTHO05D007073 2.5e-18 97.4 211 37.0
Eucgr.E01855 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.2e-18 97.1 97 58.8
Eucgr.H03694 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.2e-18 97.1 334 33.2
Eucgr.H03746 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.2e-18 95.9 382 30.4
Eucgr.C02044 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.4e-18 95.5 273 30.0
Eucgr.H03827 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.6e-17 94.7 342 29.5
Eucgr.C02110 Eucalyptus grandis HOM05D000005 ORTHO05D007073 2.1e-17 94.4 280 32.5
Eucgr.C01952 Eucalyptus grandis HOM05D012433 ORTHO05D017911 4.7e-17 93.2 216 31.9
Eucgr.H03679 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.7e-17 93.2 292 34.2
Eucgr.H03707 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.8e-16 91.3 215 38.1
Eucgr.H03735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.3e-16 90.9 384 28.6
PGR142G3725 Punica granatum HOM05D000005 ORTHO05D000012 5.2e-16 89.7 307 28.7
Eucgr.H03528 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.1e-15 88.6 240 35.8
Eucgr.H03745 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.6e-15 87.4 396 29.3
Eucgr.H03738 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.7e-15 86.3 300 31.0
Eucgr.B01756 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.4e-15 85.9 355 28.5
Eucgr.C02631 Eucalyptus grandis HOM05D012617 ORTHO05D007072 1.7e-14 84.7 289 29.1
PGR142G1159 Punica granatum HOM05D000005 ORTHO05D017912 1.7e-14 84.7 304 29.9
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-14 84.3 202 32.7
Eucgr.D00746 Eucalyptus grandis HOM05D012433 ORTHO05D017911 4.8e-14 83.2 302 28.5
PGR142G2658 Punica granatum HOM05D000005 ORTHO05D007072 8.2e-14 82.4 263 31.2
Eucgr.H03741 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.4e-13 81.6 217 35.9
Eucgr.C02112 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.1e-13 80.5 288 29.2
Eucgr.L03006 Eucalyptus grandis HOM05D012433 ORTHO05D017911 5.3e-13 79.7 253 31.6
Eucgr.C01950 Eucalyptus grandis HOM05D012433 ORTHO05D007073 9.1e-13 79.0 196 31.1
PGR142G0294 Punica granatum HOM05D000005 ORTHO05D000012 9.1e-13 79.0 318 28.3
Eucgr.L01460 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.2e-12 78.6 380 26.6
PGR142G1752 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-12 77.8 311 26.4
Carub.0007s2209 Capsella rubella HOM05D003506 ORTHO05D004063 2.6e-12 77.4 296 28.0
Eucgr.H03785 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.5e-12 76.6 234 32.9
Eucgr.H03809 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.7e-12 75.9 206 33.0
PGR142G0579 Punica granatum HOM05D000005 ORTHO05D000012 7.7e-12 75.9 214 29.9
Eucgr.H03761 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.0e-11 75.5 238 32.8
Eucgr.C02088 Eucalyptus grandis HOM05D012617 ORTHO05D007072 2.9e-11 73.9 232 31.0
Eucgr.H03699 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.0e-11 73.2 221 33.0
Eucgr.D00736 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.5e-11 72.8 261 27.6
Eucgr.C03970 Eucalyptus grandis HOM05D000005 ORTHO05D194797 8.5e-11 72.4 309 26.9
Eucgr.C04271 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.5e-10 71.6 317 28.7
Eucgr.F03913 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.5e-10 71.6 249 31.7
AL7G35050 Arabidopsis lyrata HOM05D003506 ORTHO05D004063 1.9e-10 71.2 293 28.0
Eucgr.C01654 Eucalyptus grandis HOM05D000005 ORTHO05D017911 1.9e-10 71.2 159 36.5
Eucgr.H03750 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.9e-10 71.2 194 29.9
Eucgr.C01968 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.5e-10 70.9 254 28.3
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 2.5e-10 70.9 299 28.8
PGR042G2042 Punica granatum HOM05D003506 ORTHO05D004063 4.2e-10 70.1 312 27.6
PGR102G0684 Punica granatum HOM05D000005 ORTHO05D007072 4.2e-10 70.1 252 29.4
Eucgr.C02649 Eucalyptus grandis HOM05D000005 ORTHO05D017912 5.5e-10 69.7 375 29.6
Eucgr.L01871 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.5e-10 69.7 253 28.5
PGR004G1357 Punica granatum HOM05D018689 ORTHO05D007072 5.5e-10 69.7 287 26.8
Eucgr.C02646 Eucalyptus grandis HOM05D000005 ORTHO05D007072 7.2e-10 69.3 305 28.2
Eucgr.H03790 Eucalyptus grandis HOM05D000005 ORTHO05D007072 9.4e-10 68.9 299 29.4
Eucgr.C01957 Eucalyptus grandis HOM05D012433 ORTHO05D017911 1.6e-09 68.2 281 27.0
Sp7g24110 Schrenkiella parvula HOM05D000101 ORTHO05D000089 1.6e-09 68.2 346 27.2
PGR102G0126 Punica granatum HOM05D000005 ORTHO05D007072 2.7e-09 67.4 367 27.2
PGR142G4010 Punica granatum HOM05D000005 ORTHO05D000012 2.7e-09 67.4 188 28.7
PGR142G4482 Punica granatum HOM05D000005 ORTHO05D007073 2.7e-09 67.4 216 29.2
Eucgr.C02055 Eucalyptus grandis HOM05D018689 ORTHO05D007072 3.6e-09 67.0 316 23.7
HanXRQChr08g0210051 Helianthus annuus HOM05D000005 ORTHO05D000012 3.6e-09 67.0 294 27.6
Eucgr.D01599 Eucalyptus grandis HOM05D000005 ORTHO05D011459 4.7e-09 66.6 221 31.7
PGR102G2734 Punica granatum HOM05D000005 ORTHO05D000012 4.7e-09 66.6 167 32.3
Eucgr.C01486 Eucalyptus grandis HOM05D016032 ORTHO05D007072 6.1e-09 66.2 291 26.1
Eucgr.C02040 Eucalyptus grandis HOM05D000005 ORTHO05D007072 8.0e-09 65.9 195 29.2
Eucgr.C00572 Eucalyptus grandis HOM05D016032 ORTHO05D007072 1.0e-08 65.5 358 23.2
Eucgr.C02056 Eucalyptus grandis HOM05D000005 ORTHO05D007072 1.0e-08 65.5 178 33.1
PGR004G0619 Punica granatum HOM05D017779 ORTHO05D007072 1.0e-08 65.5 291 28.5
PGR065G0009 Punica granatum HOM05D017779 ORTHO05D007072 1.0e-08 65.5 291 28.5
Medtr4g014280 Medicago truncatula HOM05D000005 ORTHO05D000012 1.4e-08 65.1 194 29.9
PGR142G0894 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-08 65.1 133 36.8
Actinidia19992 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.8e-08 64.7 346 28.0
Medtr8g018040 Medicago truncatula HOM05D000005 ORTHO05D000012 1.8e-08 64.7 314 22.0
PGR004G2074 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-08 64.7 212 28.8
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-08 64.7 106 38.7
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-08 64.7 117 41.9
PGR142G4214 Punica granatum HOM05D000005 ORTHO05D000012 1.8e-08 64.7 305 28.5
QL05p008421 Quercus lobata HOM05D000005 ORTHO05D000012 1.8e-08 64.7 310 26.1
CiPaw.15G120400 Carya illinoinensis HOM05D000005 ORTHO05D000012 2.3e-08 64.3 301 24.9
Ca_23602_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 2.3e-08 64.3 339 24.8
MD17G1275900 Malus domestica HOM05D000005 ORTHO05D000012 2.3e-08 64.3 314 26.4
Eucgr.H03807 Eucalyptus grandis HOM05D017779 ORTHO05D007072 4.0e-08 63.5 158 33.5
MD15G1104000 Malus domestica HOM05D000005 ORTHO05D000012 4.0e-08 63.5 371 25.9
RcHm_v2.0_Chr2g0106561 Rosa chinensis HOM05D000005 ORTHO05D012233 4.0e-08 63.5 162 32.7
Duzib268G0652 Durio zibethinus HOM05D000005 ORTHO05D000012 5.2e-08 63.2 200 31.5
Eucgr.G00367 Eucalyptus grandis HOM05D000005 ORTHO05D007072 5.2e-08 63.2 126 39.7
AT4G19050 Arabidopsis thaliana HOM05D003506 ORTHO05D004063 6.7e-08 62.8 288 25.3
Eucgr.C01662 Eucalyptus grandis HOM05D012433 ORTHO05D017911 8.8e-08 62.4 228 28.5
FAN10G3445 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.8e-08 62.4 380 26.8
MD07G1260700 Malus domestica HOM05D003506 ORTHO05D000012 8.8e-08 62.4 281 27.8
PGR102G0526 Punica granatum HOM05D000005 ORTHO05D000012 8.8e-08 62.4 160 31.9
FvH4_7g32464 Fragaria vesca HOM05D000005 ORTHO05D000012 1.2e-07 62.0 292 28.1
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 1.5e-07 61.6 245 29.8
Solyc11g011350.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 2.0e-07 61.2 425 24.9
TPR.G5234 Trifolium pratense HOM05D000005 ORTHO05D000012 2.0e-07 61.2 162 30.2
CiPaw.15G157400 Carya illinoinensis HOM05D000005 ORTHO05D000012 2.6e-07 60.8 297 27.6
ECA246G1384 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.6e-07 60.8 296 26.7
Eucgr.G02264 Eucalyptus grandis HOM05D000005 ORTHO05D007073 2.6e-07 60.8 285 27.7
PGR044G0625 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-07 60.8 306 24.8
PGR063G0003 Punica granatum HOM05D017779 ORTHO05D007072 2.6e-07 60.8 188 33.5
QL09p004171 Quercus lobata HOM05D000005 ORTHO05D001748 2.6e-07 60.8 291 28.5
CARHR254250 Cardamine hirsuta HOM05D000005 ORTHO05D000012 3.3e-07 60.5 281 25.6
Eucgr.C03961 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.4e-07 60.1 221 28.1
Thhalv10024353m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 4.4e-07 60.1 384 25.5
THA.LOC104806185 Tarenaya hassleriana HOM05D003506 ORTHO05D004063 4.4e-07 60.1 154 31.2
FvH4_7g32460 Fragaria vesca HOM05D000005 ORTHO05D000012 5.7e-07 59.7 286 28.0
Gohir.D11G295500 Gossypium hirsutum HOM05D000005 ORTHO05D000012 5.7e-07 59.7 295 29.2
MD17G1275400 Malus domestica HOM05D000005 ORTHO05D000012 5.7e-07 59.7 285 27.0
THA.LOC104827550 Tarenaya hassleriana HOM05D000005 ORTHO05D000012 5.7e-07 59.7 332 26.2
CSS0027623 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 7.5e-07 59.3 309 23.6
Eucgr.C02072 Eucalyptus grandis HOM05D012617 ORTHO05D007072 7.5e-07 59.3 243 26.7
MD08G1230100 Malus domestica HOM05D003506 ORTHO05D000012 7.5e-07 59.3 233 27.5
Nn1g09534 Nelumbo nucifera HOM05D000005 ORTHO05D000012 7.5e-07 59.3 229 29.3
AL8G13790 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 9.7e-07 58.9 267 27.7
Eucgr.C04268 Eucalyptus grandis HOM05D000005 ORTHO05D035199 9.7e-07 58.9 203 30.0
Eucgr.D01587 Eucalyptus grandis HOM05D000005 ORTHO05D011459 9.7e-07 58.9 141 34.0
Eucgr.K02295 Eucalyptus grandis HOM05D019435 ORTHO05D007072 9.7e-07 58.9 221 29.9
HanXRQChr13g0411671 Helianthus annuus HOM05D000005 ORTHO05D000012 9.7e-07 58.9 318 24.8
PGR044G2537 Punica granatum HOM05D000005 ORTHO05D000012 9.7e-07 58.9 243 28.4
Gorai.007G319000 Gossypium raimondii HOM05D000005 ORTHO05D000012 1.3e-06 58.5 292 28.4
ECA233G2599 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.7e-06 58.2 288 27.8
Eucgr.C03957 Eucalyptus grandis HOM05D000005 ORTHO05D193097 1.7e-06 58.2 328 26.5
MBI11_g25848_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.7e-06 58.2 283 25.4
Medtr4g013375 Medicago truncatula HOM05D000005 ORTHO05D000012 1.7e-06 58.2 166 33.1
Eucgr.G00362 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.2e-06 57.8 122 38.5
Lju50C35G4 Lonicera japonica HOM05D007424 ORTHO05D001748 2.2e-06 57.8 314 25.5
MD02G1031800 Malus domestica HOM05D000005 ORTHO05D000012 2.2e-06 57.8 331 25.1
PGR142G1218 Punica granatum HOM05D000005 ORTHO05D000012 2.2e-06 57.8 233 25.8
AT5G36930 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 2.8e-06 57.4 337 26.7
CARHR176610 Cardamine hirsuta HOM05D003506 ORTHO05D004063 2.8e-06 57.4 398 23.6
Eucgr.H02212 Eucalyptus grandis HOM05D000005 ORTHO05D007072 2.8e-06 57.4 315 27.0
FAN06G4676 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.8e-06 57.4 276 23.9
MBI11_g07701_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.8e-06 57.4 283 25.8
SEGI_04007 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.8e-06 57.4 297 24.2
CiPaw.15G158600 Carya illinoinensis HOM05D000005 ORTHO05D000012 3.7e-06 57.0 297 26.9
Duzib211G0251 Durio zibethinus HOM05D000005 ORTHO05D000012 3.7e-06 57.0 329 21.9
Eucgr.C02067 Eucalyptus grandis HOM05D000005 ORTHO05D007072 3.7e-06 57.0 146 30.8
FvH4_7g33140 Fragaria vesca HOM05D000005 ORTHO05D000012 3.7e-06 57.0 266 26.7
MD01G1190100 Malus domestica HOM05D000005 ORTHO05D000012 3.7e-06 57.0 238 31.1
QL06p010273 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-06 57.0 298 26.5
Sp7g17770 Schrenkiella parvula HOM05D003506 ORTHO05D004063 3.7e-06 57.0 167 27.5
CiPaw.15G159000 Carya illinoinensis HOM05D000005 ORTHO05D000012 4.8e-06 56.6 326 25.5
Duzib160G0713 Durio zibethinus HOM05D000005 ORTHO05D000012 4.8e-06 56.6 289 26.6
Migut.G01041 Erythranthe guttata HOM05D000101 ORTHO05D002559 4.8e-06 56.6 162 34.6
Gohir.D11G295200 Gossypium hirsutum HOM05D000005 ORTHO05D000012 4.8e-06 56.6 297 24.6
MBI11_g25856_MAGBIO Magnolia biondii HOM05D001013 ORTHO05D001703 4.8e-06 56.6 244 28.3
Duzib213G0233 Durio zibethinus HOM05D000005 ORTHO05D000012 6.3e-06 56.2 100 31.0
Nn8g41080 Nelumbo nucifera HOM05D000005 ORTHO05D000012 6.3e-06 56.2 240 27.9
PGR142G3653 Punica granatum HOM05D000005 ORTHO05D007072 6.3e-06 56.2 137 32.1
QL05p000463 Quercus lobata HOM05D000005 ORTHO05D000012 6.3e-06 56.2 296 25.3
RcHm_v2.0_Chr4g0386681 Rosa chinensis HOM05D000005 ORTHO05D000012 6.3e-06 56.2 359 23.7
SEGI_25393 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.3e-06 56.2 316 23.4
AL7G26890 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 8.2e-06 55.8 343 27.1
AL8G13620 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 8.2e-06 55.8 334 24.0
CARHR177200 Cardamine hirsuta HOM05D000005 ORTHO05D000012 8.2e-06 55.8 267 25.1
FvH4_3g33030 Fragaria vesca HOM05D000005 ORTHO05D000012 8.2e-06 55.8 280 25.4
HanXRQChr04g0098541 Helianthus annuus HOM05D000005 ORTHO05D000012 8.2e-06 55.8 237 32.1
Medtr4g014320 Medicago truncatula HOM05D000005 ORTHO05D000012 8.2e-06 55.8 114 34.2
QL01p031834 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 55.8 115 37.4
QL10p051095 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 55.8 254 26.4
TPR.G27685 Trifolium pratense HOM05D000005 ORTHO05D000012 8.2e-06 55.8 285 25.6


User provided reference genes

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