Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.0e-170 601.7 286 100.0
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.7e-125 453.0 249 88.0
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 3.9e-109 398.7 283 67.8
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.5e-108 396.0 299 64.2
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 3.3e-108 395.6 249 73.1
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 7.3e-108 394.4 253 71.5
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 7.3e-108 394.4 249 72.7
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 1.6e-107 393.3 249 71.5
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 6.2e-107 391.3 258 71.3
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 2.3e-106 389.4 249 72.7
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 8.9e-106 387.5 249 71.9
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.2e-105 387.1 248 71.4
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 2.0e-105 386.3 249 70.7
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.0e-105 386.3 249 70.7
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.4e-105 385.2 249 70.3
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 5.8e-105 384.8 252 71.8
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 7.5e-105 384.4 249 72.3
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 9.8e-105 384.0 249 69.9
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 2.2e-104 382.9 252 70.2
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 2.9e-104 382.5 249 70.3
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 4.9e-104 381.7 249 71.9
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 8.3e-104 380.9 249 72.3
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 1.1e-103 380.6 290 61.7
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 1.4e-103 380.2 249 71.1
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.9e-103 379.8 249 71.1
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 1.9e-103 379.8 283 65.7
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 3.2e-103 379.0 301 61.1
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 4.1e-103 378.6 248 71.0
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 4.1e-103 378.6 249 71.5
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 7.1e-103 377.9 250 70.4
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 7.1e-103 377.9 250 72.4
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 1.2e-102 377.1 252 70.2
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 1.6e-102 376.7 259 68.3
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 1.6e-102 376.7 250 71.2
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.6e-102 376.7 250 71.6
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.6e-102 376.7 250 71.6
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 2.1e-102 376.3 249 70.3
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.7e-102 375.9 283 65.4
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 7.8e-102 374.4 249 69.5
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 7.8e-102 374.4 249 70.7
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 7.8e-102 374.4 249 70.7
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.3e-101 373.6 249 69.9
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 2.3e-101 372.9 252 69.0
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 2.3e-101 372.9 248 69.8
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.3e-101 372.9 283 65.0
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 3.9e-101 372.1 283 63.6
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 6.6e-101 371.3 249 71.1
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 1.5e-100 370.2 255 69.0
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 1.9e-100 369.8 270 65.6
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 3.3e-100 369.0 283 63.3
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 4.3e-100 368.6 249 67.9
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 7.3e-100 367.9 247 69.6
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 9.5e-100 367.5 249 69.1
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 9.5e-100 367.5 292 61.3
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 2.1e-99 366.3 252 67.5
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 3.6e-99 365.5 249 67.9
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 4.7e-99 365.2 262 66.4
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 4.7e-99 365.2 249 68.7
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 6.2e-99 364.8 260 67.7
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 1.1e-98 364.0 283 62.5
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 1.1e-98 364.0 249 68.3
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 1.1e-98 364.0 268 65.7
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 1.8e-98 363.2 265 65.7
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 1.8e-98 363.2 249 68.3
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 1.8e-98 363.2 249 68.3
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 1.8e-98 363.2 283 62.9
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 1.8e-98 363.2 249 68.3
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 3.1e-98 362.5 248 66.9
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 4.0e-98 362.1 249 67.9
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 4.0e-98 362.1 289 61.9
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 6.8e-98 361.3 283 61.8
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 6.8e-98 361.3 249 67.5
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 6.8e-98 361.3 249 69.5
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 8.9e-98 360.9 249 67.9
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 8.9e-98 360.9 273 62.6
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 1.2e-97 360.5 305 59.3
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 1.2e-97 360.5 252 66.7
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 2.0e-97 359.8 249 67.5
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 2.0e-97 359.8 249 67.5
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 2.0e-97 359.8 249 67.5
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.0e-97 359.8 249 69.1
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.0e-97 359.8 249 69.1
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 2.6e-97 359.4 283 62.5
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.6e-97 359.4 248 67.3
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 3.4e-97 359.0 254 66.1
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 3.4e-97 359.0 254 66.1
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 7.6e-97 357.8 283 62.2
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 7.6e-97 357.8 249 65.9
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 7.6e-97 357.8 251 66.1
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 9.9e-97 357.5 248 66.9
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 1.7e-96 356.7 248 66.5
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 1.7e-96 356.7 251 66.9
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 2.2e-96 356.3 283 62.2
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 3.7e-96 355.5 248 67.3
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 3.7e-96 355.5 249 65.5
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 4.9e-96 355.1 283 61.5
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 4.9e-96 355.1 248 66.9
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 6.4e-96 354.8 244 68.0
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 1.1e-95 354.0 283 61.5
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 1.4e-95 353.6 285 60.7
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 1.4e-95 353.6 285 60.7
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 1.4e-95 353.6 197 81.2
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 2.4e-95 352.8 248 66.1
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 2.4e-95 352.8 249 64.7
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 1.6e-94 350.1 283 60.8
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 3.5e-94 349.0 249 64.7
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 7.8e-94 347.8 271 60.1
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 3.0e-93 345.9 242 67.4
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 3.0e-93 345.9 242 67.4
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 6.6e-93 344.7 278 60.4
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 1.1e-92 344.0 296 59.1
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 3.3e-92 342.4 252 63.9
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 1.8e-90 336.7 250 61.2
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 1.8e-90 336.7 229 69.0
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 5.2e-90 335.1 196 78.1
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.6e-89 332.8 227 67.8
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.4e-89 332.0 226 69.0
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.4e-89 332.0 226 69.0
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 6.0e-86 321.6 290 57.6
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 3.0e-85 319.3 372 46.0
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 3.9e-85 318.9 255 61.6
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 6.6e-85 318.2 299 53.8
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 9.6e-84 314.3 199 71.4
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 1.8e-82 310.1 210 70.0
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 3.8e-80 302.4 252 58.7
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 3.8e-80 302.4 249 55.0
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 1.2e-78 297.4 245 58.0
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 1.2e-78 297.4 249 59.0
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 7.9e-78 294.7 282 52.8
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 7.9e-78 294.7 249 59.0
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 3.3e-76 289.3 250 56.4
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 2.1e-70 270.0 284 51.8
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 6.0e-70 268.5 171 72.5
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 1.9e-68 263.5 174 71.8
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 4.8e-59 232.3 248 46.0
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 7.6e-57 224.9 244 49.6
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 3.2e-55 219.5 244 46.3
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.9e-48 196.4 177 55.4
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.6e-41 173.3 127 64.6
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 8.5e-40 168.3 81 98.8
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 3.9e-37 159.5 92 79.3
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 1.3e-24 117.9 77 71.4
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 1.3e-19 101.3 96 52.1
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 1.7e-19 100.9 108 49.1
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 7.7e-17 92.0 93 48.4
Eucgr.E04335 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.4e-13 81.3 46 87.0
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 5.2e-13 79.3 53 66.0
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.1e-10 71.6 44 68.2
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 3.5e-09 66.6 48 64.6
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 1.7e-08 64.3 55 60.0
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 2.9e-08 63.5 30 86.7


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